RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 GNG13Q9P2W3 67 aa9.29□□□□□ -0.92
CDC42EP4-208ENST00000582303 A0A087WYN8 130 aa9.28□□□□□ -0.92
CDC42EP4-208ENST00000582303 PANO1I0J062 215 aa9.28□□□□□ -0.92
CDC42EP4-208ENST00000582303 IFNA1P01562 189 aa9.28□□□□□ -0.92
CDC42EP4-208ENST00000582303 RAB5CP51148 216 aa9.28□□□□□ -0.92
CDC42EP4-208ENST00000582303 EIF5AL1Q6IS14 154 aaKnown RBP9.28□□□□□ -0.92
CDC42EP4-208ENST00000582303 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
CDC42EP4-208ENST00000582303 PKIGQ9Y2B9 76 aa9.28□□□□□ -0.92
CDC42EP4-208ENST00000582303 IGLV4-60A0A075B6I1 120 aa9.27□□□□□ -0.93
CDC42EP4-208ENST00000582303 PDE6DO43924 150 aa9.27□□□□□ -0.93
CDC42EP4-208ENST00000582303 CCL20P78556 96 aa9.27□□□□□ -0.93
CDC42EP4-208ENST00000582303 TRAV1-1A0A0B4J248 108 aa9.26□□□□□ -0.93
CDC42EP4-208ENST00000582303 C19orf71A6NCJ1 209 aa9.26□□□□□ -0.93
CDC42EP4-208ENST00000582303 RPS10P46783 165 aaKnown RBP9.26□□□□□ -0.93
CDC42EP4-208ENST00000582303 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
CDC42EP4-208ENST00000582303 SMLR1H3BR10 107 aa9.25□□□□□ -0.93
CDC42EP4-208ENST00000582303 MT1HL1P0DM35 61 aa9.25□□□□□ -0.93
CDC42EP4-208ENST00000582303 NTF3P20783 257 aa9.25□□□□□ -0.93
CDC42EP4-208ENST00000582303 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
CDC42EP4-208ENST00000582303 LYZL1Q6UWQ5 148 aa9.25□□□□□ -0.93
CDC42EP4-208ENST00000582303 SMIM15Q7Z3B0 74 aa9.25□□□□□ -0.93
CDC42EP4-208ENST00000582303 C9orf62Q8N4C0 152 aa9.25□□□□□ -0.93
CDC42EP4-208ENST00000582303 H7C423 109 aa9.24□□□□□ -0.93
CDC42EP4-208ENST00000582303 NDUFS6O75380 124 aaKnown RBP9.24□□□□□ -0.93
CDC42EP4-208ENST00000582303 MEF2BQ02080 365 aaPredicted RBP9.24□□□□□ -0.93
CDC42EP4-208ENST00000582303 TEX261Q6UWH6 196 aa9.24□□□□□ -0.93
CDC42EP4-208ENST00000582303 LINC00474Q9P2X8 69 aa9.24□□□□□ -0.93
CDC42EP4-208ENST00000582303 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
CDC42EP4-208ENST00000582303 NCR2O95944 276 aa9.23□□□□□ -0.93
CDC42EP4-208ENST00000582303 CHTF8P0CG12 524 aa9.23□□□□□ -0.93
CDC42EP4-208ENST00000582303 TWIST1Q15672 202 aa9.23□□□□□ -0.93
CDC42EP4-208ENST00000582303 GFRA4Q9GZZ7 299 aa9.23□□□□□ -0.93
CDC42EP4-208ENST00000582303 MED9Q9NWA0 146 aa9.23□□□□□ -0.93
CDC42EP4-208ENST00000582303 PHOX2AO14813 284 aa9.22□□□□□ -0.93
CDC42EP4-208ENST00000582303 SLPIP03973 132 aa9.22□□□□□ -0.93
CDC42EP4-208ENST00000582303 TAGLN2P37802 199 aaKnown RBP9.22□□□□□ -0.93
CDC42EP4-208ENST00000582303 CTRLP40313 264 aa9.22□□□□□ -0.93
CDC42EP4-208ENST00000582303 COX6A2Q02221 97 aa9.22□□□□□ -0.93
CDC42EP4-208ENST00000582303 GTSF1Q8WW33 167 aa9.22□□□□□ -0.93
CDC42EP4-208ENST00000582303 IGKV3OR2-268A0A0C4DH90 116 aa9.21□□□□□ -0.94
CDC42EP4-208ENST00000582303 RAB19A4D1S5 217 aa9.21□□□□□ -0.94
CDC42EP4-208ENST00000582303 MAJINQ3KP22 176 aa9.21□□□□□ -0.94
CDC42EP4-208ENST00000582303 RNASEKQ6P5S7 137 aaKnown RBP9.21□□□□□ -0.94
CDC42EP4-208ENST00000582303 C15orf56Q8N910 161 aa9.21□□□□□ -0.94
CDC42EP4-208ENST00000582303 CNFNQ9BYD5 112 aa9.21□□□□□ -0.94
CDC42EP4-208ENST00000582303 APCSP02743 223 aa9.2□□□□□ -0.94
CDC42EP4-208ENST00000582303 ZNF25P17030 456 aaPredicted RBP9.2□□□□□ -0.94
CDC42EP4-208ENST00000582303 CHCHD10Q8WYQ3 142 aaPredicted RBP9.2□□□□□ -0.94
CDC42EP4-208ENST00000582303 BTF3L4Q96K17 158 aa9.2□□□□□ -0.94
CDC42EP4-208ENST00000582303 FAM210AQ96ND0 272 aa9.2□□□□□ -0.94
CDC42EP4-208ENST00000582303 GVQW2A0A096LPI5 108 aaPredicted RBP9.19□□□□□ -0.94
CDC42EP4-208ENST00000582303 IGKV2-24A0A0C4DH68 120 aa9.19□□□□□ -0.94
CDC42EP4-208ENST00000582303 HIGD2BQ4VC39 106 aa9.19□□□□□ -0.94
CDC42EP4-208ENST00000582303 STPG4Q8N801 248 aa9.19□□□□□ -0.94
CDC42EP4-208ENST00000582303 NUDT10Q8NFP7 164 aa9.19□□□□□ -0.94
CDC42EP4-208ENST00000582303 NUDT11Q96G61 164 aa9.19□□□□□ -0.94
CDC42EP4-208ENST00000582303 TMEM101Q96IK0 257 aa9.19□□□□□ -0.94
CDC42EP4-208ENST00000582303 RPP21Q9H633 154 aaKnown RBP9.19□□□□□ -0.94
CDC42EP4-208ENST00000582303 BCL2P10415 239 aa9.18□□□□□ -0.94
CDC42EP4-208ENST00000582303 GATD1Q8NB37 220 aa9.18□□□□□ -0.94
CDC42EP4-208ENST00000582303 LINC01600Q96MT4 127 aa9.18□□□□□ -0.94
CDC42EP4-208ENST00000582303 TRBV20OR9-2A0A075B6H5 130 aa9.17□□□□□ -0.94
CDC42EP4-208ENST00000582303 FGF6P10767 208 aa9.17□□□□□ -0.94
CDC42EP4-208ENST00000582303 PRR3P79522 188 aaKnown RBP9.17□□□□□ -0.94
CDC42EP4-208ENST00000582303 REG3GQ6UW15 175 aa9.17□□□□□ -0.94
CDC42EP4-208ENST00000582303 OR5A1Q8NGJ0 315 aa9.17□□□□□ -0.94
CDC42EP4-208ENST00000582303 PRSS3P2Q8NHM4 247 aa9.17□□□□□ -0.94
CDC42EP4-208ENST00000582303 TRAV26-2A0A0B4J265 109 aa9.16□□□□□ -0.94
CDC42EP4-208ENST00000582303 SDHAF1A6NFY7 115 aa9.16□□□□□ -0.94
CDC42EP4-208ENST00000582303 TNXBP22105 4242 aa9.16□□□□□ -0.94
CDC42EP4-208ENST00000582303 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.15□□□□□ -0.94
CDC42EP4-208ENST00000582303 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.94
CDC42EP4-208ENST00000582303 IGKV2-29A2NJV5 120 aaPredicted RBP9.15□□□□□ -0.94
CDC42EP4-208ENST00000582303 I3L3M4 83 aa9.15□□□□□ -0.94
CDC42EP4-208ENST00000582303 PMCHP20382 165 aa9.15□□□□□ -0.94
CDC42EP4-208ENST00000582303 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.94
CDC42EP4-208ENST00000582303 Q6ZNX1 250 aa9.15□□□□□ -0.94
CDC42EP4-208ENST00000582303 BORCS7Q96B45 105 aa9.15□□□□□ -0.94
CDC42EP4-208ENST00000582303 XCL1P47992 114 aa9.14□□□□□ -0.95
CDC42EP4-208ENST00000582303 LYPD6BQ8NI32 183 aa9.14□□□□□ -0.95
CDC42EP4-208ENST00000582303 MRAP2Q96G30 205 aa9.14□□□□□ -0.95
CDC42EP4-208ENST00000582303 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
CDC42EP4-208ENST00000582303 FOXI1Q12951 378 aa9.13□□□□□ -0.95
CDC42EP4-208ENST00000582303 SS18Q15532 418 aa9.13□□□□□ -0.95
CDC42EP4-208ENST00000582303 Q6ZRP5 223 aa9.13□□□□□ -0.95
CDC42EP4-208ENST00000582303 ISOC2Q96AB3 205 aa9.13□□□□□ -0.95
CDC42EP4-208ENST00000582303 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
CDC42EP4-208ENST00000582303 CARD19Q96LW7 228 aa9.13□□□□□ -0.95
CDC42EP4-208ENST00000582303 RNASE7Q9H1E1 156 aaKnown RBP9.13□□□□□ -0.95
CDC42EP4-208ENST00000582303 LRP2P98164 4655 aa9.13□□□□□ -0.95
CDC42EP4-208ENST00000582303 A0A096LNI7 61 aa9.12□□□□□ -0.95
CDC42EP4-208ENST00000582303 A0A0J9YXV3 536 aa9.12□□□□□ -0.95
CDC42EP4-208ENST00000582303 TRBV6-5A0A0K0K1A5 114 aa9.12□□□□□ -0.95
CDC42EP4-208ENST00000582303 A8MWL6 223 aa9.12□□□□□ -0.95
CDC42EP4-208ENST00000582303 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
CDC42EP4-208ENST00000582303 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
CDC42EP4-208ENST00000582303 CCL25O15444 150 aa9.11□□□□□ -0.95
CDC42EP4-208ENST00000582303 SLC51BQ86UW2 128 aa9.11□□□□□ -0.95
CDC42EP4-208ENST00000582303 OCC1Q8TAD7 63 aa9.11□□□□□ -0.95
CDC42EP4-208ENST00000582303 ST20Q9HBF5 79 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms