RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 TMEM243Q9BU79 118 aa13□□□□□ -0.33
DDX39A-204ENST00000586558 A0A087WX48 190 aa12.99□□□□□ -0.33
DDX39A-204ENST00000586558 VCYO14598 125 aa12.99□□□□□ -0.33
DDX39A-204ENST00000586558 ELOBQ15370 118 aa12.99□□□□□ -0.33
DDX39A-204ENST00000586558 C1orf134Q5TEV5 83 aa12.99□□□□□ -0.33
DDX39A-204ENST00000586558 ATRAIDQ6UW56 229 aa12.99□□□□□ -0.33
DDX39A-204ENST00000586558 PRELID3AQ96N28 172 aa12.99□□□□□ -0.33
DDX39A-204ENST00000586558 IGHV3-30P01768 117 aa12.98□□□□□ -0.33
DDX39A-204ENST00000586558 IGHV3-33P01772 117 aa12.98□□□□□ -0.33
DDX39A-204ENST00000586558 IGHV3-30-3P0DP02 117 aa12.98□□□□□ -0.33
DDX39A-204ENST00000586558 IGHV3-30-5P0DP03 117 aa12.98□□□□□ -0.33
DDX39A-204ENST00000586558 C6orf223Q8N319 242 aa12.98□□□□□ -0.33
DDX39A-204ENST00000586558 HYDINQ4G0P3 5121 aa12.97□□□□□ -0.33
DDX39A-204ENST00000586558 NPYP01303 97 aa12.97□□□□□ -0.33
DDX39A-204ENST00000586558 APCSP02743 223 aa12.97□□□□□ -0.33
DDX39A-204ENST00000586558 LAGE3Q14657 143 aa12.97□□□□□ -0.33
DDX39A-204ENST00000586558 KIR2DL4Q99706 377 aa12.97□□□□□ -0.33
DDX39A-204ENST00000586558 SMCO4Q9NRQ5 59 aa12.97□□□□□ -0.33
DDX39A-204ENST00000586558 TGIF2-C20orf24A0A0A6YYL0 155 aa12.96□□□□□ -0.33
DDX39A-204ENST00000586558 IBA57-AS1B1ANH7 110 aa12.96□□□□□ -0.33
DDX39A-204ENST00000586558 TMEM262E9PQX1 116 aa12.96□□□□□ -0.33
DDX39A-204ENST00000586558 TCAPO15273 167 aa12.96□□□□□ -0.33
DDX39A-204ENST00000586558 TSHBP01222 138 aa12.96□□□□□ -0.33
DDX39A-204ENST00000586558 SMIM2Q9BVW6 85 aa12.96□□□□□ -0.33
DDX39A-204ENST00000586558 NFE4Q86UQ8 179 aa12.95□□□□□ -0.34
DDX39A-204ENST00000586558 Q8N3U1 123 aa12.95□□□□□ -0.34
DDX39A-204ENST00000586558 H7C423 109 aa12.94□□□□□ -0.34
DDX39A-204ENST00000586558 UBE2L6O14933 153 aa12.94□□□□□ -0.34
DDX39A-204ENST00000586558 FCER1GP30273 86 aa12.94□□□□□ -0.34
DDX39A-204ENST00000586558 GAGE6Q13070 117 aa12.94□□□□□ -0.34
DDX39A-204ENST00000586558 DEFB104AQ8WTQ1 72 aa12.94□□□□□ -0.34
DDX39A-204ENST00000586558 YPEL4Q96NS1 127 aa12.94□□□□□ -0.34
DDX39A-204ENST00000586558 MPV17L2Q567V2 206 aa12.93□□□□□ -0.34
DDX39A-204ENST00000586558 LINC00336Q6ZUF6 198 aa12.93□□□□□ -0.34
DDX39A-204ENST00000586558 MAP1LC3AQ9H492 121 aa12.93□□□□□ -0.34
DDX39A-204ENST00000586558 A0A1B0GUV1 79 aa12.92□□□□□ -0.34
DDX39A-204ENST00000586558 PRSS47A8MTI9 375 aa12.92□□□□□ -0.34
DDX39A-204ENST00000586558 RTL8CO15255 209 aa12.92□□□□□ -0.34
DDX39A-204ENST00000586558 ESDP10768 282 aa12.92□□□□□ -0.34
DDX39A-204ENST00000586558 RBX1P62877 108 aa12.92□□□□□ -0.34
DDX39A-204ENST00000586558 CBLN2Q8IUK8 224 aa12.92□□□□□ -0.34
DDX39A-204ENST00000586558 TRAV8-3A0A0A6YYJ7 113 aa12.91□□□□□ -0.34
DDX39A-204ENST00000586558 MRPL18Q9H0U6 180 aaKnown RBP12.91□□□□□ -0.34
DDX39A-204ENST00000586558 FABP9Q0Z7S8 132 aa12.9□□□□□ -0.34
DDX39A-204ENST00000586558 Q8N976 141 aa12.9□□□□□ -0.34
DDX39A-204ENST00000586558 KLK12Q9UKR0 248 aa12.9□□□□□ -0.34
DDX39A-204ENST00000586558 KIAA1644Q3SXP7 199 aa12.89□□□□□ -0.35
DDX39A-204ENST00000586558 AMMECR1LQ6DCA0 310 aa12.89□□□□□ -0.35
DDX39A-204ENST00000586558 TRAPPC1Q9Y5R8 145 aa12.89□□□□□ -0.35
DDX39A-204ENST00000586558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-204ENST00000586558 IGKV2-29A2NJV5 120 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-204ENST00000586558 ANGP03950 147 aaKnown RBP12.88□□□□□ -0.35
DDX39A-204ENST00000586558 ZNF25P17030 456 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-204ENST00000586558 SMAGPQ0VAQ4 97 aa12.88□□□□□ -0.35
DDX39A-204ENST00000586558 Q6ZRN7 208 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-204ENST00000586558 FGF6P10767 208 aa12.87□□□□□ -0.35
DDX39A-204ENST00000586558 RAB5AP20339 215 aa12.87□□□□□ -0.35
DDX39A-204ENST00000586558 Q0VG73 95 aa12.87□□□□□ -0.35
DDX39A-204ENST00000586558 MRPL52Q86TS9 123 aaKnown RBP12.87□□□□□ -0.35
DDX39A-204ENST00000586558 Q8N8P6 123 aa12.87□□□□□ -0.35
DDX39A-204ENST00000586558 TMEM18Q96B42 140 aa12.87□□□□□ -0.35
DDX39A-204ENST00000586558 ALKBH7Q9BT30 221 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-204ENST00000586558 Q9HAA7 133 aa12.87□□□□□ -0.35
DDX39A-204ENST00000586558 NXT2Q9NPJ8 142 aaKnown RBP12.87□□□□□ -0.35
DDX39A-204ENST00000586558 LOC389332A0A1B0GUA5 103 aa12.86□□□□□ -0.35
DDX39A-204ENST00000586558 K7EMI3 77 aa12.86□□□□□ -0.35
DDX39A-204ENST00000586558 CRPP02741 224 aa12.86□□□□□ -0.35
DDX39A-204ENST00000586558 UBE2WQ96B02 151 aa12.86□□□□□ -0.35
DDX39A-204ENST00000586558 RMI2Q96E14 147 aa12.86□□□□□ -0.35
DDX39A-204ENST00000586558 PRR34Q9NV39 138 aa12.86□□□□□ -0.35
DDX39A-204ENST00000586558 RNASEKQ6P5S7 137 aaKnown RBP12.85□□□□□ -0.35
DDX39A-204ENST00000586558 C20orf203Q8NBC4 194 aa12.85□□□□□ -0.35
DDX39A-204ENST00000586558 TM2D2Q9BX73 214 aa12.85□□□□□ -0.35
DDX39A-204ENST00000586558 COX11Q9Y6N1 276 aa12.85□□□□□ -0.35
DDX39A-204ENST00000586558 EPPK1P58107 5090 aaKnown RBP12.84□□□□□ -0.35
DDX39A-204ENST00000586558 IGLV4-60A0A075B6I1 120 aa12.84□□□□□ -0.35
DDX39A-204ENST00000586558 PRSS29PA6NIE9 313 aa12.84□□□□□ -0.35
DDX39A-204ENST00000586558 TMEM101Q96IK0 257 aa12.84□□□□□ -0.35
DDX39A-204ENST00000586558 MIAQ16674 131 aa12.83□□□□□ -0.36
DDX39A-204ENST00000586558 ENHOQ6UWT2 76 aa12.83□□□□□ -0.36
DDX39A-204ENST00000586558 LINC00269Q8N2A0 174 aa12.83□□□□□ -0.36
DDX39A-204ENST00000586558 OR5A1Q8NGJ0 315 aa12.83□□□□□ -0.36
DDX39A-204ENST00000586558 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.36
DDX39A-204ENST00000586558 ORMDL2Q53FV1 153 aa12.82□□□□□ -0.36
DDX39A-204ENST00000586558 CSDC2Q9Y534 153 aaKnown RBP12.82□□□□□ -0.36
DDX39A-204ENST00000586558 PSCAO43653 123 aa12.81□□□□□ -0.36
DDX39A-204ENST00000586558 S100A1P23297 94 aa12.81□□□□□ -0.36
DDX39A-204ENST00000586558 IFI27P40305 119 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-204ENST00000586558 REG3AQ06141 175 aa12.81□□□□□ -0.36
DDX39A-204ENST00000586558 DNAH2Q9P225 4427 aa12.8□□□□□ -0.36
DDX39A-204ENST00000586558 TNP2Q05952 138 aa12.8□□□□□ -0.36
DDX39A-204ENST00000586558 DGAT2L7PQ6IED9 249 aa12.8□□□□□ -0.36
DDX39A-204ENST00000586558 PRSS3P2Q8NHM4 247 aa12.8□□□□□ -0.36
DDX39A-204ENST00000586558 C1orf43Q9BWL3 253 aa12.8□□□□□ -0.36
DDX39A-204ENST00000586558 UBE2D4Q9Y2X8 147 aa12.8□□□□□ -0.36
DDX39A-204ENST00000586558 BIRC6Q9NR09 4857 aa12.79□□□□□ -0.36
DDX39A-204ENST00000586558 IGKV2D-24A0A075B6R9 120 aa12.79□□□□□ -0.36
DDX39A-204ENST00000586558 G0S2P27469 103 aa12.79□□□□□ -0.36
DDX39A-204ENST00000586558 CLPSL2Q6UWE3 100 aa12.79□□□□□ -0.36
DDX39A-204ENST00000586558 SPANXA1Q9NS26 97 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms