RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 GAS8-AS1O95177 125 aa4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 CXorf1O96002 111 aa4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 CNBPP62633 177 aaKnown RBP4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 PRR3P79522 188 aaKnown RBP4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 CYCSP99999 105 aaKnown RBP4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 Q0VG73 95 aa4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 SAPCD1Q5SSQ6 148 aa4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 RPL7L1Q6DKI1 246 aaKnown RBP4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 VAX2Q9UIW0 290 aa4.89□□□□□ -1.63
PPP4R1-225ENST00000583438 LTAP01374 205 aa4.88□□□□□ -1.63
PPP4R1-225ENST00000583438 MIAQ16674 131 aa4.88□□□□□ -1.63
PPP4R1-225ENST00000583438 C14orf177Q52M58 125 aa4.88□□□□□ -1.63
PPP4R1-225ENST00000583438 AQP10Q96PS8 301 aa4.88□□□□□ -1.63
PPP4R1-225ENST00000583438 CHCHD5Q9BSY4 110 aa4.88□□□□□ -1.63
PPP4R1-225ENST00000583438 TMEM167BQ9NRX6 74 aa4.88□□□□□ -1.63
PPP4R1-225ENST00000583438 PHLDA3Q9Y5J5 127 aa4.88□□□□□ -1.63
PPP4R1-225ENST00000583438 ALG5Q9Y673 324 aa4.88□□□□□ -1.63
PPP4R1-225ENST00000583438 TRBV6-1A0A0K0K1D8 114 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 K7EQM0 130 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 SNAI2O43623 268 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 SSNA1O43805 119 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 CRPP02741 224 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 TPT1P13693 172 aaKnown RBP4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 FHITP49789 147 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 RAB5CP51148 216 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 RAB4BP61018 213 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 ELOBQ15370 118 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 ZNF56Q15929 161 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 FAM162BQ5T6X4 162 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 ZFP82Q8N141 532 aa4.87□□□□□ -1.63
PPP4R1-225ENST00000583438 A0A096LNI7 61 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 A0A0J9YXV3 536 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 CTXND1A0A1B0GTU2 59 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 IFNA7P01567 189 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 PET100P0DJ07 73 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 LINC01547P58512 204 aaPredicted RBP4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 SSTP61278 116 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 COX6A2Q02221 97 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 REG3AQ06141 175 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 IQCJQ1A5X6 159 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 ACTR3CQ9C0K3 210 aaPredicted RBP4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 TNFSF18Q9UNG2 199 aa4.86□□□□□ -1.63
PPP4R1-225ENST00000583438 A0A0D9SG52 128 aa4.85□□□□□ -1.63
PPP4R1-225ENST00000583438 M0QY20 66 aa4.85□□□□□ -1.63
PPP4R1-225ENST00000583438 SEC11BP0C7V7 166 aa4.85□□□□□ -1.63
PPP4R1-225ENST00000583438 GZMBP10144 247 aa4.85□□□□□ -1.63
PPP4R1-225ENST00000583438 SERF2P84101 59 aa4.85□□□□□ -1.63
PPP4R1-225ENST00000583438 SRSF9Q13242 221 aaKnown RBP eCLIP4.85□□□□□ -1.63
PPP4R1-225ENST00000583438 DERL1Q9BUN8 251 aa4.85□□□□□ -1.63
PPP4R1-225ENST00000583438 CYTL1Q9NRR1 136 aa4.85□□□□□ -1.63
PPP4R1-225ENST00000583438 IGHV3-64A0A075B6Q5 118 aa4.84□□□□□ -1.63
PPP4R1-225ENST00000583438 IGKV2-24A0A0C4DH68 120 aa4.84□□□□□ -1.63
PPP4R1-225ENST00000583438 HIGD2BQ4VC39 106 aa4.84□□□□□ -1.63
PPP4R1-225ENST00000583438 HIST1H2BAQ96A08 127 aa4.84□□□□□ -1.63
PPP4R1-225ENST00000583438 LINC00526Q96FQ7 95 aa4.84□□□□□ -1.63
PPP4R1-225ENST00000583438 FMC1Q96HJ9 113 aa4.84□□□□□ -1.63
PPP4R1-225ENST00000583438 ZFP30Q9Y2G7 519 aa4.84□□□□□ -1.63
PPP4R1-225ENST00000583438 MAP1LC3B2A6NCE7 125 aa4.83□□□□□ -1.64
PPP4R1-225ENST00000583438 TSHBP01222 138 aa4.83□□□□□ -1.64
PPP4R1-225ENST00000583438 OR5AL1P0C617 328 aa4.83□□□□□ -1.64
PPP4R1-225ENST00000583438 LINC00299Q6ZSB3 139 aa4.83□□□□□ -1.64
PPP4R1-225ENST00000583438 LYPD6BQ8NI32 183 aa4.83□□□□□ -1.64
PPP4R1-225ENST00000583438 S100ZQ8WXG8 99 aa4.83□□□□□ -1.64
PPP4R1-225ENST00000583438 MAP1LC3BQ9GZQ8 125 aa4.83□□□□□ -1.64
PPP4R1-225ENST00000583438 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 TRBV25-1A0A075B6N4 114 aa4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 MBP02144 154 aa4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 CXCL1P09341 107 aa4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 IGLC6P0CF74 106 aa4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 NKX2-5P52952 324 aaPredicted RBP4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 DEFA1P59665 94 aa4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 MAJINQ3KP22 176 aa4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 KCNIP4Q6PIL6 250 aa4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 RNF185Q96GF1 192 aa4.82□□□□□ -1.64
PPP4R1-225ENST00000583438 IGHV1-24A0A0C4DH33 117 aa4.81□□□□□ -1.64
PPP4R1-225ENST00000583438 A0A1B0GV50 99 aa4.81□□□□□ -1.64
PPP4R1-225ENST00000583438 AKR1C3P42330 323 aa4.81□□□□□ -1.64
PPP4R1-225ENST00000583438 CST9LP1Q5W188 147 aa4.81□□□□□ -1.64
PPP4R1-225ENST00000583438 KRTAP11-1Q8IUC1 163 aa4.81□□□□□ -1.64
PPP4R1-225ENST00000583438 STPG4Q8N801 248 aa4.81□□□□□ -1.64
PPP4R1-225ENST00000583438 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
PPP4R1-225ENST00000583438 SMLR1H3BR10 107 aa4.8□□□□□ -1.64
PPP4R1-225ENST00000583438 H7C1H1 209 aa4.8□□□□□ -1.64
PPP4R1-225ENST00000583438 MGPP08493 103 aa4.8□□□□□ -1.64
PPP4R1-225ENST00000583438 UBE2G1P62253 170 aa4.8□□□□□ -1.64
PPP4R1-225ENST00000583438 GTSF1Q8WW33 167 aa4.8□□□□□ -1.64
PPP4R1-225ENST00000583438 NDUFA13Q9P0J0 144 aa4.8□□□□□ -1.64
PPP4R1-225ENST00000583438 TRBV20OR9-2A0A075B6H5 130 aa4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 FXYD6-FXYD2A0A087WZ82 144 aa4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 TRAV26-2A0A0B4J265 109 aa4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 IGKV3OR2-268A0A0C4DH90 116 aa4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 A0A1W2PNN7 141 aa4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 C19orf71A6NCJ1 209 aa4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 NDUFS6O75380 124 aaKnown RBP4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 FOXA3P55318 350 aaPredicted RBP4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 CCL20P78556 96 aa4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 SPANXN1Q5VSR9 72 aa4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 TMEM243Q9BU79 118 aa4.79□□□□□ -1.64
PPP4R1-225ENST00000583438 TRAV8-4A0A0B4J246 113 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms