RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 TMEM262E9PQX1 116 aa13.59□□□□□ -0.23
TOP3A-213ENST00000582230 IGHV3-30P01768 117 aa13.59□□□□□ -0.23
TOP3A-213ENST00000582230 IGHV3-33P01772 117 aa13.59□□□□□ -0.23
TOP3A-213ENST00000582230 MT-ND6P03923 174 aa13.59□□□□□ -0.23
TOP3A-213ENST00000582230 IGHV3-30-3P0DP02 117 aa13.59□□□□□ -0.23
TOP3A-213ENST00000582230 IGHV3-30-5P0DP03 117 aa13.59□□□□□ -0.23
TOP3A-213ENST00000582230 C1orf134Q5TEV5 83 aa13.59□□□□□ -0.23
TOP3A-213ENST00000582230 SACSQ9NZJ4 4579 aa13.59□□□□□ -0.23
TOP3A-213ENST00000582230 TGIF2-C20orf24A0A0A6YYL0 155 aa13.58□□□□□ -0.24
TOP3A-213ENST00000582230 APCSP02743 223 aa13.58□□□□□ -0.24
TOP3A-213ENST00000582230 C6orf223Q8N319 242 aa13.58□□□□□ -0.24
TOP3A-213ENST00000582230 DEFB104AQ8WTQ1 72 aa13.58□□□□□ -0.24
TOP3A-213ENST00000582230 SMCO4Q9NRQ5 59 aa13.58□□□□□ -0.24
TOP3A-213ENST00000582230 RYR3Q15413 4870 aa13.57□□□□□ -0.24
TOP3A-213ENST00000582230 NPYP01303 97 aa13.57□□□□□ -0.24
TOP3A-213ENST00000582230 KIR2DL4Q99706 377 aa13.57□□□□□ -0.24
TOP3A-213ENST00000582230 IBA57-AS1B1ANH7 110 aa13.56□□□□□ -0.24
TOP3A-213ENST00000582230 TCAPO15273 167 aa13.56□□□□□ -0.24
TOP3A-213ENST00000582230 TSHBP01222 138 aa13.56□□□□□ -0.24
TOP3A-213ENST00000582230 UBE2L6O14933 153 aa13.55□□□□□ -0.24
TOP3A-213ENST00000582230 FCER1GP30273 86 aa13.55□□□□□ -0.24
TOP3A-213ENST00000582230 LAGE3Q14657 143 aa13.55□□□□□ -0.24
TOP3A-213ENST00000582230 Q8N3U1 123 aa13.55□□□□□ -0.24
TOP3A-213ENST00000582230 SMIM2Q9BVW6 85 aa13.55□□□□□ -0.24
TOP3A-213ENST00000582230 PRSS47A8MTI9 375 aa13.54□□□□□ -0.24
TOP3A-213ENST00000582230 H7C423 109 aa13.54□□□□□ -0.24
TOP3A-213ENST00000582230 GAGE6Q13070 117 aa13.54□□□□□ -0.24
TOP3A-213ENST00000582230 NFE4Q86UQ8 179 aa13.54□□□□□ -0.24
TOP3A-213ENST00000582230 YPEL4Q96NS1 127 aa13.54□□□□□ -0.24
TOP3A-213ENST00000582230 MPV17L2Q567V2 206 aa13.53□□□□□ -0.24
TOP3A-213ENST00000582230 CBLN2Q8IUK8 224 aa13.53□□□□□ -0.24
TOP3A-213ENST00000582230 MRPL18Q9H0U6 180 aaKnown RBP13.53□□□□□ -0.24
TOP3A-213ENST00000582230 MAP1LC3AQ9H492 121 aa13.53□□□□□ -0.24
TOP3A-213ENST00000582230 RYR2Q92736 4967 aa13.52□□□□□ -0.24
TOP3A-213ENST00000582230 A0A1B0GUV1 79 aa13.52□□□□□ -0.25
TOP3A-213ENST00000582230 ESDP10768 282 aa13.52□□□□□ -0.25
TOP3A-213ENST00000582230 RBX1P62877 108 aa13.52□□□□□ -0.25
TOP3A-213ENST00000582230 FABP9Q0Z7S8 132 aa13.52□□□□□ -0.25
TOP3A-213ENST00000582230 KIAA1644Q3SXP7 199 aa13.52□□□□□ -0.25
TOP3A-213ENST00000582230 KMT2AQ03164 3969 aa13.51□□□□□ -0.25
TOP3A-213ENST00000582230 RTL8CO15255 209 aa13.51□□□□□ -0.25
TOP3A-213ENST00000582230 LINC00336Q6ZUF6 198 aa13.51□□□□□ -0.25
TOP3A-213ENST00000582230 KLK12Q9UKR0 248 aa13.51□□□□□ -0.25
TOP3A-213ENST00000582230 TRAPPC1Q9Y5R8 145 aa13.51□□□□□ -0.25
TOP3A-213ENST00000582230 TRAV8-3A0A0A6YYJ7 113 aa13.5□□□□□ -0.25
TOP3A-213ENST00000582230 ANGP03950 147 aaKnown RBP13.5□□□□□ -0.25
TOP3A-213ENST00000582230 Q8N976 141 aa13.5□□□□□ -0.25
TOP3A-213ENST00000582230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-213ENST00000582230 IGKV2-29A2NJV5 120 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-213ENST00000582230 RAB5AP20339 215 aa13.49□□□□□ -0.25
TOP3A-213ENST00000582230 AMMECR1LQ6DCA0 310 aa13.49□□□□□ -0.25
TOP3A-213ENST00000582230 HYDINQ4G0P3 5121 aa13.48□□□□□ -0.25
TOP3A-213ENST00000582230 LOC389332A0A1B0GUA5 103 aa13.48□□□□□ -0.25
TOP3A-213ENST00000582230 Q0VG73 95 aa13.48□□□□□ -0.25
TOP3A-213ENST00000582230 TMEM18Q96B42 140 aa13.48□□□□□ -0.25
TOP3A-213ENST00000582230 ALKBH7Q9BT30 221 aaPredicted RBP13.48□□□□□ -0.25
TOP3A-213ENST00000582230 NXT2Q9NPJ8 142 aaKnown RBP13.48□□□□□ -0.25
TOP3A-213ENST00000582230 FGF6P10767 208 aa13.47□□□□□ -0.25
TOP3A-213ENST00000582230 ZNF25P17030 456 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-213ENST00000582230 SMAGPQ0VAQ4 97 aa13.47□□□□□ -0.25
TOP3A-213ENST00000582230 Q8N8P6 123 aa13.47□□□□□ -0.25
TOP3A-213ENST00000582230 K7EMI3 77 aa13.46□□□□□ -0.25
TOP3A-213ENST00000582230 UBE2WQ96B02 151 aa13.46□□□□□ -0.25
TOP3A-213ENST00000582230 Q9HAA7 133 aa13.46□□□□□ -0.25
TOP3A-213ENST00000582230 IGLV4-60A0A075B6I1 120 aa13.45□□□□□ -0.26
TOP3A-213ENST00000582230 CRPP02741 224 aa13.45□□□□□ -0.26
TOP3A-213ENST00000582230 RNASEKQ6P5S7 137 aaKnown RBP13.45□□□□□ -0.26
TOP3A-213ENST00000582230 Q6ZRN7 208 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-213ENST00000582230 MRPL52Q86TS9 123 aaKnown RBP13.45□□□□□ -0.26
TOP3A-213ENST00000582230 C20orf203Q8NBC4 194 aa13.45□□□□□ -0.26
TOP3A-213ENST00000582230 RMI2Q96E14 147 aa13.45□□□□□ -0.26
TOP3A-213ENST00000582230 TM2D2Q9BX73 214 aa13.45□□□□□ -0.26
TOP3A-213ENST00000582230 PRR34Q9NV39 138 aa13.45□□□□□ -0.26
TOP3A-213ENST00000582230 DNAH6Q9C0G6 4158 aa13.44□□□□□ -0.26
TOP3A-213ENST00000582230 PRSS29PA6NIE9 313 aa13.44□□□□□ -0.26
TOP3A-213ENST00000582230 ENHOQ6UWT2 76 aa13.44□□□□□ -0.26
TOP3A-213ENST00000582230 LINC00269Q8N2A0 174 aa13.44□□□□□ -0.26
TOP3A-213ENST00000582230 TMEM101Q96IK0 257 aa13.44□□□□□ -0.26
TOP3A-213ENST00000582230 COX11Q9Y6N1 276 aa13.44□□□□□ -0.26
TOP3A-213ENST00000582230 S100A1P23297 94 aa13.42□□□□□ -0.26
TOP3A-213ENST00000582230 IFI27P40305 119 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-213ENST00000582230 REG3AQ06141 175 aa13.42□□□□□ -0.26
TOP3A-213ENST00000582230 MIAQ16674 131 aa13.42□□□□□ -0.26
TOP3A-213ENST00000582230 ORMDL2Q53FV1 153 aa13.42□□□□□ -0.26
TOP3A-213ENST00000582230 OR5A1Q8NGJ0 315 aa13.42□□□□□ -0.26
TOP3A-213ENST00000582230 PRSS3P2Q8NHM4 247 aa13.42□□□□□ -0.26
TOP3A-213ENST00000582230 CSDC2Q9Y534 153 aaKnown RBP13.42□□□□□ -0.26
TOP3A-213ENST00000582230 PSCAO43653 123 aa13.41□□□□□ -0.26
TOP3A-213ENST00000582230 DGAT2L7PQ6IED9 249 aa13.41□□□□□ -0.26
TOP3A-213ENST00000582230 TIMM21Q9BVV7 248 aa13.41□□□□□ -0.26
TOP3A-213ENST00000582230 COLCA2A8K830 154 aa13.4□□□□□ -0.26
TOP3A-213ENST00000582230 UBE2D4Q9Y2X8 147 aa13.4□□□□□ -0.26
TOP3A-213ENST00000582230 SCO1O75880 301 aa13.39□□□□□ -0.27
TOP3A-213ENST00000582230 G0S2P27469 103 aa13.39□□□□□ -0.27
TOP3A-213ENST00000582230 TNP2Q05952 138 aa13.39□□□□□ -0.27
TOP3A-213ENST00000582230 C1orf43Q9BWL3 253 aa13.39□□□□□ -0.27
TOP3A-213ENST00000582230 IGKV2D-24A0A075B6R9 120 aa13.38□□□□□ -0.27
TOP3A-213ENST00000582230 TRAV8-4A0A0B4J246 113 aa13.38□□□□□ -0.27
TOP3A-213ENST00000582230 CLPSL2Q6UWE3 100 aa13.38□□□□□ -0.27
TOP3A-213ENST00000582230 CDC42SE2Q9NRR3 84 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms