RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 TNFRSF18Q9Y5U5 241 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 GAS8-AS1O95177 125 aa13.93□□□□□ -0.18
SRSF1-206ENST00000583741 GATA1P15976 413 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-206ENST00000583741 TMA7Q9Y2S6 64 aaKnown RBP13.93□□□□□ -0.18
SRSF1-206ENST00000583741 H7C1H1 209 aa13.92□□□□□ -0.18
SRSF1-206ENST00000583741 NPYP01303 97 aa13.92□□□□□ -0.18
SRSF1-206ENST00000583741 DNAH10OSP0CZ25 163 aa13.92□□□□□ -0.18
SRSF1-206ENST00000583741 CDPF1Q6NVV7 123 aa13.92□□□□□ -0.18
SRSF1-206ENST00000583741 LAMTOR2Q9Y2Q5 125 aa13.92□□□□□ -0.18
SRSF1-206ENST00000583741 TRGV4A0A0C4DH28 118 aa13.91□□□□□ -0.18
SRSF1-206ENST00000583741 M0QY20 66 aa13.91□□□□□ -0.18
SRSF1-206ENST00000583741 KRTAP10-1P60331 282 aa13.91□□□□□ -0.18
SRSF1-206ENST00000583741 NRACQ8N912 160 aa13.91□□□□□ -0.18
SRSF1-206ENST00000583741 EREGO14944 169 aa13.9□□□□□ -0.18
SRSF1-206ENST00000583741 TNFRSF6BO95407 300 aa13.9□□□□□ -0.18
SRSF1-206ENST00000583741 PPP1R17O96001 155 aa13.9□□□□□ -0.18
SRSF1-206ENST00000583741 Q6ZSN1 163 aa13.9□□□□□ -0.18
SRSF1-206ENST00000583741 C18orf32Q8TCD1 76 aa13.9□□□□□ -0.18
SRSF1-206ENST00000583741 RPL39LQ96EH5 51 aaKnown RBP13.9□□□□□ -0.18
SRSF1-206ENST00000583741 FHL2Q14192 279 aa13.89□□□□□ -0.19
SRSF1-206ENST00000583741 OR10J3Q5JRS4 329 aa13.89□□□□□ -0.19
SRSF1-206ENST00000583741 ICOSQ9Y6W8 199 aa13.88□□□□□ -0.19
SRSF1-206ENST00000583741 A0A087WTM6 91 aa13.87□□□□□ -0.19
SRSF1-206ENST00000583741 K7EQD1 137 aa13.87□□□□□ -0.19
SRSF1-206ENST00000583741 PAX4O43316 350 aa13.87□□□□□ -0.19
SRSF1-206ENST00000583741 IQCJQ1A5X6 159 aa13.87□□□□□ -0.19
SRSF1-206ENST00000583741 NIT2Q9NQR4 276 aa13.87□□□□□ -0.19
SRSF1-206ENST00000583741 TRBV6-4A0A1B0GX49 114 aa13.87□□□□□ -0.19
SRSF1-206ENST00000583741 Q0VG73 95 aa13.87□□□□□ -0.19
SRSF1-206ENST00000583741 SLC25A29Q8N8R3 303 aa13.87□□□□□ -0.19
SRSF1-206ENST00000583741 MAP1LC3AQ9H492 121 aa13.87□□□□□ -0.19
SRSF1-206ENST00000583741 SUMO2P61956 95 aaKnown RBP13.86□□□□□ -0.19
SRSF1-206ENST00000583741 BAGE3Q86Y29 109 aa13.86□□□□□ -0.19
SRSF1-206ENST00000583741 LOC389332A0A1B0GUA5 103 aa13.85□□□□□ -0.19
SRSF1-206ENST00000583741 SMR3BP02814 79 aaPredicted RBP13.85□□□□□ -0.19
SRSF1-206ENST00000583741 NDUFA6P56556 154 aa13.85□□□□□ -0.19
SRSF1-206ENST00000583741 LYPD5Q6UWN5 251 aa13.85□□□□□ -0.19
SRSF1-206ENST00000583741 C20orf78Q9BR46 151 aa13.85□□□□□ -0.19
SRSF1-206ENST00000583741 ST20Q9HBF5 79 aa13.85□□□□□ -0.19
SRSF1-206ENST00000583741 HHLA3Q9XRX5 114 aa13.85□□□□□ -0.19
SRSF1-206ENST00000583741 TRBV10-1A0A0K0K1A3 114 aa13.84□□□□□ -0.19
SRSF1-206ENST00000583741 TRBV6-5A0A0K0K1A5 114 aa13.84□□□□□ -0.19
SRSF1-206ENST00000583741 RHOHQ15669 191 aa13.84□□□□□ -0.19
SRSF1-206ENST00000583741 NEXN-AS1Q8NBZ9 246 aa13.84□□□□□ -0.19
SRSF1-206ENST00000583741 PRO0255Q9UI72 69 aa13.84□□□□□ -0.19
SRSF1-206ENST00000583741 S100A6P06703 90 aa13.83□□□□□ -0.2
SRSF1-206ENST00000583741 NFE4Q86UQ8 179 aa13.83□□□□□ -0.2
SRSF1-206ENST00000583741 DNAJC30Q96LL9 226 aa13.83□□□□□ -0.2
SRSF1-206ENST00000583741 PRADC1Q9BSG0 188 aa13.83□□□□□ -0.2
SRSF1-206ENST00000583741 Q9UF83 564 aa13.83□□□□□ -0.2
SRSF1-206ENST00000583741 PRSS47A8MTI9 375 aa13.82□□□□□ -0.2
SRSF1-206ENST00000583741 CRYBA4P53673 196 aa13.82□□□□□ -0.2
SRSF1-206ENST00000583741 PRSS3P2Q8NHM4 247 aa13.82□□□□□ -0.2
SRSF1-206ENST00000583741 SMIM2Q9BVW6 85 aa13.82□□□□□ -0.2
SRSF1-206ENST00000583741 SDHAF1A6NFY7 115 aa13.81□□□□□ -0.2
SRSF1-206ENST00000583741 PMCHP20382 165 aa13.81□□□□□ -0.2
SRSF1-206ENST00000583741 IFI27P40305 119 aaPredicted RBP13.81□□□□□ -0.2
SRSF1-206ENST00000583741 HAMPP81172 84 aa13.81□□□□□ -0.2
SRSF1-206ENST00000583741 TMEM70Q9BUB7 260 aa13.81□□□□□ -0.2
SRSF1-206ENST00000583741 RPL36AP83881 106 aaKnown RBP13.8□□□□□ -0.2
SRSF1-206ENST00000583741 COA6Q5JTJ3 125 aaKnown RBP13.8□□□□□ -0.2
SRSF1-206ENST00000583741 RPL36ALQ969Q0 106 aaKnown RBP13.8□□□□□ -0.2
SRSF1-206ENST00000583741 NXT2Q9NPJ8 142 aaKnown RBP13.8□□□□□ -0.2
SRSF1-206ENST00000583741 TRBV7-3A0A075B6L6 115 aa13.8□□□□□ -0.2
SRSF1-206ENST00000583741 SERF1AO75920 110 aa13.8□□□□□ -0.2
SRSF1-206ENST00000583741 POLR2KP53803 58 aaKnown RBP13.8□□□□□ -0.2
SRSF1-206ENST00000583741 RPL32P62910 135 aaKnown RBP13.8□□□□□ -0.2
SRSF1-206ENST00000583741 MRPL23Q16540 153 aaKnown RBP13.8□□□□□ -0.2
SRSF1-206ENST00000583741 RNASEKQ6P5S7 137 aaKnown RBP13.8□□□□□ -0.2
SRSF1-206ENST00000583741 FA2HQ7L5A8 372 aa13.8□□□□□ -0.2
SRSF1-206ENST00000583741 NIT1Q86X76 327 aa13.8□□□□□ -0.2
SRSF1-206ENST00000583741 WFDC10BQ8IUB3 73 aa13.8□□□□□ -0.2
SRSF1-206ENST00000583741 Q8N8P6 123 aa13.8□□□□□ -0.2
SRSF1-206ENST00000583741 LOC100131303A0A0U1RQF7 123 aa13.79□□□□□ -0.2
SRSF1-206ENST00000583741 LINC00614P0C842 121 aa13.79□□□□□ -0.2
SRSF1-206ENST00000583741 GCSHP23434 173 aa13.79□□□□□ -0.2
SRSF1-206ENST00000583741 NEGR1Q7Z3B1 354 aa13.79□□□□□ -0.2
SRSF1-206ENST00000583741 URB1-AS1Q96HZ7 61 aa13.79□□□□□ -0.2
SRSF1-206ENST00000583741 TRAV9-2A0A087WT02 112 aa13.78□□□□□ -0.2
SRSF1-206ENST00000583741 GAGE12JA6NER3 117 aa13.78□□□□□ -0.2
SRSF1-206ENST00000583741 LINC00310P59036 64 aa13.78□□□□□ -0.2
SRSF1-206ENST00000583741 GAGE1Q13065 139 aa13.78□□□□□ -0.2
SRSF1-206ENST00000583741 GAGE4Q13068 117 aa13.78□□□□□ -0.2
SRSF1-206ENST00000583741 GAGE5Q13069 117 aa13.78□□□□□ -0.2
SRSF1-206ENST00000583741 GAGE13Q4V321 117 aa13.78□□□□□ -0.2
SRSF1-206ENST00000583741 TRBV27A0A0K0K1C4 114 aa13.77□□□□□ -0.21
SRSF1-206ENST00000583741 VCYO14598 125 aa13.77□□□□□ -0.21
SRSF1-206ENST00000583741 CHCHD1Q96BP2 118 aaKnown RBP13.77□□□□□ -0.21
SRSF1-206ENST00000583741 AP5S1Q9NUS5 200 aa13.77□□□□□ -0.21
SRSF1-206ENST00000583741 DNAH8Q96JB1 4490 aa13.76□□□□□ -0.21
SRSF1-206ENST00000583741 GYPEP15421 78 aa13.76□□□□□ -0.21
SRSF1-206ENST00000583741 I3L3M4 83 aa13.75□□□□□ -0.21
SRSF1-206ENST00000583741 UBE2D3P61077 147 aa13.75□□□□□ -0.21
SRSF1-206ENST00000583741 SNRPEP62304 92 aaKnown RBP13.75□□□□□ -0.21
SRSF1-206ENST00000583741 UBE2D2P62837 147 aa13.75□□□□□ -0.21
SRSF1-206ENST00000583741 KIR2DL4Q99706 377 aa13.75□□□□□ -0.21
SRSF1-206ENST00000583741 NUPR1O60356 82 aa13.74□□□□□ -0.21
SRSF1-206ENST00000583741 HSBP1O75506 76 aa13.74□□□□□ -0.21
SRSF1-206ENST00000583741 LINC01546A6NGU7 62 aa13.74□□□□□ -0.21
SRSF1-206ENST00000583741 C5orf52A6NGY3 159 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms