RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 COX6A2Q02221 97 aa9.1□□□□□ -0.95
SDF2-202ENST00000585428 C15orf56Q8N910 161 aa9.1□□□□□ -0.95
SDF2-202ENST00000585428 LRP2P98164 4655 aa9.1□□□□□ -0.95
SDF2-202ENST00000585428 F2Z2F3 143 aa9.09□□□□□ -0.95
SDF2-202ENST00000585428 RPS10P46783 165 aaKnown RBP9.09□□□□□ -0.95
SDF2-202ENST00000585428 RPS20P60866 119 aaKnown RBP9.09□□□□□ -0.95
SDF2-202ENST00000585428 CCL20P78556 96 aa9.09□□□□□ -0.95
SDF2-202ENST00000585428 CFAP161Q6P656 301 aa9.09□□□□□ -0.95
SDF2-202ENST00000585428 C11orf52Q96A22 123 aa9.09□□□□□ -0.95
SDF2-202ENST00000585428 TPPP3Q9BW30 176 aa9.09□□□□□ -0.95
SDF2-202ENST00000585428 SMLR1H3BR10 107 aa9.08□□□□□ -0.96
SDF2-202ENST00000585428 NTF3P20783 257 aa9.08□□□□□ -0.96
SDF2-202ENST00000585428 ZNF345Q14585 488 aa9.08□□□□□ -0.96
SDF2-202ENST00000585428 OR2D3Q8NGH3 330 aa9.08□□□□□ -0.96
SDF2-202ENST00000585428 PRSS3P2Q8NHM4 247 aa9.08□□□□□ -0.96
SDF2-202ENST00000585428 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
SDF2-202ENST00000585428 BATF3Q9NR55 127 aa9.08□□□□□ -0.96
SDF2-202ENST00000585428 TNXBP22105 4242 aa9.07□□□□□ -0.96
SDF2-202ENST00000585428 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
SDF2-202ENST00000585428 NDUFS6O75380 124 aaKnown RBP9.07□□□□□ -0.96
SDF2-202ENST00000585428 WDR73Q6P4I2 378 aa9.07□□□□□ -0.96
SDF2-202ENST00000585428 LYZL1Q6UWQ5 148 aa9.07□□□□□ -0.96
SDF2-202ENST00000585428 C9orf62Q8N4C0 152 aa9.07□□□□□ -0.96
SDF2-202ENST00000585428 HMSDA8MTL9 139 aa9.06□□□□□ -0.96
SDF2-202ENST00000585428 UBE2L6O14933 153 aa9.06□□□□□ -0.96
SDF2-202ENST00000585428 SULT1A2P50226 295 aa9.06□□□□□ -0.96
SDF2-202ENST00000585428 KRTAP10-8P60410 259 aa9.06□□□□□ -0.96
SDF2-202ENST00000585428 COTL1Q14019 142 aa9.06□□□□□ -0.96
SDF2-202ENST00000585428 CENPWQ5EE01 88 aa9.06□□□□□ -0.96
SDF2-202ENST00000585428 GTSF1Q8WW33 167 aa9.06□□□□□ -0.96
SDF2-202ENST00000585428 DPH3P1Q9H4G8 78 aa9.06□□□□□ -0.96
SDF2-202ENST00000585428 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
SDF2-202ENST00000585428 RAB19A4D1S5 217 aa9.05□□□□□ -0.96
SDF2-202ENST00000585428 TRGC1P0CF51 173 aa9.05□□□□□ -0.96
SDF2-202ENST00000585428 AMTP48728 403 aa9.05□□□□□ -0.96
SDF2-202ENST00000585428 ODF1Q14990 250 aa9.05□□□□□ -0.96
SDF2-202ENST00000585428 MAJINQ3KP22 176 aa9.05□□□□□ -0.96
SDF2-202ENST00000585428 SMIM12Q96EX1 92 aa9.05□□□□□ -0.96
SDF2-202ENST00000585428 XKRY2A2RUG3 117 aa9.04□□□□□ -0.96
SDF2-202ENST00000585428 PRR3P79522 188 aaKnown RBP9.04□□□□□ -0.96
SDF2-202ENST00000585428 STPG4Q8N801 248 aa9.04□□□□□ -0.96
SDF2-202ENST00000585428 GATD1Q8NB37 220 aa9.04□□□□□ -0.96
SDF2-202ENST00000585428 MANBALQ9NQG1 85 aa9.04□□□□□ -0.96
SDF2-202ENST00000585428 GNG13Q9P2W3 67 aa9.04□□□□□ -0.96
SDF2-202ENST00000585428 A0A0J9YXV3 536 aa9.03□□□□□ -0.96
SDF2-202ENST00000585428 IFNA1P01562 189 aa9.03□□□□□ -0.96
SDF2-202ENST00000585428 SRSF9Q13242 221 aaKnown RBP eCLIP9.03□□□□□ -0.96
SDF2-202ENST00000585428 HIGD2BQ4VC39 106 aa9.03□□□□□ -0.96
SDF2-202ENST00000585428 CHCHD10Q8WYQ3 142 aaPredicted RBP9.03□□□□□ -0.96
SDF2-202ENST00000585428 CNFNQ9BYD5 112 aa9.03□□□□□ -0.96
SDF2-202ENST00000585428 TRBV20OR9-2A0A075B6H5 130 aa9.02□□□□□ -0.97
SDF2-202ENST00000585428 GVQW2A0A096LPI5 108 aaPredicted RBP9.02□□□□□ -0.97
SDF2-202ENST00000585428 IGKV2-24A0A0C4DH68 120 aa9.02□□□□□ -0.97
SDF2-202ENST00000585428 BCL2L11O43521 198 aa9.02□□□□□ -0.97
SDF2-202ENST00000585428 GNG4P50150 75 aa9.02□□□□□ -0.97
SDF2-202ENST00000585428 SPINK6Q6UWN8 80 aa9.02□□□□□ -0.97
SDF2-202ENST00000585428 LYPD6BQ8NI32 183 aa9.02□□□□□ -0.97
SDF2-202ENST00000585428 A0A096LNI7 61 aa9.01□□□□□ -0.97
SDF2-202ENST00000585428 IGKV3OR2-268A0A0C4DH90 116 aa9.01□□□□□ -0.97
SDF2-202ENST00000585428 KANTRA0A1W2PQU2 76 aa9.01□□□□□ -0.97
SDF2-202ENST00000585428 H7C423 109 aa9.01□□□□□ -0.97
SDF2-202ENST00000585428 CTRLP40313 264 aa9.01□□□□□ -0.97
SDF2-202ENST00000585428 FOXI1Q12951 378 aa9.01□□□□□ -0.97
SDF2-202ENST00000585428 NUDT10Q8NFP7 164 aa9.01□□□□□ -0.97
SDF2-202ENST00000585428 NUDT11Q96G61 164 aa9.01□□□□□ -0.97
SDF2-202ENST00000585428 TRAV26-2A0A0B4J265 109 aa9□□□□□ -0.97
SDF2-202ENST00000585428 NCR2O95944 276 aa9□□□□□ -0.97
SDF2-202ENST00000585428 EIF5AP63241 154 aaKnown RBP9□□□□□ -0.97
SDF2-202ENST00000585428 TWIST1Q15672 202 aa9□□□□□ -0.97
SDF2-202ENST00000585428 Q6ZNX1 250 aa9□□□□□ -0.97
SDF2-202ENST00000585428 LINC00474Q9P2X8 69 aa9□□□□□ -0.97
SDF2-202ENST00000585428 PDE6DO43924 150 aa8.99□□□□□ -0.97
SDF2-202ENST00000585428 RGS21Q2M5E4 152 aa8.99□□□□□ -0.97
SDF2-202ENST00000585428 BIN3Q9NQY0 253 aa8.99□□□□□ -0.97
SDF2-202ENST00000585428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.98□□□□□ -0.97
SDF2-202ENST00000585428 IGKV2-29A2NJV5 120 aaPredicted RBP8.98□□□□□ -0.97
SDF2-202ENST00000585428 FAM231BA6NCW3 169 aa8.98□□□□□ -0.97
SDF2-202ENST00000585428 FGF6P10767 208 aa8.98□□□□□ -0.97
SDF2-202ENST00000585428 FOXA3P55318 350 aaPredicted RBP8.98□□□□□ -0.97
SDF2-202ENST00000585428 MEF2BQ02080 365 aaPredicted RBP8.98□□□□□ -0.97
SDF2-202ENST00000585428 AMMECR1LQ6DCA0 310 aa8.98□□□□□ -0.97
SDF2-202ENST00000585428 RPL39LQ96EH5 51 aaKnown RBP8.98□□□□□ -0.97
SDF2-202ENST00000585428 MED9Q9NWA0 146 aa8.98□□□□□ -0.97
SDF2-202ENST00000585428 RNASEKQ6P5S7 137 aaKnown RBP8.97□□□□□ -0.97
SDF2-202ENST00000585428 REG3GQ6UW15 175 aa8.97□□□□□ -0.97
SDF2-202ENST00000585428 OR5A1Q8NGJ0 315 aa8.97□□□□□ -0.97
SDF2-202ENST00000585428 LINC00959A0A1B0GUT2 108 aa8.96□□□□□ -0.98
SDF2-202ENST00000585428 ZNF25P17030 456 aaPredicted RBP8.96□□□□□ -0.98
SDF2-202ENST00000585428 SDHAF1A6NFY7 115 aa8.95□□□□□ -0.98
SDF2-202ENST00000585428 TEX46H3BTG2 121 aa8.95□□□□□ -0.98
SDF2-202ENST00000585428 TEX261Q6UWH6 196 aa8.95□□□□□ -0.98
SDF2-202ENST00000585428 Q6ZRP5 223 aa8.95□□□□□ -0.98
SDF2-202ENST00000585428 OCC1Q8TAD7 63 aa8.95□□□□□ -0.98
SDF2-202ENST00000585428 LINC00526Q96FQ7 95 aa8.95□□□□□ -0.98
SDF2-202ENST00000585428 RPP21Q9H633 154 aaKnown RBP8.95□□□□□ -0.98
SDF2-202ENST00000585428 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
SDF2-202ENST00000585428 K7EN84 100 aa8.94□□□□□ -0.98
SDF2-202ENST00000585428 CCL25O15444 150 aa8.94□□□□□ -0.98
SDF2-202ENST00000585428 APCSP02743 223 aa8.94□□□□□ -0.98
SDF2-202ENST00000585428 ESDP10768 282 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms