RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 NPYP01303 97 aa11.1□□□□□ -0.63
ATG4D-205ENST00000586477 PKIAP61925 76 aa11.1□□□□□ -0.63
ATG4D-205ENST00000586477 KIAA1644Q3SXP7 199 aa11.1□□□□□ -0.63
ATG4D-205ENST00000586477 LYPD5Q6UWN5 251 aa11.1□□□□□ -0.63
ATG4D-205ENST00000586477 UBE2DNLQ8IWF7 75 aa11.1□□□□□ -0.63
ATG4D-205ENST00000586477 Q9UF83 564 aa11.1□□□□□ -0.63
ATG4D-205ENST00000586477 POLR2KP53803 58 aaKnown RBP11.09□□□□□ -0.63
ATG4D-205ENST00000586477 LELP1Q5T871 98 aa11.09□□□□□ -0.63
ATG4D-205ENST00000586477 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
ATG4D-205ENST00000586477 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
ATG4D-205ENST00000586477 NXT2Q9NPJ8 142 aaKnown RBP11.09□□□□□ -0.63
ATG4D-205ENST00000586477 TRBV25-1A0A075B6N4 114 aa11.08□□□□□ -0.64
ATG4D-205ENST00000586477 GAS8-AS1O95177 125 aa11.08□□□□□ -0.64
ATG4D-205ENST00000586477 FCER1GP30273 86 aa11.08□□□□□ -0.64
ATG4D-205ENST00000586477 MRPS16Q9Y3D3 137 aaKnown RBP11.08□□□□□ -0.64
ATG4D-205ENST00000586477 TRBV6-8A0A0A6YYG3 113 aa11.07□□□□□ -0.64
ATG4D-205ENST00000586477 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
ATG4D-205ENST00000586477 M0R2N4 97 aa11.07□□□□□ -0.64
ATG4D-205ENST00000586477 TRGC2P03986 189 aa11.07□□□□□ -0.64
ATG4D-205ENST00000586477 ESRGQ1W209 222 aa11.07□□□□□ -0.64
ATG4D-205ENST00000586477 Q6ZR54 194 aa11.07□□□□□ -0.64
ATG4D-205ENST00000586477 IGLV2-18A0A075B6J9 118 aa11.06□□□□□ -0.64
ATG4D-205ENST00000586477 IGHV3-38A0A0C4DH36 116 aa11.06□□□□□ -0.64
ATG4D-205ENST00000586477 RTL8CO15255 209 aa11.06□□□□□ -0.64
ATG4D-205ENST00000586477 G0S2P27469 103 aa11.06□□□□□ -0.64
ATG4D-205ENST00000586477 SMAGPQ0VAQ4 97 aa11.06□□□□□ -0.64
ATG4D-205ENST00000586477 IQCJQ1A5X6 159 aa11.06□□□□□ -0.64
ATG4D-205ENST00000586477 Q8N8P6 123 aa11.06□□□□□ -0.64
ATG4D-205ENST00000586477 UPK3BQ9BT76 320 aa11.06□□□□□ -0.64
ATG4D-205ENST00000586477 KIAA1109Q2LD37 5005 aa11.06□□□□□ -0.64
ATG4D-205ENST00000586477 AMTP48728 403 aa11.05□□□□□ -0.64
ATG4D-205ENST00000586477 RAB5BP61020 215 aa11.05□□□□□ -0.64
ATG4D-205ENST00000586477 LINC00336Q6ZUF6 198 aa11.05□□□□□ -0.64
ATG4D-205ENST00000586477 PRSS3P2Q8NHM4 247 aa11.05□□□□□ -0.64
ATG4D-205ENST00000586477 TMEM18Q96B42 140 aa11.05□□□□□ -0.64
ATG4D-205ENST00000586477 A0A1B0GVY2 172 aa11.04□□□□□ -0.64
ATG4D-205ENST00000586477 H7C423 109 aa11.04□□□□□ -0.64
ATG4D-205ENST00000586477 UBE2L6O14933 153 aa11.04□□□□□ -0.64
ATG4D-205ENST00000586477 TMEM243Q9BU79 118 aa11.04□□□□□ -0.64
ATG4D-205ENST00000586477 LINC00588Q9Y4M8 146 aa11.04□□□□□ -0.64
ATG4D-205ENST00000586477 LOC389332A0A1B0GUA5 103 aa11.03□□□□□ -0.64
ATG4D-205ENST00000586477 K7EP13 123 aa11.03□□□□□ -0.64
ATG4D-205ENST00000586477 ORMDL2Q53FV1 153 aa11.03□□□□□ -0.64
ATG4D-205ENST00000586477 CHCHD5Q9BSY4 110 aa11.03□□□□□ -0.64
ATG4D-205ENST00000586477 CHCHD7Q9BUK0 85 aa11.03□□□□□ -0.64
ATG4D-205ENST00000586477 LINC01549A6NIU2 74 aa11.02□□□□□ -0.65
ATG4D-205ENST00000586477 TSHBP01222 138 aa11.02□□□□□ -0.65
ATG4D-205ENST00000586477 FA2HQ7L5A8 372 aa11.02□□□□□ -0.65
ATG4D-205ENST00000586477 C18orf32Q8TCD1 76 aa11.02□□□□□ -0.65
ATG4D-205ENST00000586477 C1orf196B1AJZ1 125 aa11.01□□□□□ -0.65
ATG4D-205ENST00000586477 SIVA1O15304 175 aa11.01□□□□□ -0.65
ATG4D-205ENST00000586477 NTM-AS1Q6ZSK4 140 aa11.01□□□□□ -0.65
ATG4D-205ENST00000586477 TRAV9-2A0A087WT02 112 aa11□□□□□ -0.65
ATG4D-205ENST00000586477 A0A087WX48 190 aa11□□□□□ -0.65
ATG4D-205ENST00000586477 IFI27P40305 119 aaPredicted RBP11□□□□□ -0.65
ATG4D-205ENST00000586477 LAGE3Q14657 143 aa11□□□□□ -0.65
ATG4D-205ENST00000586477 KRTAP17-1Q9BYP8 105 aa11□□□□□ -0.65
ATG4D-205ENST00000586477 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
ATG4D-205ENST00000586477 PRSS29PA6NIE9 313 aa10.99□□□□□ -0.65
ATG4D-205ENST00000586477 LINC00614P0C842 121 aa10.99□□□□□ -0.65
ATG4D-205ENST00000586477 ESDP10768 282 aa10.99□□□□□ -0.65
ATG4D-205ENST00000586477 Q0VG73 95 aa10.99□□□□□ -0.65
ATG4D-205ENST00000586477 TTC32Q5I0X7 151 aa10.99□□□□□ -0.65
ATG4D-205ENST00000586477 BAGE3Q86Y29 109 aa10.99□□□□□ -0.65
ATG4D-205ENST00000586477 Q9H8V8 135 aa10.99□□□□□ -0.65
ATG4D-205ENST00000586477 TMEM262E9PQX1 116 aa10.98□□□□□ -0.65
ATG4D-205ENST00000586477 DNAH10OSP0CZ25 163 aa10.98□□□□□ -0.65
ATG4D-205ENST00000586477 ZNF25P17030 456 aaPredicted RBP10.98□□□□□ -0.65
ATG4D-205ENST00000586477 LINC01556Q5JQF7 62 aa10.98□□□□□ -0.65
ATG4D-205ENST00000586477 AMMECR1LQ6DCA0 310 aa10.98□□□□□ -0.65
ATG4D-205ENST00000586477 C10orf126Q8N4M7 172 aa10.98□□□□□ -0.65
ATG4D-205ENST00000586477 CHCHD1Q96BP2 118 aaKnown RBP10.98□□□□□ -0.65
ATG4D-205ENST00000586477 LINC01546A6NGU7 62 aa10.97□□□□□ -0.65
ATG4D-205ENST00000586477 NIT1Q86X76 327 aa10.97□□□□□ -0.65
ATG4D-205ENST00000586477 WFDC10BQ8IUB3 73 aa10.97□□□□□ -0.65
ATG4D-205ENST00000586477 C20orf203Q8NBC4 194 aa10.97□□□□□ -0.65
ATG4D-205ENST00000586477 A0A1B0GUV1 79 aa10.96□□□□□ -0.65
ATG4D-205ENST00000586477 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.65
ATG4D-205ENST00000586477 TMEM101Q96IK0 257 aa10.96□□□□□ -0.65
ATG4D-205ENST00000586477 CYSLTR1Q9Y271 337 aa10.96□□□□□ -0.65
ATG4D-205ENST00000586477 RYR1P21817 5038 aa10.96□□□□□ -0.66
ATG4D-205ENST00000586477 DGAT2L7PQ6IED9 249 aa10.95□□□□□ -0.66
ATG4D-205ENST00000586477 MRPL52Q86TS9 123 aaKnown RBP10.95□□□□□ -0.66
ATG4D-205ENST00000586477 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
ATG4D-205ENST00000586477 LRP1BQ9NZR2 4599 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 NBDYA0A0U1RRE5 68 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST1H2BKO60814 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST1H2BJP06899 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST1H2BOP23527 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST1H2BBP33778 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST1H2BDP58876 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST1H2BCP62807 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 GAGE6Q13070 117 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST2H2BEQ16778 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.94□□□□□ -0.66
ATG4D-205ENST00000586477 DEFB104AQ8WTQ1 72 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST1H2BHQ93079 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST1H2BNQ99877 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 HIST1H2BMQ99879 126 aa10.94□□□□□ -0.66
ATG4D-205ENST00000586477 KRTAP1-5Q9BYS1 174 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms