RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 IGHV3-53P01767 116 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 FGF6P10767 208 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 BOD1L2Q8IYS8 172 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 DNAJC30Q96LL9 226 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 TNFRSF18Q9Y5U5 241 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 SPATA25Q9BR10 227 aa13.27□□□□□ -0.29
RETREG3-205ENST00000586870 COL5A1-AS1Q5SY13 56 aa13.26□□□□□ -0.29
RETREG3-205ENST00000586870 ZC2HC1BQ5TFG8 222 aa13.25□□□□□ -0.29
RETREG3-205ENST00000586870 CSNK1G2-AS1Q8NCQ2 148 aa13.25□□□□□ -0.29
RETREG3-205ENST00000586870 C16orf74Q96GX8 76 aa13.25□□□□□ -0.29
RETREG3-205ENST00000586870 TP73-AS1Q9UF72 201 aa13.25□□□□□ -0.29
RETREG3-205ENST00000586870 PRSS29PA6NIE9 313 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 SIVA1O15304 175 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 HINT1P49773 126 aaPredicted RBP13.24□□□□□ -0.29
RETREG3-205ENST00000586870 DAZ2Q13117 558 aaKnown RBP13.24□□□□□ -0.29
RETREG3-205ENST00000586870 Q6ZSN1 163 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 TRGV1A0A0A0MS02 117 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 P0DMU3 169 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 FAM231AP0DMU4 169 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 FAM231CP0DMU5 169 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 NMUP48645 174 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 RPL39P62891 51 aaKnown RBP13.24□□□□□ -0.29
RETREG3-205ENST00000586870 C20orf203Q8NBC4 194 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 OR4C5Q8NGB2 326 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 TM2D3Q9BRN9 247 aa13.24□□□□□ -0.29
RETREG3-205ENST00000586870 PMVKQ15126 192 aa13.23□□□□□ -0.29
RETREG3-205ENST00000586870 C2orf91Q6ZV80 131 aa13.23□□□□□ -0.29
RETREG3-205ENST00000586870 KIR2DL5BQ8NHK3 375 aa13.23□□□□□ -0.29
RETREG3-205ENST00000586870 DEFB104AQ8WTQ1 72 aa13.23□□□□□ -0.29
RETREG3-205ENST00000586870 TRAV4A0A0B4J268 109 aa13.21□□□□□ -0.29
RETREG3-205ENST00000586870 RRN3P1Q2M238 152 aa13.21□□□□□ -0.29
RETREG3-205ENST00000586870 PAPPA-AS1Q5QFB9 102 aa13.21□□□□□ -0.29
RETREG3-205ENST00000586870 NACAE9PAV3 2078 aa13.21□□□□□ -0.29
RETREG3-205ENST00000586870 TCTAP57738 103 aa13.21□□□□□ -0.3
RETREG3-205ENST00000586870 MPV17L2Q567V2 206 aa13.21□□□□□ -0.3
RETREG3-205ENST00000586870 PCP2Q8IVA1 136 aa13.21□□□□□ -0.3
RETREG3-205ENST00000586870 OVOL2Q9BRP0 275 aa13.21□□□□□ -0.3
RETREG3-205ENST00000586870 IGKV2D-26A0A0A0MRZ7 120 aa13.2□□□□□ -0.3
RETREG3-205ENST00000586870 PLAC8L1A1L4L8 177 aa13.2□□□□□ -0.3
RETREG3-205ENST00000586870 Q6ZTI0 123 aa13.2□□□□□ -0.3
RETREG3-205ENST00000586870 CST9LQ9H4G1 147 aa13.2□□□□□ -0.3
RETREG3-205ENST00000586870 RETNQ9HD89 108 aa13.2□□□□□ -0.3
RETREG3-205ENST00000586870 CIDEAO60543 219 aa13.19□□□□□ -0.3
RETREG3-205ENST00000586870 NOP10Q9NPE3 64 aaKnown RBP13.19□□□□□ -0.3
RETREG3-205ENST00000586870 DEFB135Q30KP9 77 aa13.18□□□□□ -0.3
RETREG3-205ENST00000586870 TMEM97Q5BJF2 176 aa13.18□□□□□ -0.3
RETREG3-205ENST00000586870 BVES-AS1Q5T3Y7 98 aa13.18□□□□□ -0.3
RETREG3-205ENST00000586870 PYGO1Q9Y3Y4 419 aa13.18□□□□□ -0.3
RETREG3-205ENST00000586870 TRBV10-1A0A0K0K1A3 114 aa13.17□□□□□ -0.3
RETREG3-205ENST00000586870 ZNF479Q96JC4 524 aa13.17□□□□□ -0.3
RETREG3-205ENST00000586870 NPSP0C0P6 89 aa13.17□□□□□ -0.3
RETREG3-205ENST00000586870 HIGD1BQ9P298 99 aa13.17□□□□□ -0.3
RETREG3-205ENST00000586870 Q9UF83 564 aa13.17□□□□□ -0.3
RETREG3-205ENST00000586870 IGLV4-69A0A075B6H9 119 aa13.15□□□□□ -0.3
RETREG3-205ENST00000586870 CRYBA4P53673 196 aa13.15□□□□□ -0.3
RETREG3-205ENST00000586870 COTL1Q14019 142 aa13.15□□□□□ -0.3
RETREG3-205ENST00000586870 K7EQD1 137 aa13.14□□□□□ -0.31
RETREG3-205ENST00000586870 HSD52Q0P140 79 aa13.14□□□□□ -0.31
RETREG3-205ENST00000586870 RNF183Q96D59 192 aa13.14□□□□□ -0.31
RETREG3-205ENST00000586870 CHCHD7Q9BUK0 85 aa13.14□□□□□ -0.31
RETREG3-205ENST00000586870 IGLV4-3A0A075B6K6 122 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 C11orf86A6NJI1 115 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 E9PLD3 99 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 RPL36AP83881 106 aaKnown RBP13.13□□□□□ -0.31
RETREG3-205ENST00000586870 RPL36ALQ969Q0 106 aaKnown RBP13.13□□□□□ -0.31
RETREG3-205ENST00000586870 TRBV7-3A0A075B6L6 115 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 GAGE12BA1L429 117 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 GAGE7O76087 117 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 GAGE12FP0CL80 117 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 GAGE12GP0CL81 117 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 GAGE12IP0CL82 117 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 OR11H2Q8NH07 326 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 ZNRF2Q8NHG8 242 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 VCX2Q9H322 139 aa13.13□□□□□ -0.31
RETREG3-205ENST00000586870 TRGV2A0A075B6R0 118 aa13.12□□□□□ -0.31
RETREG3-205ENST00000586870 SMIM9A6NGZ8 99 aa13.12□□□□□ -0.31
RETREG3-205ENST00000586870 HERVK_113P61574 105 aa13.12□□□□□ -0.31
RETREG3-205ENST00000586870 NFE4Q86UQ8 179 aa13.12□□□□□ -0.31
RETREG3-205ENST00000586870 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-205ENST00000586870 WWC2-AS2Q96NR7 200 aa13.12□□□□□ -0.31
RETREG3-205ENST00000586870 OPRPNQ99935 248 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-205ENST00000586870 SPANXA1Q9NS26 97 aa13.12□□□□□ -0.31
RETREG3-205ENST00000586870 TRAV8-6A0A0B4J262 113 aa13.11□□□□□ -0.31
RETREG3-205ENST00000586870 SEC11AP67812 179 aa13.11□□□□□ -0.31
RETREG3-205ENST00000586870 TTTY13Q9BZ97 58 aa13.11□□□□□ -0.31
RETREG3-205ENST00000586870 IGHV3-38A0A0C4DH36 116 aa13.1□□□□□ -0.31
RETREG3-205ENST00000586870 MAPKAPK5-AS1Q8N8E1 139 aa13.1□□□□□ -0.31
RETREG3-205ENST00000586870 SLC25A29Q8N8R3 303 aa13.1□□□□□ -0.31
RETREG3-205ENST00000586870 AMELXQ99217 191 aa13.1□□□□□ -0.31
RETREG3-205ENST00000586870 TRBV25-1A0A075B6N4 114 aa13.1□□□□□ -0.31
RETREG3-205ENST00000586870 TRBV6-4A0A1B0GX49 114 aa13.1□□□□□ -0.31
RETREG3-205ENST00000586870 DAZ4Q86SG3 579 aaKnown RBP13.1□□□□□ -0.31
RETREG3-205ENST00000586870 ORAOV1Q8WV07 137 aa13.1□□□□□ -0.31
RETREG3-205ENST00000586870 PRADC1Q9BSG0 188 aa13.1□□□□□ -0.31
RETREG3-205ENST00000586870 DAZ3Q9NR90 486 aaKnown RBP13.1□□□□□ -0.31
RETREG3-205ENST00000586870 UBE2D4Q9Y2X8 147 aa13.09□□□□□ -0.31
RETREG3-205ENST00000586870 MYMXA0A1B0GTQ4 84 aa13.08□□□□□ -0.32
RETREG3-205ENST00000586870 ZNF25P17030 456 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-205ENST00000586870 EMP1P54849 157 aa13.08□□□□□ -0.32
RETREG3-205ENST00000586870 UBE2D3P61077 147 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms