RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 LYZL1Q6UWQ5 148 aa8.91□□□□□ -0.98
GGA3-208ENST00000579743 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
GGA3-208ENST00000579743 PGLYRP4Q96LB8 373 aa8.91□□□□□ -0.98
GGA3-208ENST00000579743 PRSS1P07477 247 aa8.9□□□□□ -0.98
GGA3-208ENST00000579743 BCL2P10415 239 aa8.9□□□□□ -0.98
GGA3-208ENST00000579743 TWIST1Q15672 202 aa8.9□□□□□ -0.98
GGA3-208ENST00000579743 DPH3Q96FX2 82 aa8.9□□□□□ -0.98
GGA3-208ENST00000579743 OXTP01178 125 aa8.89□□□□□ -0.99
GGA3-208ENST00000579743 AMTP48728 403 aa8.89□□□□□ -0.99
GGA3-208ENST00000579743 RPL37AP61513 92 aaKnown RBP8.89□□□□□ -0.99
GGA3-208ENST00000579743 IGLV10-54A0A075B6I4 117 aa8.88□□□□□ -0.99
GGA3-208ENST00000579743 hDV102S1A0JD36 115 aa8.88□□□□□ -0.99
GGA3-208ENST00000579743 SERTAD4-AS1Q5TG53 156 aa8.88□□□□□ -0.99
GGA3-208ENST00000579743 CFAP161Q6P656 301 aa8.88□□□□□ -0.99
GGA3-208ENST00000579743 NUDT10Q8NFP7 164 aa8.88□□□□□ -0.99
GGA3-208ENST00000579743 NUDT11Q96G61 164 aa8.88□□□□□ -0.99
GGA3-208ENST00000579743 AMMECR1LQ6DCA0 310 aa8.87□□□□□ -0.99
GGA3-208ENST00000579743 RPP21Q9H633 154 aaKnown RBP8.87□□□□□ -0.99
GGA3-208ENST00000579743 FAT1Q14517 4588 aa8.87□□□□□ -0.99
GGA3-208ENST00000579743 IGHV3-64A0A075B6Q5 118 aa8.86□□□□□ -0.99
GGA3-208ENST00000579743 CTRLP40313 264 aa8.86□□□□□ -0.99
GGA3-208ENST00000579743 BLOC1S1P78537 153 aa8.86□□□□□ -0.99
GGA3-208ENST00000579743 UQCC3Q6UW78 93 aa8.86□□□□□ -0.99
GGA3-208ENST00000579743 C20orf203Q8NBC4 194 aa8.86□□□□□ -0.99
GGA3-208ENST00000579743 LYPD6BQ8NI32 183 aa8.86□□□□□ -0.99
GGA3-208ENST00000579743 TRBV20OR9-2A0A075B6H5 130 aa8.85□□□□□ -0.99
GGA3-208ENST00000579743 CNBPP62633 177 aaKnown RBP8.85□□□□□ -0.99
GGA3-208ENST00000579743 BORCS7Q96B45 105 aa8.85□□□□□ -0.99
GGA3-208ENST00000579743 IGLV4-60A0A075B6I1 120 aa8.84□□□□□ -0.99
GGA3-208ENST00000579743 H7C423 109 aa8.84□□□□□ -0.99
GGA3-208ENST00000579743 NCR2O95944 276 aa8.84□□□□□ -0.99
GGA3-208ENST00000579743 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
GGA3-208ENST00000579743 SDIM1Q6ZPB5 146 aa8.84□□□□□ -0.99
GGA3-208ENST00000579743 CNFNQ9BYD5 112 aa8.84□□□□□ -0.99
GGA3-208ENST00000579743 A8MWL6 223 aa8.83□□□□□ -1
GGA3-208ENST00000579743 OCC1Q8TAD7 63 aa8.83□□□□□ -1
GGA3-208ENST00000579743 RNF185Q96GF1 192 aa8.83□□□□□ -1
GGA3-208ENST00000579743 RNASE7Q9H1E1 156 aaKnown RBP8.83□□□□□ -1
GGA3-208ENST00000579743 TMEM250H0YL14 139 aa8.82□□□□□ -1
GGA3-208ENST00000579743 GATCO43716 136 aaKnown RBP8.82□□□□□ -1
GGA3-208ENST00000579743 APCSP02743 223 aa8.82□□□□□ -1
GGA3-208ENST00000579743 RNASEKQ6P5S7 137 aaKnown RBP8.82□□□□□ -1
GGA3-208ENST00000579743 GATD1Q8NB37 220 aa8.82□□□□□ -1
GGA3-208ENST00000579743 TMEM101Q96IK0 257 aa8.82□□□□□ -1
GGA3-208ENST00000579743 BTF3L4Q96K17 158 aa8.82□□□□□ -1
GGA3-208ENST00000579743 VPS13BQ7Z7G8 4022 aa8.82□□□□□ -1
GGA3-208ENST00000579743 HERC1Q15751 4861 aa8.81□□□□□ -1
GGA3-208ENST00000579743 IGKV3OR2-268A0A0C4DH90 116 aa8.81□□□□□ -1
GGA3-208ENST00000579743 PMCHP20382 165 aa8.81□□□□□ -1
GGA3-208ENST00000579743 PKIGQ9Y2B9 76 aa8.81□□□□□ -1
GGA3-208ENST00000579743 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
GGA3-208ENST00000579743 TRAV26-2A0A0B4J265 109 aa8.8□□□□□ -1
GGA3-208ENST00000579743 GAGE12HA6NDE8 117 aa8.8□□□□□ -1
GGA3-208ENST00000579743 KRTAP10-4P60372 401 aaPredicted RBP8.8□□□□□ -1
GGA3-208ENST00000579743 SDHAF1A6NFY7 115 aa8.79□□□□□ -1
GGA3-208ENST00000579743 K7EN84 100 aa8.79□□□□□ -1
GGA3-208ENST00000579743 ZNF25P17030 456 aaPredicted RBP8.79□□□□□ -1
GGA3-208ENST00000579743 ADCYAP1P18509 176 aa8.79□□□□□ -1
GGA3-208ENST00000579743 RPS10P46783 165 aaKnown RBP8.79□□□□□ -1
GGA3-208ENST00000579743 CEBPGP53567 150 aa8.79□□□□□ -1
GGA3-208ENST00000579743 SRSF3P84103 164 aaKnown RBP8.79□□□□□ -1
GGA3-208ENST00000579743 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
GGA3-208ENST00000579743 C7orf33Q8WU49 177 aa8.79□□□□□ -1
GGA3-208ENST00000579743 GFRA4Q9GZZ7 299 aa8.79□□□□□ -1
GGA3-208ENST00000579743 MYCBP2O75592 4640 aa8.79□□□□□ -1
GGA3-208ENST00000579743 TMEM218A2RU14 115 aa8.78□□□□□ -1
GGA3-208ENST00000579743 I3L3M4 83 aa8.78□□□□□ -1
GGA3-208ENST00000579743 CIRBPQ14011 172 aaKnown RBP8.78□□□□□ -1
GGA3-208ENST00000579743 CT83Q5H943 113 aa8.78□□□□□ -1
GGA3-208ENST00000579743 C10orf91Q5T1B1 145 aa8.78□□□□□ -1
GGA3-208ENST00000579743 CHCHD10Q8WYQ3 142 aaPredicted RBP8.78□□□□□ -1
GGA3-208ENST00000579743 EIF5A2Q9GZV4 153 aaKnown RBP8.78□□□□□ -1
GGA3-208ENST00000579743 CARHSP1Q9Y2V2 147 aaKnown RBP8.78□□□□□ -1
GGA3-208ENST00000579743 FGF6P10767 208 aa8.77□□□□□ -1.01
GGA3-208ENST00000579743 GTSF1Q8WW33 167 aa8.77□□□□□ -1.01
GGA3-208ENST00000579743 RPL39LQ96EH5 51 aaKnown RBP8.77□□□□□ -1.01
GGA3-208ENST00000579743 ST20Q9HBF5 79 aa8.77□□□□□ -1.01
GGA3-208ENST00000579743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.76□□□□□ -1.01
GGA3-208ENST00000579743 A0A087WYN8 130 aa8.76□□□□□ -1.01
GGA3-208ENST00000579743 A0A1B0GUT8 65 aa8.76□□□□□ -1.01
GGA3-208ENST00000579743 IGKV2-29A2NJV5 120 aaPredicted RBP8.76□□□□□ -1.01
GGA3-208ENST00000579743 NDUFS6O75380 124 aaKnown RBP8.76□□□□□ -1.01
GGA3-208ENST00000579743 SMAGPQ0VAQ4 97 aa8.76□□□□□ -1.01
GGA3-208ENST00000579743 Q6ZRU5 148 aa8.76□□□□□ -1.01
GGA3-208ENST00000579743 OR5A1Q8NGJ0 315 aa8.76□□□□□ -1.01
GGA3-208ENST00000579743 MRAP2Q96G30 205 aa8.76□□□□□ -1.01
GGA3-208ENST00000579743 TRBV6-5A0A0K0K1A5 114 aa8.75□□□□□ -1.01
GGA3-208ENST00000579743 C9JQL5 133 aa8.75□□□□□ -1.01
GGA3-208ENST00000579743 FOXA3P55318 350 aaPredicted RBP8.75□□□□□ -1.01
GGA3-208ENST00000579743 SS18Q15532 418 aa8.75□□□□□ -1.01
GGA3-208ENST00000579743 SPACA4Q8TDM5 124 aa8.75□□□□□ -1.01
GGA3-208ENST00000579743 SMIM7Q9BQ49 75 aa8.75□□□□□ -1.01
GGA3-208ENST00000579743 SEC11CQ9BY50 192 aa8.75□□□□□ -1.01
GGA3-208ENST00000579743 LINC00474Q9P2X8 69 aa8.75□□□□□ -1.01
GGA3-208ENST00000579743 PLA2G2DQ9UNK4 145 aa8.75□□□□□ -1.01
GGA3-208ENST00000579743 FAM231BA6NCW3 169 aa8.74□□□□□ -1.01
GGA3-208ENST00000579743 PANO1I0J062 215 aa8.74□□□□□ -1.01
GGA3-208ENST00000579743 SCO1O75880 301 aa8.74□□□□□ -1.01
GGA3-208ENST00000579743 PPP1R17O96001 155 aa8.74□□□□□ -1.01
GGA3-208ENST00000579743 COX6A2Q02221 97 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms