RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	LPA	P08519	4548 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	IGHV3-64	A0A075B6Q5	118 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877		A0A087WYN8	130 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877		A0A1W2PRE2	83 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	hDV102S1	A0JD36	115 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	SH2D1A	O60880	128 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	NDUFS6	O75380	124 aa	Known RBP	5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	MB	P02144	154 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	S100A6	P06703	90 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	CRIP1	P50238	77 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	RAB4B	P61018	213 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	UBE2G1	P62253	170 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	GAGE6	Q13070	117 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	RPL7L1	Q6DKI1	246 aa	Known RBP	5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	LINC00269	Q8N2A0	174 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	C12orf57	Q99622	126 aa		5.53	□□□□□ -1.52
NUP85-223	ENST00000583877	IGLV10-54	A0A075B6I4	117 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	COLCA2	A8K830	154 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	PEX7	O00628	323 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	PHOX2A	O14813	284 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	ATP6V0C	P27449	155 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	AKR1D1	P51857	326 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	SST	P61278	116 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	TMEM97	Q5BJF2	176 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	FAM162B	Q5T6X4	162 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	PRR27	Q6MZM9	219 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	COX8C	Q7Z4L0	72 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877		Q86TA4	180 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	CBLN2	Q8IUK8	224 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	NEXN-AS1	Q8NBZ9	246 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	SPACA4	Q8TDM5	124 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	C7orf33	Q8WU49	177 aa		5.52	□□□□□ -1.53
NUP85-223	ENST00000583877	LOC100996750	A0A140TA64	210 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	C5orf52	A6NGY3	159 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	CHTF8	P0CG12	524 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	RBX1	P62877	108 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	SERF2	P84101	59 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	GTSF1	Q8WW33	167 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	HIST1H2BA	Q96A08	127 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	PSMG3	Q9BT73	122 aa	Predicted RBP	5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	KRTAP4-6	Q9BYQ5	205 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	PLAC8	Q9NZF1	115 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	ZFP30	Q9Y2G7	519 aa		5.51	□□□□□ -1.53
NUP85-223	ENST00000583877	TRBV25-1	A0A075B6N4	114 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	MUC21	A0A0G2JKD1	596 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	MUC21	A0A140T8X8	626 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	SMIM17	P0DL12	118 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	S100P	P25815	95 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	TAGLN2	P37802	199 aa	Known RBP	5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	RPL35	P42766	123 aa	Known RBP	5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	REG3A	Q06141	175 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	ZNF674	Q2M3X9	581 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	NTM-AS1	Q6ZSK4	140 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	DERL1	Q9BUN8	251 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	RPS10P5	Q9NQ39	176 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	VAX2	Q9UIW0	290 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	KIF25-AS1	Q9Y6Z4	181 aa		5.5	□□□□□ -1.53
NUP85-223	ENST00000583877	TRAV8-4	A0A0B4J246	113 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	TRAV1-1	A0A0B4J248	108 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877		A0A0J9YXV3	536 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	TRBV6-1	A0A0K0K1D8	114 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	C7orf77	A4D0Y5	90 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877		P01737	135 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	SLPI	P03973	132 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	GZMB	P10144	247 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	RAB5A	P20339	215 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	KRTAP10-8	P60410	259 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	PNRC1	Q12796	327 aa	Predicted RBP	5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	SPANXN1	Q5VSR9	72 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	WDR73	Q6P4I2	378 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	FMC1	Q96HJ9	113 aa		5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	EIF5A2	Q9GZV4	153 aa	Known RBP	5.49	□□□□□ -1.53
NUP85-223	ENST00000583877	IGHV1-24	A0A0C4DH33	117 aa		5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	CTXND1	A0A1B0GTU2	59 aa		5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	GAS8-AS1	O95177	125 aa		5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	AKR1C3	P42330	323 aa		5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	SUMO2	P61956	95 aa	Known RBP	5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	PRR3	P79522	188 aa	Known RBP	5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	IQCJ	Q1A5X6	159 aa		5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	MAJIN	Q3KP22	176 aa		5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	CST9LP1	Q5W188	147 aa		5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	TMEM242	Q9NWH2	141 aa		5.48	□□□□□ -1.53
NUP85-223	ENST00000583877	IGKV2-24	A0A0C4DH68	120 aa		5.47	□□□□□ -1.53
NUP85-223	ENST00000583877	GATC	O43716	136 aa	Known RBP	5.47	□□□□□ -1.53
NUP85-223	ENST00000583877	MGP	P08493	103 aa		5.47	□□□□□ -1.53
NUP85-223	ENST00000583877	AKR1C8P	Q5T2L2	129 aa		5.47	□□□□□ -1.53
NUP85-223	ENST00000583877	REG3G	Q6UW15	175 aa		5.47	□□□□□ -1.53
NUP85-223	ENST00000583877	C20orf203	Q8NBC4	194 aa		5.47	□□□□□ -1.53
NUP85-223	ENST00000583877	OR10AG1	Q8NH19	301 aa		5.47	□□□□□ -1.53
NUP85-223	ENST00000583877	IGKV3OR2-268	A0A0C4DH90	116 aa		5.46	□□□□□ -1.54
NUP85-223	ENST00000583877		A0A1B0GUV1	79 aa		5.46	□□□□□ -1.54
NUP85-223	ENST00000583877	PCP4L1	A6NKN8	68 aa		5.46	□□□□□ -1.54
NUP85-223	ENST00000583877	LTA	P01374	205 aa		5.46	□□□□□ -1.54
NUP85-223	ENST00000583877	IFNA1	P01562	189 aa		5.46	□□□□□ -1.54
NUP85-223	ENST00000583877	CXCL1	P09341	107 aa		5.46	□□□□□ -1.54
NUP85-223	ENST00000583877	SNRPE	P62304	92 aa	Known RBP	5.46	□□□□□ -1.54
NUP85-223	ENST00000583877	COX6A2	Q02221	97 aa		5.46	□□□□□ -1.54
NUP85-223	ENST00000583877	ZNF726P1	Q15940	193 aa		5.46	□□□□□ -1.54
NUP85-223	ENST00000583877	SPINK6	Q6UWN8	80 aa		5.46	□□□□□ -1.54

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