RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 DAZ4Q86SG3 579 aaKnown RBP8.9□□□□□ -0.98
SS18-222ENST00000582792 BAALCQ8WXS3 180 aa8.9□□□□□ -0.98
SS18-222ENST00000582792 IMMP2LQ96T52 175 aa8.9□□□□□ -0.98
SS18-222ENST00000582792 CHAC1Q9BUX1 264 aa8.9□□□□□ -0.98
SS18-222ENST00000582792 DAZ3Q9NR90 486 aaKnown RBP8.9□□□□□ -0.98
SS18-222ENST00000582792 NDUFA5Q16718 116 aa8.89□□□□□ -0.99
SS18-222ENST00000582792 TMEM191AQ9H0A3 160 aa8.89□□□□□ -0.99
SS18-222ENST00000582792 TMEM242Q9NWH2 141 aa8.89□□□□□ -0.99
SS18-222ENST00000582792 PLA2G2DQ9UNK4 145 aa8.89□□□□□ -0.99
SS18-222ENST00000582792 F5H697 171 aa8.88□□□□□ -0.99
SS18-222ENST00000582792 S100A8P05109 93 aa8.88□□□□□ -0.99
SS18-222ENST00000582792 RPL36AP83881 106 aaKnown RBP8.88□□□□□ -0.99
SS18-222ENST00000582792 RHEBQ15382 184 aa8.88□□□□□ -0.99
SS18-222ENST00000582792 ATP5L2Q7Z4Y8 100 aa8.88□□□□□ -0.99
SS18-222ENST00000582792 Q8N976 141 aa8.88□□□□□ -0.99
SS18-222ENST00000582792 CIRBP-AS1Q8TBR5 109 aa8.88□□□□□ -0.99
SS18-222ENST00000582792 RPL36ALQ969Q0 106 aaKnown RBP8.88□□□□□ -0.99
SS18-222ENST00000582792 DNAJC30Q96LL9 226 aa8.88□□□□□ -0.99
SS18-222ENST00000582792 TRBV7-3A0A075B6L6 115 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 A0A087WWC5 75 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 GAGE12JA6NER3 117 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 M0QY20 66 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 MGPP08493 103 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 GAGE1Q13065 139 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 GAGE4Q13068 117 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 GAGE5Q13069 117 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 GAGE13Q4V321 117 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 SUMO4Q6EEV6 95 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 GATD1Q8NB37 220 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 NEXN-AS1Q8NBZ9 246 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 RMI2Q96E14 147 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 PKHD1L1Q86WI1 4243 aa8.87□□□□□ -0.99
SS18-222ENST00000582792 TRAV9-1A0A075B6T8 112 aa8.86□□□□□ -0.99
SS18-222ENST00000582792 A0A1B0GXF2 115 aa8.86□□□□□ -0.99
SS18-222ENST00000582792 UBE2D3P61077 147 aa8.86□□□□□ -0.99
SS18-222ENST00000582792 UBE2D2P62837 147 aa8.86□□□□□ -0.99
SS18-222ENST00000582792 CLRN3Q8NCR9 226 aa8.86□□□□□ -0.99
SS18-222ENST00000582792 HBBP68871 147 aa8.85□□□□□ -0.99
SS18-222ENST00000582792 RASL11AQ6T310 242 aa8.85□□□□□ -0.99
SS18-222ENST00000582792 SVBPQ8N300 66 aa8.85□□□□□ -0.99
SS18-222ENST00000582792 Q9UF83 564 aa8.85□□□□□ -0.99
SS18-222ENST00000582792 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 C7orf77A4D0Y5 90 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 SNAPINO95295 136 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 TMEM97Q5BJF2 176 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 KCNIP4Q6PIL6 250 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 NIT1Q86X76 327 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.84□□□□□ -0.99
SS18-222ENST00000582792 MRAP2Q96G30 205 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 RNF185Q96GF1 192 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 BTF3L4Q96K17 158 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 NIT2Q9NQR4 276 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 URGCP-MRPS24S4R325 110 aa8.84□□□□□ -0.99
SS18-222ENST00000582792 APOC3P02656 99 aa8.83□□□□□ -1
SS18-222ENST00000582792 RAB4AP20338 218 aa8.83□□□□□ -1
SS18-222ENST00000582792 FAM104BQ5XKR9 115 aa8.83□□□□□ -1
SS18-222ENST00000582792 KLK12Q9UKR0 248 aa8.83□□□□□ -1
SS18-222ENST00000582792 TRBV6-5A0A0K0K1A5 114 aa8.82□□□□□ -1
SS18-222ENST00000582792 PPP1R17O96001 155 aa8.82□□□□□ -1
SS18-222ENST00000582792 MRPL54Q6P161 138 aaKnown RBP8.82□□□□□ -1
SS18-222ENST00000582792 S100PP25815 95 aa8.81□□□□□ -1
SS18-222ENST00000582792 CAMPP49913 170 aa8.81□□□□□ -1
SS18-222ENST00000582792 ATRAIDQ6UW56 229 aa8.81□□□□□ -1
SS18-222ENST00000582792 AMN1Q8IY45 258 aa8.81□□□□□ -1
SS18-222ENST00000582792 SLC7A5P1Q8MH63 180 aa8.81□□□□□ -1
SS18-222ENST00000582792 UBE2WQ96B02 151 aa8.81□□□□□ -1
SS18-222ENST00000582792 RPS10P5Q9NQ39 176 aa8.81□□□□□ -1
SS18-222ENST00000582792 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
SS18-222ENST00000582792 ELOBQ15370 118 aa8.8□□□□□ -1
SS18-222ENST00000582792 CHCHD7Q9BUK0 85 aa8.8□□□□□ -1
SS18-222ENST00000582792 A0A087WX48 190 aa8.79□□□□□ -1
SS18-222ENST00000582792 TRAV26-2A0A0B4J265 109 aa8.79□□□□□ -1
SS18-222ENST00000582792 PPBPP02775 128 aa8.79□□□□□ -1
SS18-222ENST00000582792 COX19Q49B96 90 aa8.79□□□□□ -1
SS18-222ENST00000582792 MRPL51Q4U2R6 128 aaKnown RBP8.79□□□□□ -1
SS18-222ENST00000582792 C14orf177Q52M58 125 aa8.79□□□□□ -1
SS18-222ENST00000582792 TRBV6-8A0A0A6YYG3 113 aa8.78□□□□□ -1
SS18-222ENST00000582792 PHOX2AO14813 284 aa8.78□□□□□ -1
SS18-222ENST00000582792 HNRNPA3P51991 378 aaKnown RBP8.78□□□□□ -1
SS18-222ENST00000582792 PKIAP61925 76 aa8.78□□□□□ -1
SS18-222ENST00000582792 Q0VG73 95 aa8.78□□□□□ -1
SS18-222ENST00000582792 TRBV24-1A0A075B6N3 115 aa8.77□□□□□ -1.01
SS18-222ENST00000582792 NCR2O95944 276 aa8.77□□□□□ -1.01
SS18-222ENST00000582792 RPL39LQ96EH5 51 aaKnown RBP8.77□□□□□ -1.01
SS18-222ENST00000582792 ST20Q9HBF5 79 aa8.77□□□□□ -1.01
SS18-222ENST00000582792 SDHAF1A6NFY7 115 aa8.76□□□□□ -1.01
SS18-222ENST00000582792 CKS2P33552 79 aa8.76□□□□□ -1.01
SS18-222ENST00000582792 POLR2KP53803 58 aaKnown RBP8.76□□□□□ -1.01
SS18-222ENST00000582792 RPL32P62910 135 aaKnown RBP8.76□□□□□ -1.01
SS18-222ENST00000582792 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
SS18-222ENST00000582792 NRACQ8N912 160 aa8.76□□□□□ -1.01
SS18-222ENST00000582792 C20orf78Q9BR46 151 aa8.76□□□□□ -1.01
SS18-222ENST00000582792 C1orf43Q9BWL3 253 aa8.76□□□□□ -1.01
SS18-222ENST00000582792 TRBV25-1A0A075B6N4 114 aa8.75□□□□□ -1.01
SS18-222ENST00000582792 IGHV1-24A0A0C4DH33 117 aa8.75□□□□□ -1.01
SS18-222ENST00000582792 TRBV27A0A0K0K1C4 114 aa8.75□□□□□ -1.01
SS18-222ENST00000582792 COTL1Q14019 142 aa8.75□□□□□ -1.01
SS18-222ENST00000582792 ENHOQ6UWT2 76 aa8.75□□□□□ -1.01
SS18-222ENST00000582792 TMEM136Q6ZRR5 245 aa8.75□□□□□ -1.01
SS18-222ENST00000582792 NTM-AS1Q6ZSK4 140 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms