RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 KIAA1644Q3SXP7 199 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 TDRG1Q3Y452 100 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 LINC01556Q5JQF7 62 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 SAPCD1Q5SSQ6 148 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 DNLZQ5SXM8 178 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 OR2D3Q8NGH3 330 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 MRPL53Q96EL3 112 aaKnown RBP5.03□□□□□ -1.6
CCDC47-205ENST00000582331 PACRGQ96M98 296 aaPredicted RBP5.03□□□□□ -1.6
CCDC47-205ENST00000582331 CHAC1Q9BUX1 264 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 NIT2Q9NQR4 276 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.02□□□□□ -1.61
CCDC47-205ENST00000582331 KLLNB2CW77 178 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 SH2D1AO60880 128 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 APCSP02743 223 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 GZMBP10144 247 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 RAB4BP61018 213 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 ERCC8Q13216 396 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 WFDC2Q14508 124 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 JOSD1Q15040 202 aaPredicted RBP5.02□□□□□ -1.61
CCDC47-205ENST00000582331 LINC01620Q4KN68 170 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 SH2D6Q7Z4S9 175 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 GATD1Q8NB37 220 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 CIRBP-AS1Q8TBR5 109 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 TMEM18Q96B42 140 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 ZNF479Q96JC4 524 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 PGLYRP4Q96LB8 373 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 LINC00477Q96M19 166 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 AGPAT4-IT1Q9H0P7 198 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 LRP2P98164 4655 aa5.02□□□□□ -1.61
CCDC47-205ENST00000582331 IGHV1OR15-1A0A075B7D0 117 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 TRAV8-6A0A0B4J262 113 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 PCP4L1A6NKN8 68 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 LECT2O14960 151 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 SERF1AO75920 110 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 GPX1P07203 203 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 ZNF80P51504 273 aaPredicted RBP5.01□□□□□ -1.61
CCDC47-205ENST00000582331 TIRAPP58753 221 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 HBBP68871 147 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 S100A12P80511 92 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 OR10J3Q5JRS4 329 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 Q8TAT8 98 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 FAM19A4Q96LR4 140 aa5.01□□□□□ -1.61
CCDC47-205ENST00000582331 ALKBH7Q9BT30 221 aaPredicted RBP5.01□□□□□ -1.61
CCDC47-205ENST00000582331 IGHV3-30P01768 117 aa5□□□□□ -1.61
CCDC47-205ENST00000582331 IGHV3-33P01772 117 aa5□□□□□ -1.61
CCDC47-205ENST00000582331 IGHV3-30-3P0DP02 117 aa5□□□□□ -1.61
CCDC47-205ENST00000582331 IGHV3-30-5P0DP03 117 aa5□□□□□ -1.61
CCDC47-205ENST00000582331 CAMPP49913 170 aa5□□□□□ -1.61
CCDC47-205ENST00000582331 RPL37AP61513 92 aaKnown RBP5□□□□□ -1.61
CCDC47-205ENST00000582331 FAM162BQ5T6X4 162 aa5□□□□□ -1.61
CCDC47-205ENST00000582331 C9orf47Q6ZRZ4 202 aa5□□□□□ -1.61
CCDC47-205ENST00000582331 BAGE3Q86Y29 109 aa5□□□□□ -1.61
CCDC47-205ENST00000582331 C18orf32Q8TCD1 76 aa5□□□□□ -1.61
CCDC47-205ENST00000582331 LOC100131303A0A0U1RQF7 123 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 A0A1B0GUT8 65 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 A0A1B0GW15 77 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 ARMS2P0C7Q2 107 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 IGLC6P0CF74 106 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 MT1HL1P0DM35 61 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 ASIPP42127 132 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 HNRNPA3P51991 378 aaKnown RBP4.99□□□□□ -1.61
CCDC47-205ENST00000582331 ZNF138P52744 262 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 RPS20P60866 119 aaKnown RBP4.99□□□□□ -1.61
CCDC47-205ENST00000582331 RIGQ13278 110 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 LAGE3Q14657 143 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 IQCJQ1A5X6 159 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 Q6AWC8 147 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 RASL10AQ92737 203 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 URB1-AS1Q96HZ7 61 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 NDFIP1Q9BT67 221 aa4.99□□□□□ -1.61
CCDC47-205ENST00000582331 TMSB15BA0A087X1C1 80 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 TRAV8-3A0A0A6YYJ7 113 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 TRAV4A0A0B4J268 109 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 FABP5P3A8MUU1 101 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 CTRLP40313 264 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 LYZL1Q6UWQ5 148 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 Q6ZQT7 251 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 ZFAND2AQ8N6M9 145 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 OR4C5Q8NGB2 326 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 BAALCQ8WXS3 180 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 SPXQ9BT56 116 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 C11orf21Q9P2W6 132 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 LENEPQ9Y5L5 61 aa4.98□□□□□ -1.61
CCDC47-205ENST00000582331 TNXBP22105 4242 aa4.97□□□□□ -1.61
CCDC47-205ENST00000582331 IGKV3D-20A0A0C4DH25 116 aa4.97□□□□□ -1.61
CCDC47-205ENST00000582331 MUC21Q5SSG8 566 aa4.97□□□□□ -1.61
CCDC47-205ENST00000582331 TMEM78Q5T7P6 136 aa4.97□□□□□ -1.61
CCDC47-205ENST00000582331 PRR9Q5T870 116 aa4.97□□□□□ -1.61
CCDC47-205ENST00000582331 LELP1Q5T871 98 aa4.97□□□□□ -1.61
CCDC47-205ENST00000582331 NIT1Q86X76 327 aa4.97□□□□□ -1.61
CCDC47-205ENST00000582331 Q8N976 141 aa4.97□□□□□ -1.61
CCDC47-205ENST00000582331 KCNS1Q96KK3 526 aa4.97□□□□□ -1.61
CCDC47-205ENST00000582331 IGHV3-16A0A0C4DH30 117 aa4.96□□□□□ -1.62
CCDC47-205ENST00000582331 C9orf118A6NHY6 69 aa4.96□□□□□ -1.62
CCDC47-205ENST00000582331 LINC00587B1AMM8 73 aa4.96□□□□□ -1.62
CCDC47-205ENST00000582331 FAM104BQ5XKR9 115 aa4.96□□□□□ -1.62
CCDC47-205ENST00000582331 Q6ZRU5 148 aa4.96□□□□□ -1.62
CCDC47-205ENST00000582331 FER1L6-AS1Q8NA97 138 aa4.96□□□□□ -1.62
CCDC47-205ENST00000582331 ATP6V0E2Q8NHE4 81 aa4.96□□□□□ -1.62
CCDC47-205ENST00000582331 CNFNQ9BYD5 112 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms