RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	SPACA4	Q8TDM5	124 aa		13.92	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	C11orf52	Q96A22	123 aa		13.92	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	DPH3P1	Q9H4G8	78 aa		13.92	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	C7orf33	Q8WU49	177 aa		13.91	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	NDUFS6	O75380	124 aa	Known RBP	13.9	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	CHTF8	P0CG12	524 aa		13.9	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	SUMO4	Q6EEV6	95 aa		13.9	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	WDR73	Q6P4I2	378 aa		13.9	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	TPPP3	Q9BW30	176 aa		13.9	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	EIF5A2	Q9GZV4	153 aa	Known RBP	13.9	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	MED9	Q9NWA0	146 aa		13.9	□□□□□ -0.18
PLEKHM1-214	ENST00000586084	IGLV4-60	A0A075B6I1	120 aa		13.89	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	UBE2L6	O14933	153 aa		13.89	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	SLPI	P03973	132 aa		13.89	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	CACNG7	P62955	275 aa		13.89	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	FER1L6-AS1	Q8NA97	138 aa		13.89	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	FAM210A	Q96ND0	272 aa		13.89	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	TMEM250	H0YL14	139 aa		13.88	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	RPL35	P42766	123 aa	Known RBP	13.88	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	RASL11A	Q6T310	242 aa		13.88	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	PGLYRP4	Q96LB8	373 aa		13.88	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	PLAC8	Q9NZF1	115 aa		13.88	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	RPS20	P60866	119 aa	Known RBP	13.87	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	CFAP161	Q6P656	301 aa		13.87	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	GFRA4	Q9GZZ7	299 aa		13.87	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	PHOX2A	O14813	284 aa		13.86	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	IGLC6	P0CF74	106 aa		13.86	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	SMIM12	Q96EX1	92 aa		13.86	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	OR2D3	Q8NGH3	330 aa		13.85	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	SMDT1	Q9H4I9	107 aa		13.85	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	NIT2	Q9NQR4	276 aa		13.85	□□□□□ -0.19
PLEKHM1-214	ENST00000586084		F2Z2F3	143 aa		13.84	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	TRGC1	P0CF51	173 aa		13.84	□□□□□ -0.19
PLEKHM1-214	ENST00000586084	XKRY2	A2RUG3	117 aa		13.83	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	RPS10	P46783	165 aa	Known RBP	13.83	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	AMT	P48728	403 aa		13.83	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	GNG4	P50150	75 aa		13.83	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	COX6A2	Q02221	97 aa		13.83	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	COTL1	Q14019	142 aa		13.83	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	PEA15	Q15121	130 aa		13.83	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	BIN3	Q9NQY0	253 aa		13.83	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	CLLU1	Q5K131	121 aa		13.82	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	C15orf56	Q8N910	161 aa		13.82	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	GAGE12H	A6NDE8	117 aa		13.81	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	IFITM2	Q01629	132 aa		13.81	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	CENPW	Q5EE01	88 aa		13.81	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	GTSF1	Q8WW33	167 aa		13.81	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	LINC01600	Q96MT4	127 aa		13.81	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	MAJIN	Q3KP22	176 aa		13.8	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	RAB19	A4D1S5	217 aa		13.79	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	C19orf71	A6NCJ1	209 aa		13.79	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	IGKV2-24	A0A0C4DH68	120 aa		13.78	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	IGKV3OR2-268	A0A0C4DH90	116 aa		13.78	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	SRP19	P09132	144 aa	Known RBP	13.78	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	CEBPG	P53567	150 aa		13.78	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	PRR3	P79522	188 aa	Known RBP	13.78	□□□□□ -0.2
PLEKHM1-214	ENST00000586084	NTF3	P20783	257 aa		13.77	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	HIGD2B	Q4VC39	106 aa		13.77	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	FAM74A3	Q4VXF1	159 aa		13.77	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	LYZL1	Q6UWQ5	148 aa		13.77	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	PRSS3P2	Q8NHM4	247 aa		13.77	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	AMMECR1L	Q6DCA0	310 aa		13.76	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	STPG4	Q8N801	248 aa		13.76	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.75	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	SMIM7	Q9BQ49	75 aa		13.75	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	PKIG	Q9Y2B9	76 aa		13.75	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	TRBV20OR9-2	A0A075B6H5	130 aa		13.74	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.74	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	ZNF727	A8MUV8	499 aa		13.74	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	LINC00474	Q9P2X8	69 aa		13.73	□□□□□ -0.21
PLEKHM1-214	ENST00000586084		H7C423	109 aa		13.72	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	NCR2	O95944	276 aa		13.72	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	CTRL	P40313	264 aa		13.72	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	TWIST1	Q15672	202 aa		13.72	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	REG3G	Q6UW15	175 aa		13.72	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	OCC1	Q8TAD7	63 aa		13.72	□□□□□ -0.21
PLEKHM1-214	ENST00000586084		A0A096LNI7	61 aa		13.71	□□□□□ -0.21
PLEKHM1-214	ENST00000586084		A0A0J9YXV3	536 aa		13.71	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	RNASEK	Q6P5S7	137 aa	Known RBP	13.71	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	SPINK6	Q6UWN8	80 aa		13.71	□□□□□ -0.21
PLEKHM1-214	ENST00000586084	SRSF3	P84103	164 aa	Known RBP	13.7	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	TMEM241	Q24JQ0	296 aa		13.7	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	GATD1	Q8NB37	220 aa		13.7	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	APCS	P02743	223 aa		13.69	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	CNFN	Q9BYD5	112 aa		13.69	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	TRAV26-2	A0A0B4J265	109 aa		13.68	□□□□□ -0.22
PLEKHM1-214	ENST00000586084		C9JQL5	133 aa		13.68	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	FOXI1	Q12951	378 aa		13.68	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	UQCC3	Q6UW78	93 aa		13.68	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	LRP2	P98164	4655 aa		13.67	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.67	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.67	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	FGF6	P10767	208 aa		13.67	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	ZNF25	P17030	456 aa	Predicted RBP	13.67	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	NUDT10	Q8NFP7	164 aa		13.67	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	NUDT11	Q96G61	164 aa		13.67	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	NAT8	Q9UHE5	227 aa		13.67	□□□□□ -0.22
PLEKHM1-214	ENST00000586084		K7EN84	100 aa		13.66	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	FAM231D	Q6ZW35	169 aa		13.66	□□□□□ -0.22
PLEKHM1-214	ENST00000586084	SMIM15	Q7Z3B0	74 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms