RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 ZFP36P26651 326 aaKnown RBP10.21□□□□□ -0.78
ITGB4-207ENST00000580542 HIST1H4AP62805 103 aaKnown RBP10.21□□□□□ -0.78
ITGB4-207ENST00000580542 TINCRA0A1B0GVN0 87 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 SDHAF1A6NFY7 115 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 PLA2G2AP14555 144 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 SERP2Q8N6R1 65 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 IGHV3-35A0A0C4DH35 117 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 SDIM1Q6ZPB5 146 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 Q8N6K4 173 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 PHLDA3Q9Y5J5 127 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 PPP1R17O96001 155 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 TIMM17AQ99595 171 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 ZNF580Q9UK33 172 aa10.2□□□□□ -0.78
ITGB4-207ENST00000580542 RPL35AP18077 110 aaKnown RBP10.19□□□□□ -0.78
ITGB4-207ENST00000580542 PFN2P35080 140 aa10.19□□□□□ -0.78
ITGB4-207ENST00000580542 SIRPDQ9H106 197 aa10.19□□□□□ -0.78
ITGB4-207ENST00000580542 DAZ2Q13117 558 aaKnown RBP10.19□□□□□ -0.78
ITGB4-207ENST00000580542 DAZ4Q86SG3 579 aaKnown RBP10.19□□□□□ -0.78
ITGB4-207ENST00000580542 DAZ1Q9NQZ3 744 aaKnown RBP10.19□□□□□ -0.78
ITGB4-207ENST00000580542 DAZ3Q9NR90 486 aaKnown RBP10.19□□□□□ -0.78
ITGB4-207ENST00000580542 LINC00336Q6ZUF6 198 aa10.18□□□□□ -0.78
ITGB4-207ENST00000580542 USP9YO00507 2555 aaPredicted RBP10.18□□□□□ -0.78
ITGB4-207ENST00000580542 CELSR2Q9HCU4 2923 aa10.18□□□□□ -0.78
ITGB4-207ENST00000580542 VMO1Q7Z5L0 202 aa10.18□□□□□ -0.78
ITGB4-207ENST00000580542 OPRPNQ99935 248 aaPredicted RBP10.18□□□□□ -0.78
ITGB4-207ENST00000580542 IGHV7-81A0A0B4J1V7 117 aa10.17□□□□□ -0.78
ITGB4-207ENST00000580542 SYNJ2BPP57105 145 aa10.17□□□□□ -0.78
ITGB4-207ENST00000580542 DSCR9P59020 149 aa10.17□□□□□ -0.78
ITGB4-207ENST00000580542 GPHB5Q86YW7 130 aa10.17□□□□□ -0.78
ITGB4-207ENST00000580542 UPK3BQ9BT76 320 aa10.17□□□□□ -0.78
ITGB4-207ENST00000580542 ABCA2Q9BZC7 2435 aa10.17□□□□□ -0.78
ITGB4-207ENST00000580542 A0A0J9YX75 114 aa10.17□□□□□ -0.78
ITGB4-207ENST00000580542 ADAMTSL4-AS1Q5T5F5 129 aa10.17□□□□□ -0.78
ITGB4-207ENST00000580542 IGHV3-66A0A0C4DH42 116 aa10.16□□□□□ -0.78
ITGB4-207ENST00000580542 TIRAPP58753 221 aa10.16□□□□□ -0.78
ITGB4-207ENST00000580542 AKAP6Q13023 2319 aa10.16□□□□□ -0.78
ITGB4-207ENST00000580542 J3QKU1 62 aa10.15□□□□□ -0.78
ITGB4-207ENST00000580542 TMEM61Q8N0U2 210 aa10.15□□□□□ -0.78
ITGB4-207ENST00000580542 LITAFQ99732 161 aa10.15□□□□□ -0.78
ITGB4-207ENST00000580542 ZFAND3Q9H8U3 227 aa10.15□□□□□ -0.78
ITGB4-207ENST00000580542 NACAE9PAV3 2078 aa10.15□□□□□ -0.78
ITGB4-207ENST00000580542 IGKV3D-7A0A0C4DH55 119 aa10.15□□□□□ -0.78
ITGB4-207ENST00000580542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.15□□□□□ -0.78
ITGB4-207ENST00000580542 VCYO14598 125 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 IGHV3-30-3P0DP02 117 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 Q8N9W7 124 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 IGHV3OR16-13A0A075B7E8 117 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 IGHV3-74A0A0B4J1X5 117 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 IGHV4-61A0A0C4DH41 118 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 A0A0J9YXV3 536 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 BUB3O43684 328 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 SEC61GP60059 68 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 NBPF19A0A087WUL8 3843 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 CSMD2Q7Z408 3487 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 IGHV4-30-2A0A087WSY4 118 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 A0A096LNT2 108 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 BAALC-AS2P0C853 105 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 MIAQ16674 131 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 C15orf32Q32M92 178 aa10.14□□□□□ -0.79
ITGB4-207ENST00000580542 A0A087WVE0 104 aa10.13□□□□□ -0.79
ITGB4-207ENST00000580542 CLPSL1A2RUU4 121 aa10.13□□□□□ -0.79
ITGB4-207ENST00000580542 MINOS1Q5TGZ0 78 aa10.13□□□□□ -0.79
ITGB4-207ENST00000580542 MINOS1-NBL1R4GNA1 71 aa10.13□□□□□ -0.79
ITGB4-207ENST00000580542 CENPEQ02224 2701 aa10.13□□□□□ -0.79
ITGB4-207ENST00000580542 F5H697 171 aa10.13□□□□□ -0.79
ITGB4-207ENST00000580542 ZNF415Q09FC8 603 aa10.13□□□□□ -0.79
ITGB4-207ENST00000580542 PRR9Q5T870 116 aa10.13□□□□□ -0.79
ITGB4-207ENST00000580542 DAND5Q8N907 189 aa10.13□□□□□ -0.79
ITGB4-207ENST00000580542 FAM110DQ8TAY7 271 aaPredicted RBP10.13□□□□□ -0.79
ITGB4-207ENST00000580542 INAFM2P0DMQ5 153 aa10.12□□□□□ -0.79
ITGB4-207ENST00000580542 ECSCRQ19T08 205 aa10.12□□□□□ -0.79
ITGB4-207ENST00000580542 WNK2Q9Y3S1 2297 aa10.12□□□□□ -0.79
ITGB4-207ENST00000580542 MED13LQ71F56 2210 aa10.12□□□□□ -0.79
ITGB4-207ENST00000580542 USP17L23D6RBM5 183 aa10.11□□□□□ -0.79
ITGB4-207ENST00000580542 EDN2P20800 178 aa10.11□□□□□ -0.79
ITGB4-207ENST00000580542 POLR2KP53803 58 aaKnown RBP10.11□□□□□ -0.79
ITGB4-207ENST00000580542 CCDC140Q96MF4 163 aa10.11□□□□□ -0.79
ITGB4-207ENST00000580542 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
ITGB4-207ENST00000580542 PRRC2AP48634 2157 aaKnown RBP10.11□□□□□ -0.79
ITGB4-207ENST00000580542 KRTAP10-9P60411 292 aa10.11□□□□□ -0.79
ITGB4-207ENST00000580542 FHL2Q14192 279 aa10.11□□□□□ -0.79
ITGB4-207ENST00000580542 APCP25054 2843 aa10.11□□□□□ -0.79
ITGB4-207ENST00000580542 ATP6V0E1O15342 81 aa10.1□□□□□ -0.79
ITGB4-207ENST00000580542 IGF1P05019 195 aa10.1□□□□□ -0.79
ITGB4-207ENST00000580542 COX7A2LO14548 114 aa10.1□□□□□ -0.79
ITGB4-207ENST00000580542 ANKRD17O75179 2603 aaKnown RBP10.1□□□□□ -0.79
ITGB4-207ENST00000580542 IGHV3-49A0A0A0MS15 119 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 KLK9Q2XQG4 91 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 CLEC19AQ6UXS0 136 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 KLK9Q9UKQ9 250 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 SPG11Q96JI7 2443 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 IGHV3OR16-10A0A075B7F0 116 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 DNAL4O96015 105 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 IGHV1-69P01742 117 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 SUMO4Q6EEV6 95 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 C9orf85Q96MD7 179 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 V9GYY9 64 aa10.09□□□□□ -0.79
ITGB4-207ENST00000580542 HELZ2Q9BYK8 2649 aaKnown RBP10.08□□□□□ -0.8
ITGB4-207ENST00000580542 G3V318 75 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms