RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 AGPAT4-IT1Q9H0P7 198 aa-0.21□□□□□ -2.44
TRAPPC8-212ENST00000584604 SCN3BQ9NY72 215 aa-0.21□□□□□ -2.44
TRAPPC8-212ENST00000584604 R4GMQ9 66 aa-0.21□□□□□ -2.44
TRAPPC8-212ENST00000584604 MYH8P13535 1937 aa-0.21□□□□□ -2.44
TRAPPC8-212ENST00000584604 CSMD3Q7Z407 3707 aa-0.22□□□□□ -2.44
TRAPPC8-212ENST00000584604 BIVM-ERCC5R4GMW8 1640 aa-0.22□□□□□ -2.44
TRAPPC8-212ENST00000584604 PIGBOS1A0A0B4J2F0 54 aa-0.22□□□□□ -2.44
TRAPPC8-212ENST00000584604 AQP10Q96PS8 301 aa-0.22□□□□□ -2.44
TRAPPC8-212ENST00000584604 PRDM2Q13029 1718 aa-0.22□□□□□ -2.44
TRAPPC8-212ENST00000584604 CFTRP13569 1480 aa-0.22□□□□□ -2.45
TRAPPC8-212ENST00000584604 NSD1Q96L73 2696 aaPredicted RBP-0.23□□□□□ -2.45
TRAPPC8-212ENST00000584604 C10orf142B7Z368 130 aa-0.23□□□□□ -2.45
TRAPPC8-212ENST00000584604 C10orf128Q5T292 105 aa-0.23□□□□□ -2.45
TRAPPC8-212ENST00000584604 SELENOWP63302 87 aa-0.24□□□□□ -2.45
TRAPPC8-212ENST00000584604 CCDC58Q4VC31 144 aa-0.24□□□□□ -2.45
TRAPPC8-212ENST00000584604 LSM10Q969L4 123 aaKnown RBP-0.24□□□□□ -2.45
TRAPPC8-212ENST00000584604 ARL11Q969Q4 196 aa-0.24□□□□□ -2.45
TRAPPC8-212ENST00000584604 RERGLQ9H628 205 aa-0.24□□□□□ -2.45
TRAPPC8-212ENST00000584604 NCOR1O75376 2440 aa-0.24□□□□□ -2.45
TRAPPC8-212ENST00000584604 MRC1P22897 1456 aa-0.24□□□□□ -2.45
TRAPPC8-212ENST00000584604 M0R135 149 aa-0.25□□□□□ -2.45
TRAPPC8-212ENST00000584604 C12orf73Q69YU5 71 aa-0.25□□□□□ -2.45
TRAPPC8-212ENST00000584604 Q8N8P6 123 aa-0.25□□□□□ -2.45
TRAPPC8-212ENST00000584604 LINC00470Q9BZP3 86 aa-0.25□□□□□ -2.45
TRAPPC8-212ENST00000584604 AKAP6Q13023 2319 aa-0.25□□□□□ -2.45
TRAPPC8-212ENST00000584604 PTPRQQ9UMZ3 2332 aa-0.25□□□□□ -2.45
TRAPPC8-212ENST00000584604 C2CD3Q4AC94 2353 aa-0.25□□□□□ -2.45
TRAPPC8-212ENST00000584604 MACF1Q9UPN3 7388 aaKnown RBP-0.25□□□□□ -2.45
TRAPPC8-212ENST00000584604 ZNF292O60281 2723 aa-0.26□□□□□ -2.45
TRAPPC8-212ENST00000584604 NHSL1Q5SYE7 1610 aa-0.26□□□□□ -2.45
TRAPPC8-212ENST00000584604 FAM25AB3EWG3 89 aa-0.26□□□□□ -2.45
TRAPPC8-212ENST00000584604 FAM25CB3EWG5 89 aa-0.26□□□□□ -2.45
TRAPPC8-212ENST00000584604 FAM25GB3EWG6 89 aa-0.26□□□□□ -2.45
TRAPPC8-212ENST00000584604 M0R3E3 92 aa-0.26□□□□□ -2.45
TRAPPC8-212ENST00000584604 Q6AWC8 147 aa-0.26□□□□□ -2.45
TRAPPC8-212ENST00000584604 SNRNP25Q9BV90 132 aaKnown RBP-0.26□□□□□ -2.45
TRAPPC8-212ENST00000584604 SERP1Q9Y6X1 66 aa-0.26□□□□□ -2.45
TRAPPC8-212ENST00000584604 TRAV22A0A0B4J277 110 aa-0.27□□□□□ -2.45
TRAPPC8-212ENST00000584604 NDUFA2O43678 99 aa-0.27□□□□□ -2.45
TRAPPC8-212ENST00000584604 TTC9CQ8N5M4 171 aa-0.27□□□□□ -2.45
TRAPPC8-212ENST00000584604 SMIM4Q8WVI0 70 aa-0.27□□□□□ -2.45
TRAPPC8-212ENST00000584604 LENEPQ9Y5L5 61 aa-0.27□□□□□ -2.45
TRAPPC8-212ENST00000584604 WNK3Q9BYP7 1800 aa-0.27□□□□□ -2.45
TRAPPC8-212ENST00000584604 ARAP2Q8WZ64 1704 aa-0.27□□□□□ -2.45
TRAPPC8-212ENST00000584604 CACNA1AO00555 2505 aa-0.28□□□□□ -2.45
TRAPPC8-212ENST00000584604 PATJQ8NI35 1801 aa-0.28□□□□□ -2.45
TRAPPC8-212ENST00000584604 CTXND1A0A1B0GTU2 59 aa-0.28□□□□□ -2.45
TRAPPC8-212ENST00000584604 GNG7O60262 68 aa-0.28□□□□□ -2.45
TRAPPC8-212ENST00000584604 S100A12P80511 92 aa-0.28□□□□□ -2.45
TRAPPC8-212ENST00000584604 WFDC2Q14508 124 aa-0.28□□□□□ -2.45
TRAPPC8-212ENST00000584604 PI4KAP42356 2102 aa-0.28□□□□□ -2.45
TRAPPC8-212ENST00000584604 FLNCQ14315 2725 aa-0.29□□□□□ -2.46
TRAPPC8-212ENST00000584604 DOCK1Q14185 1865 aa-0.29□□□□□ -2.46
TRAPPC8-212ENST00000584604 PLXNB2O15031 1838 aa-0.29□□□□□ -2.46
TRAPPC8-212ENST00000584604 SPAG11BQ08648 103 aa-0.29□□□□□ -2.46
TRAPPC8-212ENST00000584604 KRTAP6-1Q3LI64 71 aa-0.29□□□□□ -2.46
TRAPPC8-212ENST00000584604 MEIG1Q5JSS6 88 aa-0.29□□□□□ -2.46
TRAPPC8-212ENST00000584604 SPAG11AQ6PDA7 123 aa-0.29□□□□□ -2.46
TRAPPC8-212ENST00000584604 DOPEY2Q9Y3R5 2298 aa-0.29□□□□□ -2.46
TRAPPC8-212ENST00000584604 KDM3BQ7LBC6 1761 aa-0.29□□□□□ -2.46
TRAPPC8-212ENST00000584604 PPIP5K1Q6PFW1 1433 aa-0.3□□□□□ -2.46
TRAPPC8-212ENST00000584604 NAA60Q9H7X0 242 aa-0.3□□□□□ -2.46
TRAPPC8-212ENST00000584604 SPCS1Q9Y6A9 102 aa-0.3□□□□□ -2.46
TRAPPC8-212ENST00000584604 V9GYH0 126 aa-0.3□□□□□ -2.46
TRAPPC8-212ENST00000584604 PLCE1Q9P212 2302 aa-0.3□□□□□ -2.46
TRAPPC8-212ENST00000584604 PKDREJQ9NTG1 2253 aa-0.31□□□□□ -2.46
TRAPPC8-212ENST00000584604 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.31□□□□□ -2.46
TRAPPC8-212ENST00000584604 BCE1O60756 84 aa-0.31□□□□□ -2.46
TRAPPC8-212ENST00000584604 HAMPP81172 84 aa-0.31□□□□□ -2.46
TRAPPC8-212ENST00000584604 PHLPP1O60346 1717 aa-0.32□□□□□ -2.46
TRAPPC8-212ENST00000584604 LRP6O75581 1613 aa-0.33□□□□□ -2.46
TRAPPC8-212ENST00000584604 DEFB109BQ30KR1 87 aa-0.33□□□□□ -2.46
TRAPPC8-212ENST00000584604 Q8IZM0 81 aa-0.33□□□□□ -2.46
TRAPPC8-212ENST00000584604 TSC22D3Q99576 134 aa-0.33□□□□□ -2.46
TRAPPC8-212ENST00000584604 FAM107BQ9H098 131 aa-0.33□□□□□ -2.46
TRAPPC8-212ENST00000584604 KMT2AQ03164 3969 aa-0.33□□□□□ -2.46
TRAPPC8-212ENST00000584604 DOCK2Q92608 1830 aa-0.34□□□□□ -2.46
TRAPPC8-212ENST00000584604 ZNF236Q9UL36 1845 aa-0.34□□□□□ -2.46
TRAPPC8-212ENST00000584604 PTPN13Q12923 2485 aa-0.34□□□□□ -2.46
TRAPPC8-212ENST00000584604 AMELXQ99217 191 aa-0.34□□□□□ -2.46
TRAPPC8-212ENST00000584604 LAMC1P11047 1609 aa-0.35□□□□□ -2.46
TRAPPC8-212ENST00000584604 LRRC37A2A6NM11 1700 aa-0.35□□□□□ -2.47
TRAPPC8-212ENST00000584604 FOCADQ5VW36 1801 aa-0.35□□□□□ -2.47
TRAPPC8-212ENST00000584604 S100A3P33764 101 aa-0.35□□□□□ -2.47
TRAPPC8-212ENST00000584604 Q5VSD8 79 aa-0.35□□□□□ -2.47
TRAPPC8-212ENST00000584604 MYH7P12883 1935 aa-0.35□□□□□ -2.47
TRAPPC8-212ENST00000584604 BTG2P78543 158 aa-0.36□□□□□ -2.47
TRAPPC8-212ENST00000584604 Q56UQ5 140 aa-0.36□□□□□ -2.47
TRAPPC8-212ENST00000584604 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.36□□□□□ -2.47
TRAPPC8-212ENST00000584604 ERCC6L2Q5T890 1561 aa-0.36□□□□□ -2.47
TRAPPC8-212ENST00000584604 MIF4GDA9UHW6 222 aaKnown RBP-0.37□□□□□ -2.47
TRAPPC8-212ENST00000584604 HMGN1P05114 100 aa-0.37□□□□□ -2.47
TRAPPC8-212ENST00000584604 COX17Q14061 63 aa-0.37□□□□□ -2.47
TRAPPC8-212ENST00000584604 TMEM170BQ5T4T1 132 aa-0.37□□□□□ -2.47
TRAPPC8-212ENST00000584604 PPP3R2Q96LZ3 170 aa-0.37□□□□□ -2.47
TRAPPC8-212ENST00000584604 NDUFA4L2Q9NRX3 87 aa-0.37□□□□□ -2.47
TRAPPC8-212ENST00000584604 MBD5Q9P267 1494 aa-0.37□□□□□ -2.47
TRAPPC8-212ENST00000584604 MYCBP2O75592 4640 aa-0.37□□□□□ -2.47
TRAPPC8-212ENST00000584604 ANKRD17O75179 2603 aaKnown RBP-0.37□□□□□ -2.47
TRAPPC8-212ENST00000584604 LPAP08519 4548 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms