RNA–Protein interactions for RNA: ENST00000587275.1

U2AF2-204, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

TSL 4

Gene U2AF2, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-204ENST00000587275 NIT2Q9NQR4 276 aa12.74□□□□□ -0.37
U2AF2-204ENST00000587275 MEF2BQ02080 365 aaPredicted RBP12.73□□□□□ -0.37
U2AF2-204ENST00000587275 IGHV3-64A0A075B6Q5 118 aa12.72□□□□□ -0.37
U2AF2-204ENST00000587275 TRAV26-2A0A0B4J265 109 aa12.72□□□□□ -0.37
U2AF2-204ENST00000587275 GATD1Q8NB37 220 aa12.72□□□□□ -0.37
U2AF2-204ENST00000587275 SMIM12Q96EX1 92 aa12.72□□□□□ -0.37
U2AF2-204ENST00000587275 F2Z2F3 143 aa12.71□□□□□ -0.37
U2AF2-204ENST00000587275 TRGC1P0CF51 173 aa12.71□□□□□ -0.37
U2AF2-204ENST00000587275 AMTP48728 403 aa12.71□□□□□ -0.37
U2AF2-204ENST00000587275 EIF5AP63241 154 aaKnown RBP12.71□□□□□ -0.37
U2AF2-204ENST00000587275 C9orf62Q8N4C0 152 aa12.71□□□□□ -0.37
U2AF2-204ENST00000587275 NUDT10Q8NFP7 164 aa12.71□□□□□ -0.37
U2AF2-204ENST00000587275 NUDT11Q96G61 164 aa12.71□□□□□ -0.37
U2AF2-204ENST00000587275 CNFNQ9BYD5 112 aa12.71□□□□□ -0.37
U2AF2-204ENST00000587275 LRP2P98164 4655 aa12.71□□□□□ -0.37
U2AF2-204ENST00000587275 K7EN84 100 aa12.7□□□□□ -0.38
U2AF2-204ENST00000587275 IFNA1P01562 189 aa12.7□□□□□ -0.38
U2AF2-204ENST00000587275 SULT1A2P50226 295 aa12.7□□□□□ -0.38
U2AF2-204ENST00000587275 Q6ZNX1 250 aa12.7□□□□□ -0.38
U2AF2-204ENST00000587275 Q6ZRU5 148 aa12.7□□□□□ -0.38
U2AF2-204ENST00000587275 GAGE12HA6NDE8 117 aa12.69□□□□□ -0.38
U2AF2-204ENST00000587275 FOXA3P55318 350 aaPredicted RBP12.69□□□□□ -0.38
U2AF2-204ENST00000587275 RPL39LQ96EH5 51 aaKnown RBP12.69□□□□□ -0.38
U2AF2-204ENST00000587275 MED9Q9NWA0 146 aa12.69□□□□□ -0.38
U2AF2-204ENST00000587275 PLAC8Q9NZF1 115 aa12.69□□□□□ -0.38
U2AF2-204ENST00000587275 PHOX2AO14813 284 aa12.68□□□□□ -0.38
U2AF2-204ENST00000587275 PDE6DO43924 150 aa12.68□□□□□ -0.38
U2AF2-204ENST00000587275 BCL2P10415 239 aa12.68□□□□□ -0.38
U2AF2-204ENST00000587275 COTL1Q14019 142 aa12.68□□□□□ -0.38
U2AF2-204ENST00000587275 RNF185Q96GF1 192 aa12.68□□□□□ -0.38
U2AF2-204ENST00000587275 RNASE7Q9H1E1 156 aaKnown RBP12.68□□□□□ -0.38
U2AF2-204ENST00000587275 AP5S1Q9NUS5 200 aa12.68□□□□□ -0.38
U2AF2-204ENST00000587275 IGKV3OR2-268A0A0C4DH90 116 aa12.67□□□□□ -0.38
U2AF2-204ENST00000587275 UBE2L6O14933 153 aa12.67□□□□□ -0.38
U2AF2-204ENST00000587275 ODF1Q14990 250 aa12.67□□□□□ -0.38
U2AF2-204ENST00000587275 HIGD2BQ4VC39 106 aa12.67□□□□□ -0.38
U2AF2-204ENST00000587275 WDR73Q6P4I2 378 aa12.67□□□□□ -0.38
U2AF2-204ENST00000587275 PRSS3P2Q8NHM4 247 aa12.67□□□□□ -0.38
U2AF2-204ENST00000587275 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
U2AF2-204ENST00000587275 XKRY2A2RUG3 117 aa12.66□□□□□ -0.38
U2AF2-204ENST00000587275 COX6A2Q02221 97 aa12.66□□□□□ -0.38
U2AF2-204ENST00000587275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.65□□□□□ -0.38
U2AF2-204ENST00000587275 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.65□□□□□ -0.38
U2AF2-204ENST00000587275 IGKV2-29A2NJV5 120 aaPredicted RBP12.65□□□□□ -0.38
U2AF2-204ENST00000587275 TWIST1Q15672 202 aa12.65□□□□□ -0.38
U2AF2-204ENST00000587275 RPP21Q9H633 154 aaKnown RBP12.65□□□□□ -0.38
U2AF2-204ENST00000587275 OCC1Q8TAD7 63 aa12.64□□□□□ -0.39
U2AF2-204ENST00000587275 CHCHD10Q8WYQ3 142 aaPredicted RBP12.64□□□□□ -0.39
U2AF2-204ENST00000587275 GAS8-AS1O95177 125 aa12.63□□□□□ -0.39
U2AF2-204ENST00000587275 GVQW2A0A096LPI5 108 aaPredicted RBP12.62□□□□□ -0.39
U2AF2-204ENST00000587275 FOXI1Q12951 378 aa12.62□□□□□ -0.39
U2AF2-204ENST00000587275 DPH3Q96FX2 82 aa12.62□□□□□ -0.39
U2AF2-204ENST00000587275 RNF213Q63HN8 5207 aa12.62□□□□□ -0.39
U2AF2-204ENST00000587275 A0A096LNI7 61 aa12.61□□□□□ -0.39
U2AF2-204ENST00000587275 IGKV2-24A0A0C4DH68 120 aa12.61□□□□□ -0.39
U2AF2-204ENST00000587275 FAM231BA6NCW3 169 aa12.61□□□□□ -0.39
U2AF2-204ENST00000587275 RPS10P46783 165 aaKnown RBP12.61□□□□□ -0.39
U2AF2-204ENST00000587275 TEX46H3BTG2 121 aa12.6□□□□□ -0.39
U2AF2-204ENST00000587275 NDUFS6O75380 124 aaKnown RBP12.6□□□□□ -0.39
U2AF2-204ENST00000587275 FGF6P10767 208 aa12.6□□□□□ -0.39
U2AF2-204ENST00000587275 PRR3P79522 188 aaKnown RBP12.6□□□□□ -0.39
U2AF2-204ENST00000587275 BIN3Q9NQY0 253 aa12.6□□□□□ -0.39
U2AF2-204ENST00000587275 SDHAF1A6NFY7 115 aa12.59□□□□□ -0.39
U2AF2-204ENST00000587275 MAJINQ3KP22 176 aa12.59□□□□□ -0.39
U2AF2-204ENST00000587275 EIF5AL1Q6IS14 154 aaKnown RBP12.59□□□□□ -0.39
U2AF2-204ENST00000587275 RNASEKQ6P5S7 137 aaKnown RBP12.59□□□□□ -0.39
U2AF2-204ENST00000587275 LINC00526Q96FQ7 95 aa12.59□□□□□ -0.39
U2AF2-204ENST00000587275 NCR2O95944 276 aa12.58□□□□□ -0.4
U2AF2-204ENST00000587275 APCSP02743 223 aa12.58□□□□□ -0.4
U2AF2-204ENST00000587275 AMMECR1LQ6DCA0 310 aa12.58□□□□□ -0.4
U2AF2-204ENST00000587275 CFAP161Q6P656 301 aa12.57□□□□□ -0.4
U2AF2-204ENST00000587275 STPG4Q8N801 248 aa12.57□□□□□ -0.4
U2AF2-204ENST00000587275 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
U2AF2-204ENST00000587275 LYPD6BQ8NI32 183 aa12.56□□□□□ -0.4
U2AF2-204ENST00000587275 H7C423 109 aa12.55□□□□□ -0.4
U2AF2-204ENST00000587275 TSHBP01222 138 aa12.55□□□□□ -0.4
U2AF2-204ENST00000587275 ESDP10768 282 aa12.55□□□□□ -0.4
U2AF2-204ENST00000587275 SLC51BQ86UW2 128 aa12.55□□□□□ -0.4
U2AF2-204ENST00000587275 OR5A1Q8NGJ0 315 aa12.55□□□□□ -0.4
U2AF2-204ENST00000587275 C7orf33Q8WU49 177 aa12.55□□□□□ -0.4
U2AF2-204ENST00000587275 TRBV6-5A0A0K0K1A5 114 aa12.54□□□□□ -0.4
U2AF2-204ENST00000587275 XCL1P47992 114 aa12.54□□□□□ -0.4
U2AF2-204ENST00000587275 LINC01600Q96MT4 127 aa12.54□□□□□ -0.4
U2AF2-204ENST00000587275 LINC00959A0A1B0GUT2 108 aa12.53□□□□□ -0.4
U2AF2-204ENST00000587275 CCL25O15444 150 aa12.53□□□□□ -0.4
U2AF2-204ENST00000587275 TMEM242Q9NWH2 141 aa12.53□□□□□ -0.4
U2AF2-204ENST00000587275 I3L3M4 83 aa12.52□□□□□ -0.41
U2AF2-204ENST00000587275 GATCO43716 136 aaKnown RBP12.52□□□□□ -0.41
U2AF2-204ENST00000587275 ZNF25P17030 456 aaPredicted RBP12.52□□□□□ -0.41
U2AF2-204ENST00000587275 FAM231DQ6ZW35 169 aa12.52□□□□□ -0.41
U2AF2-204ENST00000587275 TAGLN2P37802 199 aaKnown RBP12.51□□□□□ -0.41
U2AF2-204ENST00000587275 TEX261Q6UWH6 196 aa12.5□□□□□ -0.41
U2AF2-204ENST00000587275 TMEM250H0YL14 139 aa12.49□□□□□ -0.41
U2AF2-204ENST00000587275 PMCHP20382 165 aa12.49□□□□□ -0.41
U2AF2-204ENST00000587275 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
U2AF2-204ENST00000587275 SMIM15Q7Z3B0 74 aa12.49□□□□□ -0.41
U2AF2-204ENST00000587275 A8MWL6 223 aa12.48□□□□□ -0.41
U2AF2-204ENST00000587275 CARD19Q96LW7 228 aa12.48□□□□□ -0.41
U2AF2-204ENST00000587275 CDC42SE2Q9NRR3 84 aa12.48□□□□□ -0.41
U2AF2-204ENST00000587275 IGHV1-58A0A0C4DH39 117 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms