RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 KLF14Q8TD94 323 aaPredicted RBP4.29□□□□□ -1.72
COPS3-216ENST00000579716 NHSL1Q5SYE7 1610 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 DOCK11Q5JSL3 2073 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 IGLV3-16A0A075B6K0 115 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 IGKV1D-37A0A075B6S9 117 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 TRBV6-8A0A0A6YYG3 113 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 TRAV12-3A0A0B4J271 114 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 LOC101927531A0A1B0GV80 90 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 CFC1BP0CG36 223 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 SAA2P0DJI9 122 aaPredicted RBP4.28□□□□□ -1.72
COPS3-216ENST00000579716 CAV3P56539 151 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 Q6ZS52 159 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 ZNF563Q8TA94 476 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 LRP4O75096 1905 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 GREB1Q4ZG55 1949 aa4.28□□□□□ -1.72
COPS3-216ENST00000579716 PCNX3Q9H6A9 2034 aa4.28□□□□□ -1.73
COPS3-216ENST00000579716 LTBP1Q14766 1721 aa4.27□□□□□ -1.73
COPS3-216ENST00000579716 CXorf51AA0A1B0GTR3 108 aa4.27□□□□□ -1.73
COPS3-216ENST00000579716 Q6ZR03 302 aa4.27□□□□□ -1.73
COPS3-216ENST00000579716 C16orf74Q96GX8 76 aa4.27□□□□□ -1.73
COPS3-216ENST00000579716 LAMA4Q16363 1823 aa4.27□□□□□ -1.73
COPS3-216ENST00000579716 AGRNO00468 2067 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 LTBP4Q8N2S1 1624 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 TRAV10A0A0B4J240 114 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 IGHV1-18A0A0C4DH31 117 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 A8MUU9 505 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 IGLV2-11P01706 119 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 IGKV3-11P04433 115 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 ARMS2P0C7Q2 107 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 TMEM105Q8N8V8 129 aa4.26□□□□□ -1.73
COPS3-216ENST00000579716 MUC22E2RYF6 1773 aaPredicted RBP4.26□□□□□ -1.73
COPS3-216ENST00000579716 BRWD3Q6RI45 1802 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 KIAA1549LQ6ZVL6 1849 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 DLG5Q8TDM6 1919 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 TRBV30A0A0K0K1B3 111 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 C11orf86A6NJI1 115 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 D6R8Y8 96 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 PSCAO43653 123 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 IGLV1-44P01699 117 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 EIF4EBP1Q13541 118 aaPredicted RBP4.25□□□□□ -1.73
COPS3-216ENST00000579716 MUSTN1Q8IVN3 82 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 KLHL30-AS1Q8NEE0 82 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 C20orf166-AS1Q96NR2 134 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 DEFB126Q9BYW3 111 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 LCTP09848 1927 aa4.25□□□□□ -1.73
COPS3-216ENST00000579716 GBF1Q92538 1859 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 IGHV3-64DA0A0J9YX35 117 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 H3BQ85 93 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 IFI6P09912 130 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 P0C879 139 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 PLA2G2AP14555 144 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 ELOF1P60002 83 aaKnown RBP4.24□□□□□ -1.73
COPS3-216ENST00000579716 SERF2P84101 59 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.24□□□□□ -1.73
COPS3-216ENST00000579716 DOCK9Q9BZ29 2069 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 LY75O60449 1722 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 DDX60LQ5H9U9 1706 aaKnown RBP4.24□□□□□ -1.73
COPS3-216ENST00000579716 RICTORQ6R327 1708 aa4.24□□□□□ -1.73
COPS3-216ENST00000579716 NACAE9PAV3 2078 aa4.23□□□□□ -1.73
COPS3-216ENST00000579716 E9PCH4 1651 aa4.23□□□□□ -1.73
COPS3-216ENST00000579716 SHPRHQ149N8 1683 aa4.23□□□□□ -1.73
COPS3-216ENST00000579716 TET2Q6N021 2002 aaPredicted RBP4.23□□□□□ -1.73
COPS3-216ENST00000579716 PAPPA2Q9BXP8 1791 aa4.23□□□□□ -1.73
COPS3-216ENST00000579716 HIGD1CA8MV81 97 aa4.23□□□□□ -1.73
COPS3-216ENST00000579716 PLXNB1O43157 2135 aa4.23□□□□□ -1.73
COPS3-216ENST00000579716 SMIM29Q86T20 159 aa4.23□□□□□ -1.73
COPS3-216ENST00000579716 NDUFA4L2Q9NRX3 87 aa4.23□□□□□ -1.73
COPS3-216ENST00000579716 MYO16Q9Y6X6 1858 aa4.23□□□□□ -1.73
COPS3-216ENST00000579716 PARP4Q9UKK3 1724 aaKnown RBP4.23□□□□□ -1.73
COPS3-216ENST00000579716 PCNX2A6NKB5 2137 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 SLIT1O75093 1534 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 NINQ8N4C6 2090 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 TRBV10-1A0A0K0K1A3 114 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 H7C423 109 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 HMGN4O00479 90 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 LINC01565O15544 149 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 IGHV3-53P01767 116 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 TFF1P04155 84 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 MT3P25713 68 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 FCER1GP30273 86 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 S100A3P33764 101 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 Q1RN00 199 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 GDF5OSQ5U4N7 250 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 LENEPQ9Y5L5 61 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 SCN7AQ01118 1682 aa4.22□□□□□ -1.73
COPS3-216ENST00000579716 TRBV7-4A0A0J9YYF1 115 aa4.21□□□□□ -1.74
COPS3-216ENST00000579716 DNAL4O96015 105 aa4.21□□□□□ -1.74
COPS3-216ENST00000579716 IGHV3-33P01772 117 aa4.21□□□□□ -1.74
COPS3-216ENST00000579716 Q8N377 158 aa4.21□□□□□ -1.74
COPS3-216ENST00000579716 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
COPS3-216ENST00000579716 KIAA1549Q9HCM3 1950 aa4.21□□□□□ -1.74
COPS3-216ENST00000579716 TDRD6O60522 2096 aaKnown RBP4.21□□□□□ -1.74
COPS3-216ENST00000579716 LRP6O75581 1613 aa4.21□□□□□ -1.74
COPS3-216ENST00000579716 PANO1I0J062 215 aa4.2□□□□□ -1.74
COPS3-216ENST00000579716 CFC1P0CG37 223 aa4.2□□□□□ -1.74
COPS3-216ENST00000579716 FAM74A4Q5TZK3 123 aa4.2□□□□□ -1.74
COPS3-216ENST00000579716 Q8TAT8 98 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms