RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 TRBV10-1A0A0K0K1A3 114 aa10.51□□□□□ -0.73
CDK5RAP3-218ENST00000580391 IGLC3P0DOY3 106 aa10.51□□□□□ -0.73
CDK5RAP3-218ENST00000580391 SAMD5Q5TGI4 173 aa10.51□□□□□ -0.73
CDK5RAP3-218ENST00000580391 ZMAT4Q9H898 229 aa10.51□□□□□ -0.73
CDK5RAP3-218ENST00000580391 MRPL35Q9NZE8 188 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-218ENST00000580391 TRBV7-3A0A075B6L6 115 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 A0A087WX48 190 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 LOC100131303A0A0U1RQF7 123 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 GAGE12JA6NER3 117 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 RPL36AP83881 106 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 GAGE1Q13065 139 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 GAGE4Q13068 117 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 GAGE5Q13069 117 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 FHL2Q14192 279 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 GAGE13Q4V321 117 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 RPL36ALQ969Q0 106 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 HSBP1L1C9JCN9 74 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 C14orf144Q96I85 54 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 TIMM17AQ99595 171 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 TP73-AS1Q9UF72 201 aa10.5□□□□□ -0.73
CDK5RAP3-218ENST00000580391 TRAV12-1A0A0B4J245 112 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 TRBV6-4A0A1B0GX49 114 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 A8MZ25 164 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 CIDEAO60543 219 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 MIFP14174 115 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 COTL1Q14019 142 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 ZC2HC1BQ5TFG8 222 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 MDFIQ99750 246 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 RETNQ9HD89 108 aa10.49□□□□□ -0.73
CDK5RAP3-218ENST00000580391 LYRM9A8MSI8 78 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 DPM2O94777 84 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 IGKCP01834 107 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 TCTAP57738 103 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 STPG4Q8N801 248 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 MIEN1Q9BRT3 115 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 CELA1Q9UNI1 258 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 NBEAL1Q6ZS30 2694 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 UBE2D3P61077 147 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 UBE2D2P62837 147 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 OPRPNQ99935 248 aaPredicted RBP10.48□□□□□ -0.73
CDK5RAP3-218ENST00000580391 F8VRH5 84 aa10.47□□□□□ -0.73
CDK5RAP3-218ENST00000580391 CHTOPQ9Y3Y2 248 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-218ENST00000580391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-218ENST00000580391 IGKV2-29A2NJV5 120 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-218ENST00000580391 PRSS29PA6NIE9 313 aa10.46□□□□□ -0.73
CDK5RAP3-218ENST00000580391 UQCR10Q9UDW1 63 aa10.46□□□□□ -0.73
CDK5RAP3-218ENST00000580391 PRB2P02812 416 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-218ENST00000580391 CEMP1Q6PRD7 247 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-218ENST00000580391 DAZ4Q86SG3 579 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-218ENST00000580391 DAZ3Q9NR90 486 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-218ENST00000580391 HHLA3Q9XRX5 114 aa10.45□□□□□ -0.74
CDK5RAP3-218ENST00000580391 IGLV4-3A0A075B6K6 122 aa10.45□□□□□ -0.74
CDK5RAP3-218ENST00000580391 DEFA6Q01524 100 aa10.45□□□□□ -0.74
CDK5RAP3-218ENST00000580391 NTM-AS1Q6ZSK4 140 aa10.45□□□□□ -0.74
CDK5RAP3-218ENST00000580391 PRADC1Q9BSG0 188 aa10.45□□□□□ -0.74
CDK5RAP3-218ENST00000580391 PLNP26678 52 aa10.44□□□□□ -0.74
CDK5RAP3-218ENST00000580391 PMVKQ15126 192 aa10.44□□□□□ -0.74
CDK5RAP3-218ENST00000580391 FAM104AQ969W3 186 aa10.44□□□□□ -0.74
CDK5RAP3-218ENST00000580391 TENM3Q9P273 2699 aa10.44□□□□□ -0.74
CDK5RAP3-218ENST00000580391 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
CDK5RAP3-218ENST00000580391 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
CDK5RAP3-218ENST00000580391 DAD1P61803 113 aa10.43□□□□□ -0.74
CDK5RAP3-218ENST00000580391 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
CDK5RAP3-218ENST00000580391 UBE2D4Q9Y2X8 147 aa10.43□□□□□ -0.74
CDK5RAP3-218ENST00000580391 MGAM2Q2M2H8 2515 aa10.43□□□□□ -0.74
CDK5RAP3-218ENST00000580391 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
CDK5RAP3-218ENST00000580391 CRYBA4P53673 196 aa10.42□□□□□ -0.74
CDK5RAP3-218ENST00000580391 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 RNASE13Q5GAN3 156 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 IGKV2D-26A0A0A0MRZ7 120 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 C11orf86A6NJI1 115 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 COX8AP10176 69 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 GYPEP15421 78 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 NMUP48645 174 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 SLC25A34Q6PIV7 304 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 Q6ZUT4 128 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 SPANXA1Q9NS26 97 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 PRO0255Q9UI72 69 aa10.41□□□□□ -0.74
CDK5RAP3-218ENST00000580391 SBSPONQ8IVN8 264 aa10.4□□□□□ -0.74
CDK5RAP3-218ENST00000580391 FGF6P10767 208 aa10.39□□□□□ -0.75
CDK5RAP3-218ENST00000580391 ATP5G1P05496 136 aa10.39□□□□□ -0.75
CDK5RAP3-218ENST00000580391 PCP2Q8IVA1 136 aa10.39□□□□□ -0.75
CDK5RAP3-218ENST00000580391 AMELXQ99217 191 aa10.39□□□□□ -0.75
CDK5RAP3-218ENST00000580391 GTSF1LQ9H1H1 148 aa10.39□□□□□ -0.75
CDK5RAP3-218ENST00000580391 VCX2Q9H322 139 aa10.39□□□□□ -0.75
CDK5RAP3-218ENST00000580391 CBY1Q9Y3M2 126 aa10.39□□□□□ -0.75
CDK5RAP3-218ENST00000580391 A0A0J9YY99 117 aa10.38□□□□□ -0.75
CDK5RAP3-218ENST00000580391 K7EIL1 84 aa10.38□□□□□ -0.75
CDK5RAP3-218ENST00000580391 EREGO14944 169 aa10.38□□□□□ -0.75
CDK5RAP3-218ENST00000580391 TTTY13Q9BZ97 58 aa10.38□□□□□ -0.75
CDK5RAP3-218ENST00000580391 PAX4O43316 350 aa10.37□□□□□ -0.75
CDK5RAP3-218ENST00000580391 VSIG2Q96IQ7 327 aa10.37□□□□□ -0.75
CDK5RAP3-218ENST00000580391 HUWE1Q7Z6Z7 4374 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-218ENST00000580391 HTN3P15516 51 aa10.37□□□□□ -0.75
CDK5RAP3-218ENST00000580391 PAPPA-AS1Q5QFB9 102 aa10.37□□□□□ -0.75
CDK5RAP3-218ENST00000580391 TMEM243Q9BU79 118 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms