RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 COTL1Q14019 142 aa8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 CHCHD7Q9BUK0 85 aa8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 TM2D2Q9BX73 214 aa8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 TMEM191AQ9H0A3 160 aa8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 TRAV8-3A0A0A6YYJ7 113 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 A0A1B0GW15 77 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 CAMPP49913 170 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 IFITM2Q01629 132 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 LAGE3Q14657 143 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 COMMD7Q86VX2 200 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 NIT1Q86X76 327 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 ANAPC16Q96DE5 110 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 AMTP48728 403 aa8.78□□□□□ -1
CDK5RAP3-234ENST00000584525 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
CDK5RAP3-234ENST00000584525 GATD1Q8NB37 220 aa8.78□□□□□ -1
CDK5RAP3-234ENST00000584525 SMIM27A0A1W2PRY6 76 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 ANGP03950 147 aaKnown RBP8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 PMCHP20382 165 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 GAGE6Q13070 117 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 AMN1Q8IY45 258 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 UBE2WQ96B02 151 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 MRAP2Q96G30 205 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 TMEM70Q9BUB7 260 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 ST20Q9HBF5 79 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 KLK12Q9UKR0 248 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 COX11Q9Y6N1 276 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 PPP1R17O96001 155 aa8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 APCSP02743 223 aa8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 HBBP68871 147 aa8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 Q0VG73 95 aa8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 RPL39LQ96EH5 51 aaKnown RBP8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 IGKV2D-24A0A075B6R9 120 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 TMEM218A2RU14 115 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 SDHAF1A6NFY7 115 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 IQCJQ1A5X6 159 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 AMMECR1LQ6DCA0 310 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 Q8N3U1 123 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 NTN5Q8WTR8 489 aaPredicted RBP8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 LRCOL1A6NCL2 159 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 I3L3M4 83 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 NCR2O95944 276 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 RAB4AP20338 218 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 CKS2P33552 79 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 MPV17L2Q567V2 206 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 DEFB104AQ8WTQ1 72 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 C1orf43Q9BWL3 253 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 FCER1GP30273 86 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 ATRAIDQ6UW56 229 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 Q8N814 137 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 SEC11CQ9BY50 192 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 FAM30AQ9NZY2 134 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 DNAH8Q96JB1 4490 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 SMKR1H3BMG3 65 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 S100PP25815 95 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 NDUFA5Q16718 116 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 FAM104BQ5XKR9 115 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 Q8N976 141 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 TRBV6-5A0A0K0K1A5 114 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 LINC00862A6NCI5 91 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 RBX1P62877 108 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 SMAGPQ0VAQ4 97 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 MRPL51Q4U2R6 128 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 CLPSL2Q6UWE3 100 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 RNF185Q96GF1 192 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 TMEM101Q96IK0 257 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 KIR2DL4Q99706 377 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 CTDSP1Q9GZU7 261 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 VCYO14598 125 aa8.7□□□□□ -1.02
CDK5RAP3-234ENST00000584525 MIAQ16674 131 aa8.7□□□□□ -1.02
CDK5RAP3-234ENST00000584525 TMEM242Q9NWH2 141 aa8.7□□□□□ -1.02
CDK5RAP3-234ENST00000584525 PPBPP02775 128 aa8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 ADCYAP1P18509 176 aa8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 SUMO2P61956 95 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 LINC00269Q8N2A0 174 aa8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 HMCN2Q8NDA2 5059 aa8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 IGKV2-29A2NJV5 120 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 KRTAP29-1A8MX34 341 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 D6R8Y8 96 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 H7C423 109 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 TCAPO15273 167 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 HLA-DQA1P01909 254 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 DGAT2L7PQ6IED9 249 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 ORMDL3Q8N138 153 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 TMEM18Q96B42 140 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 UBR4Q5T4S7 5183 aa8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 IGKV3OR2-268A0A0C4DH90 116 aa8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 A0A1B0GXF2 115 aa8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 C7orf77A4D0Y5 90 aa8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 RPS10P46783 165 aaKnown RBP8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 REG3AQ06141 175 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms