RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 FRAS1Q86XX4 4008 aa16.52■□□□□ 0.24
MIR3960-201ENST00000583311 UBE2L6O14933 153 aa16.51■□□□□ 0.23
MIR3960-201ENST00000583311 SUMO2P61956 95 aaKnown RBP16.51■□□□□ 0.23
MIR3960-201ENST00000583311 NRACQ8N912 160 aa16.51■□□□□ 0.23
MIR3960-201ENST00000583311 D6R8Y8 96 aa16.5■□□□□ 0.23
MIR3960-201ENST00000583311 VCYO14598 125 aa16.5■□□□□ 0.23
MIR3960-201ENST00000583311 APCSP02743 223 aa16.5■□□□□ 0.23
MIR3960-201ENST00000583311 POLR2KP53803 58 aaKnown RBP16.5■□□□□ 0.23
MIR3960-201ENST00000583311 ORMDL3Q8N138 153 aa16.5■□□□□ 0.23
MIR3960-201ENST00000583311 Q8N3U1 123 aa16.5■□□□□ 0.23
MIR3960-201ENST00000583311 C20orf78Q9BR46 151 aa16.5■□□□□ 0.23
MIR3960-201ENST00000583311 TRBV24-1A0A075B6N3 115 aa16.49■□□□□ 0.23
MIR3960-201ENST00000583311 TRAV8-3A0A0A6YYJ7 113 aa16.49■□□□□ 0.23
MIR3960-201ENST00000583311 TRBV27A0A0K0K1C4 114 aa16.49■□□□□ 0.23
MIR3960-201ENST00000583311 PHOX2AO14813 284 aa16.49■□□□□ 0.23
MIR3960-201ENST00000583311 GAGE6Q13070 117 aa16.49■□□□□ 0.23
MIR3960-201ENST00000583311 MPV17L2Q567V2 206 aa16.48■□□□□ 0.23
MIR3960-201ENST00000583311 ATRAIDQ6UW56 229 aa16.48■□□□□ 0.23
MIR3960-201ENST00000583311 DEFB104AQ8WTQ1 72 aa16.48■□□□□ 0.23
MIR3960-201ENST00000583311 KLK12Q9UKR0 248 aa16.48■□□□□ 0.23
MIR3960-201ENST00000583311 TNFRSF6BO95407 300 aa16.47■□□□□ 0.23
MIR3960-201ENST00000583311 COX19Q49B96 90 aa16.47■□□□□ 0.23
MIR3960-201ENST00000583311 TMEM136Q6ZRR5 245 aa16.47■□□□□ 0.23
MIR3960-201ENST00000583311 SLC7A5P1Q8MH63 180 aa16.47■□□□□ 0.23
MIR3960-201ENST00000583311 KIR2DL4Q99706 377 aa16.47■□□□□ 0.23
MIR3960-201ENST00000583311 Q9HAA7 133 aa16.47■□□□□ 0.23
MIR3960-201ENST00000583311 DNAH17Q9UFH2 4485 aa16.47■□□□□ 0.23
MIR3960-201ENST00000583311 Q6ZRN7 208 aaPredicted RBP16.46■□□□□ 0.23
MIR3960-201ENST00000583311 H7C423 109 aa16.45■□□□□ 0.22
MIR3960-201ENST00000583311 ANGP03950 147 aaKnown RBP16.45■□□□□ 0.22
MIR3960-201ENST00000583311 RPL32P62910 135 aaKnown RBP16.45■□□□□ 0.22
MIR3960-201ENST00000583311 RMI2Q96E14 147 aa16.45■□□□□ 0.22
MIR3960-201ENST00000583311 LAMTOR2Q9Y2Q5 125 aa16.45■□□□□ 0.22
MIR3960-201ENST00000583311 TCAPO15273 167 aa16.44■□□□□ 0.22
MIR3960-201ENST00000583311 TSHBP01222 138 aa16.44■□□□□ 0.22
MIR3960-201ENST00000583311 CRPP02741 224 aa16.44■□□□□ 0.22
MIR3960-201ENST00000583311 FCER1GP30273 86 aa16.44■□□□□ 0.22
MIR3960-201ENST00000583311 RBX1P62877 108 aa16.44■□□□□ 0.22
MIR3960-201ENST00000583311 TNP2Q05952 138 aa16.44■□□□□ 0.22
MIR3960-201ENST00000583311 Q0VG73 95 aa16.44■□□□□ 0.22
MIR3960-201ENST00000583311 PRELID3AQ96N28 172 aa16.44■□□□□ 0.22
MIR3960-201ENST00000583311 TM2D2Q9BX73 214 aa16.44■□□□□ 0.22
MIR3960-201ENST00000583311 A0A1B0GUV1 79 aa16.43■□□□□ 0.22
MIR3960-201ENST00000583311 PSCAO43653 123 aa16.43■□□□□ 0.22
MIR3960-201ENST00000583311 HLA-DQA1P01909 254 aa16.43■□□□□ 0.22
MIR3960-201ENST00000583311 Q8N976 141 aa16.43■□□□□ 0.22
MIR3960-201ENST00000583311 NPYP01303 97 aa16.42■□□□□ 0.22
MIR3960-201ENST00000583311 UBE2WQ96B02 151 aa16.42■□□□□ 0.22
MIR3960-201ENST00000583311 GNB1LQ9BYB4 327 aa16.42■□□□□ 0.22
MIR3960-201ENST00000583311 COX11Q9Y6N1 276 aa16.42■□□□□ 0.22
MIR3960-201ENST00000583311 AMMECR1LQ6DCA0 310 aa16.41■□□□□ 0.22
MIR3960-201ENST00000583311 SMIM2Q9BVW6 85 aa16.41■□□□□ 0.22
MIR3960-201ENST00000583311 FAT2Q9NYQ8 4349 aa16.4■□□□□ 0.22
MIR3960-201ENST00000583311 EREGO14944 169 aa16.39■□□□□ 0.21
MIR3960-201ENST00000583311 MT-ND6P03923 174 aa16.39■□□□□ 0.21
MIR3960-201ENST00000583311 ESDP10768 282 aa16.39■□□□□ 0.21
MIR3960-201ENST00000583311 MAP1LC3AQ9H492 121 aa16.39■□□□□ 0.21
MIR3960-201ENST00000583311 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.38■□□□□ 0.21
MIR3960-201ENST00000583311 IGKV2-29A2NJV5 120 aaPredicted RBP16.38■□□□□ 0.21
MIR3960-201ENST00000583311 SMAGPQ0VAQ4 97 aa16.38■□□□□ 0.21
MIR3960-201ENST00000583311 ZNF25P17030 456 aaPredicted RBP16.37■□□□□ 0.21
MIR3960-201ENST00000583311 MIAQ16674 131 aa16.37■□□□□ 0.21
MIR3960-201ENST00000583311 RNASEKQ6P5S7 137 aaKnown RBP16.37■□□□□ 0.21
MIR3960-201ENST00000583311 C20orf203Q8NBC4 194 aa16.37■□□□□ 0.21
MIR3960-201ENST00000583311 A0A1B0GVY2 172 aa16.36■□□□□ 0.21
MIR3960-201ENST00000583311 FGF6P10767 208 aa16.36■□□□□ 0.21
MIR3960-201ENST00000583311 ENHOQ6UWT2 76 aa16.36■□□□□ 0.21
MIR3960-201ENST00000583311 LINC00269Q8N2A0 174 aa16.36■□□□□ 0.21
MIR3960-201ENST00000583311 TMEM18Q96B42 140 aa16.36■□□□□ 0.21
MIR3960-201ENST00000583311 TMEM101Q96IK0 257 aa16.36■□□□□ 0.21
MIR3960-201ENST00000583311 PRR34Q9NV39 138 aa16.36■□□□□ 0.21
MIR3960-201ENST00000583311 IGLV4-60A0A075B6I1 120 aa16.35■□□□□ 0.21
MIR3960-201ENST00000583311 IGKV2D-24A0A075B6R9 120 aa16.35■□□□□ 0.21
MIR3960-201ENST00000583311 PRSS47A8MTI9 375 aa16.35■□□□□ 0.21
MIR3960-201ENST00000583311 C1orf43Q9BWL3 253 aa16.35■□□□□ 0.21
MIR3960-201ENST00000583311 RAB5AP20339 215 aa16.34■□□□□ 0.21
MIR3960-201ENST00000583311 TGIF2-C20orf24A0A0A6YYL0 155 aa16.33■□□□□ 0.2
MIR3960-201ENST00000583311 REG3AQ06141 175 aa16.33■□□□□ 0.2
MIR3960-201ENST00000583311 LOC389332A0A1B0GUA5 103 aa16.32■□□□□ 0.2
MIR3960-201ENST00000583311 CLPSL2Q6UWE3 100 aa16.32■□□□□ 0.2
MIR3960-201ENST00000583311 MRPL52Q86TS9 123 aaKnown RBP16.32■□□□□ 0.2
MIR3960-201ENST00000583311 HECTD4Q9Y4D8 3996 aa16.31■□□□□ 0.2
MIR3960-201ENST00000583311 KIAA1644Q3SXP7 199 aa16.31■□□□□ 0.2
MIR3960-201ENST00000583311 OR5A1Q8NGJ0 315 aa16.31■□□□□ 0.2
MIR3960-201ENST00000583311 MRPL18Q9H0U6 180 aaKnown RBP16.31■□□□□ 0.2
MIR3960-201ENST00000583311 SMCO4Q9NRQ5 59 aa16.31■□□□□ 0.2
MIR3960-201ENST00000583311 A0A087WTM6 91 aa16.3■□□□□ 0.2
MIR3960-201ENST00000583311 TRAV8-4A0A0B4J246 113 aa16.3■□□□□ 0.2
MIR3960-201ENST00000583311 FABP9Q0Z7S8 132 aa16.3■□□□□ 0.2
MIR3960-201ENST00000583311 DGAT2L7PQ6IED9 249 aa16.3■□□□□ 0.2
MIR3960-201ENST00000583311 EPPK1P58107 5090 aaKnown RBP16.29■□□□□ 0.2
MIR3960-201ENST00000583311 Q8N8P6 123 aa16.29■□□□□ 0.2
MIR3960-201ENST00000583311 NXT2Q9NPJ8 142 aaKnown RBP16.29■□□□□ 0.2
MIR3960-201ENST00000583311 K7EMI3 77 aa16.28■□□□□ 0.2
MIR3960-201ENST00000583311 CSDC2Q9Y534 153 aaKnown RBP16.28■□□□□ 0.2
MIR3960-201ENST00000583311 TRAPPC1Q9Y5R8 145 aa16.28■□□□□ 0.2
MIR3960-201ENST00000583311 PKD1P98161 4303 aa16.28■□□□□ 0.2
MIR3960-201ENST00000583311 LRCOL1A6NCL2 159 aa16.26■□□□□ 0.19
MIR3960-201ENST00000583311 ALKBH7Q9BT30 221 aaPredicted RBP16.26■□□□□ 0.19
MIR3960-201ENST00000583311 TIMM21Q9BVV7 248 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 264 ms