RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 TRIAP1O43715 76 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 IGHV4-38-2P0DP08 117 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 PROK1P58294 105 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 GAGE2BQ13066 116 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 SPINK13Q1W4C9 94 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 GAGE2EQ4V326 116 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 SFTA2Q6UW10 78 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 CITED1Q99966 193 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 LINC00467Q9BRT7 94 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 PPDPFQ9H3Y8 114 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 JPT2Q9H910 190 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 GAGE2DQ9UEU5 116 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 ICOSQ9Y6W8 199 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 DMDP11532 3685 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 WDFY4Q6ZS81 3184 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 HRNRQ86YZ3 2850 aaPredicted RBP3.87□□□□□ -1.79
CDH8-206ENST00000580044 IGHV3OR16-10A0A075B7F0 116 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 TRAV26-1A0A087WT03 109 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 A8MTW9 85 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 NDUFA1O15239 70 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 ACYP1P07311 99 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 TIRAPP58753 221 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 DEFB1P60022 68 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 BLCAPP62952 87 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 FHL3Q13643 280 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 VSIG2Q96IQ7 327 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 UBE2E2Q96LR5 201 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 SPXQ9BT56 116 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 PRORYQ9H606 182 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 NDUFA12Q9UI09 145 aa3.87□□□□□ -1.79
CDH8-206ENST00000580044 TPRP12270 2363 aaKnown RBP3.87□□□□□ -1.79
CDH8-206ENST00000580044 LOC400499M0QZD8 3231 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 KALRNO60229 2985 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 TRAV12-2A0A075B6T6 113 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 IGLV5-45A0A087WSX0 123 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 H7C2G1 150 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 ATP5J2P56134 94 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 HERVK_113P63121 156 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 GAGE5Q13069 117 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 GAGE6Q13070 117 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 TTC32Q5I0X7 151 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 C2orf82Q6UX34 121 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 LITAFQ99732 161 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 PEMTQ9UBM1 199 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 SPTBN2O15020 2390 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 MAP1BP46821 2468 aaKnown RBP3.86□□□□□ -1.79
CDH8-206ENST00000580044 ABCA4P78363 2273 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 WNK2Q9Y3S1 2297 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 CACNA1BQ00975 2339 aa3.86□□□□□ -1.79
CDH8-206ENST00000580044 LST1O00453 97 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 TGFAP01135 160 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 INSP01308 110 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 IGKV3-20P01619 116 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 IGHV3-53P01767 116 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 PRSS2P07478 247 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 HOXD3P31249 432 aaPredicted RBP3.85□□□□□ -1.79
CDH8-206ENST00000580044 NDUFV3P56181 108 aaKnown RBP3.85□□□□□ -1.79
CDH8-206ENST00000580044 DEFB121Q5J5C9 76 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 FAM19A3Q7Z5A8 133 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 TMEM61Q8N0U2 210 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 DUX5Q96PT3 197 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 DUX3Q96PT4 197 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 OPRPNQ99935 248 aaPredicted RBP3.85□□□□□ -1.79
CDH8-206ENST00000580044 CHCHD7Q9BUK0 85 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 KRTAP1-5Q9BYS1 174 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 VPREB3Q9UKI3 123 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 UBE2D4Q9Y2X8 147 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 CSDC2Q9Y534 153 aaKnown RBP3.85□□□□□ -1.79
CDH8-206ENST00000580044 ABCA2Q9BZC7 2435 aa3.85□□□□□ -1.79
CDH8-206ENST00000580044 PTPRQQ9UMZ3 2332 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 CFAP47Q6ZTR5 3102 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 TLN1Q9Y490 2541 aaKnown RBP3.84□□□□□ -1.79
CDH8-206ENST00000580044 IGHV3-64A0A075B6Q5 118 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 IGHV4-30-2A0A087WSY4 118 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 TRBV10-1A0A0K0K1A3 114 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 GAGE12JA6NER3 117 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 H7C423 109 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 C19orf84I3L1E1 186 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 GAGE7O76087 117 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 GAGE12FP0CL80 117 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 GAGE12GP0CL81 117 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 GAGE12IP0CL82 117 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 SYNJ2BPP57105 145 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 HERV-K104P63124 156 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 GAGE4Q13068 117 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 DGAT2L7PQ6IED9 249 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 OVOL2Q9BRP0 275 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 IMUPQ9GZP8 106 aa3.84□□□□□ -1.79
CDH8-206ENST00000580044 BOD1L1Q8NFC6 3051 aa3.84□□□□□ -1.8
CDH8-206ENST00000580044 MGAQ8IWI9 3026 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 ZFHX4Q86UP3 3567 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 TRBV7-7A0A0K0K1E9 115 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 TEX49A0A1B0GTD5 131 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 COX7A2LO14548 114 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 RS1O15537 224 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 IGHV4-59P01825 116 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 TRACP01848 142 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 ATP5G1P05496 136 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 DAZ2Q13117 558 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms