RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 NHP2Q9NX24 153 aaKnown RBP6.62□□□□□ -1.35
PCAT18-201ENST00000579458 HELZ2Q9BYK8 2649 aaKnown RBP6.61□□□□□ -1.35
PCAT18-201ENST00000579458 ESRGQ1W209 222 aa6.61□□□□□ -1.35
PCAT18-201ENST00000579458 PROK2Q9HC23 129 aa6.61□□□□□ -1.35
PCAT18-201ENST00000579458 SNRPGP15A8MWD9 76 aa6.61□□□□□ -1.35
PCAT18-201ENST00000579458 KLF9Q13886 244 aaPredicted RBP6.61□□□□□ -1.35
PCAT18-201ENST00000579458 BAGE3Q86Y29 109 aa6.61□□□□□ -1.35
PCAT18-201ENST00000579458 BAGE2Q86Y30 109 aa6.61□□□□□ -1.35
PCAT18-201ENST00000579458 ROMO1P60602 79 aa6.6□□□□□ -1.35
PCAT18-201ENST00000579458 TENM4Q6N022 2769 aa6.6□□□□□ -1.35
PCAT18-201ENST00000579458 A0A1B0GVX0 72 aa6.6□□□□□ -1.35
PCAT18-201ENST00000579458 K7ERS5 55 aa6.6□□□□□ -1.35
PCAT18-201ENST00000579458 LCE2BO14633 110 aa6.6□□□□□ -1.35
PCAT18-201ENST00000579458 TRAPPC1Q9Y5R8 145 aa6.6□□□□□ -1.35
PCAT18-201ENST00000579458 TMSB15BA0A087X1C1 80 aa6.59□□□□□ -1.35
PCAT18-201ENST00000579458 CPSF4O95639 269 aaKnown RBP6.59□□□□□ -1.35
PCAT18-201ENST00000579458 Q8NDZ9 215 aa6.59□□□□□ -1.35
PCAT18-201ENST00000579458 XAGE1AQ9HD64 81 aa6.59□□□□□ -1.35
PCAT18-201ENST00000579458 PCSK5Q92824 1860 aa6.59□□□□□ -1.36
PCAT18-201ENST00000579458 TLN1Q9Y490 2541 aaKnown RBP6.59□□□□□ -1.36
PCAT18-201ENST00000579458 ZNF22P17026 224 aaPredicted RBP6.59□□□□□ -1.36
PCAT18-201ENST00000579458 XCL1P47992 114 aa6.59□□□□□ -1.36
PCAT18-201ENST00000579458 SMCR5Q8TEV8 140 aa6.59□□□□□ -1.36
PCAT18-201ENST00000579458 DOCK11Q5JSL3 2073 aa6.58□□□□□ -1.36
PCAT18-201ENST00000579458 H3BMM0 161 aa6.58□□□□□ -1.36
PCAT18-201ENST00000579458 CRPP02741 224 aa6.58□□□□□ -1.36
PCAT18-201ENST00000579458 UBE2WQ96B02 151 aa6.58□□□□□ -1.36
PCAT18-201ENST00000579458 J3QKU1 62 aa6.58□□□□□ -1.36
PCAT18-201ENST00000579458 DEFB109BQ30KR1 87 aa6.58□□□□□ -1.36
PCAT18-201ENST00000579458 RPRMLQ8N4K4 120 aa6.58□□□□□ -1.36
PCAT18-201ENST00000579458 DYNLRB2Q8TF09 96 aa6.58□□□□□ -1.36
PCAT18-201ENST00000579458 SEC16AO15027 2179 aa6.57□□□□□ -1.36
PCAT18-201ENST00000579458 MIAQ16674 131 aa6.57□□□□□ -1.36
PCAT18-201ENST00000579458 HCG22E2RYF7 251 aa6.57□□□□□ -1.36
PCAT18-201ENST00000579458 LINC00643Q86TS7 51 aa6.57□□□□□ -1.36
PCAT18-201ENST00000579458 TMEM141Q96I45 108 aa6.57□□□□□ -1.36
PCAT18-201ENST00000579458 LINC01600Q96MT4 127 aa6.57□□□□□ -1.36
PCAT18-201ENST00000579458 SMIM7Q9BQ49 75 aa6.57□□□□□ -1.36
PCAT18-201ENST00000579458 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.57□□□□□ -1.36
PCAT18-201ENST00000579458 TRAV13-2A0A0B4J235 113 aa6.56□□□□□ -1.36
PCAT18-201ENST00000579458 IGHV3-66A0A0C4DH42 116 aa6.56□□□□□ -1.36
PCAT18-201ENST00000579458 DEFB110Q30KQ9 67 aa6.56□□□□□ -1.36
PCAT18-201ENST00000579458 A0A0B4J2C4 111 aa6.56□□□□□ -1.36
PCAT18-201ENST00000579458 FXYD1O00168 92 aa6.56□□□□□ -1.36
PCAT18-201ENST00000579458 SH2D1AO60880 128 aa6.56□□□□□ -1.36
PCAT18-201ENST00000579458 IGLV2-14P01704 120 aa6.56□□□□□ -1.36
PCAT18-201ENST00000579458 MYO18BQ8IUG5 2567 aa6.55□□□□□ -1.36
PCAT18-201ENST00000579458 ZNF627Q7L945 461 aa6.55□□□□□ -1.36
PCAT18-201ENST00000579458 C6orf201Q7Z4U5 140 aa6.55□□□□□ -1.36
PCAT18-201ENST00000579458 COL12A1Q99715 3063 aa6.55□□□□□ -1.36
PCAT18-201ENST00000579458 MDC1Q14676 2089 aaKnown RBP6.54□□□□□ -1.36
PCAT18-201ENST00000579458 PMS2P5A8MQ11 134 aa6.54□□□□□ -1.36
PCAT18-201ENST00000579458 SPTA1P02549 2419 aa6.54□□□□□ -1.36
PCAT18-201ENST00000579458 NINQ8N4C6 2090 aa6.54□□□□□ -1.36
PCAT18-201ENST00000579458 IQCF6A8MYZ5 107 aa6.54□□□□□ -1.36
PCAT18-201ENST00000579458 TCRBV4S1A1TA0A5B7 111 aa6.53□□□□□ -1.36
PCAT18-201ENST00000579458 ZNF791Q3KP31 576 aaPredicted RBP6.53□□□□□ -1.36
PCAT18-201ENST00000579458 SDIM1Q6ZPB5 146 aa6.53□□□□□ -1.36
PCAT18-201ENST00000579458 NBPF19A0A087WUL8 3843 aa6.53□□□□□ -1.36
PCAT18-201ENST00000579458 UBR5O95071 2799 aaPredicted RBP6.53□□□□□ -1.36
PCAT18-201ENST00000579458 ASH1LQ9NR48 2969 aaKnown RBP6.53□□□□□ -1.36
PCAT18-201ENST00000579458 FXYD2P54710 66 aa6.53□□□□□ -1.36
PCAT18-201ENST00000579458 TMEM170BQ5T4T1 132 aa6.53□□□□□ -1.36
PCAT18-201ENST00000579458 SPANXN1Q5VSR9 72 aa6.52□□□□□ -1.37
PCAT18-201ENST00000579458 C20orf197Q8N268 126 aa6.52□□□□□ -1.37
PCAT18-201ENST00000579458 Q96M85 177 aa6.52□□□□□ -1.37
PCAT18-201ENST00000579458 DOCK10Q96BY6 2186 aa6.52□□□□□ -1.37
PCAT18-201ENST00000579458 SETXQ7Z333 2677 aaKnown RBP6.52□□□□□ -1.37
PCAT18-201ENST00000579458 NTM-AS1Q6ZSK4 140 aa6.52□□□□□ -1.37
PCAT18-201ENST00000579458 CHCHD7Q9BUK0 85 aa6.52□□□□□ -1.37
PCAT18-201ENST00000579458 NPYP01303 97 aa6.51□□□□□ -1.37
PCAT18-201ENST00000579458 INSP01308 110 aa6.51□□□□□ -1.37
PCAT18-201ENST00000579458 FDCSPQ8NFU4 85 aa6.51□□□□□ -1.37
PCAT18-201ENST00000579458 NUP214P35658 2090 aaPredicted RBP6.51□□□□□ -1.37
PCAT18-201ENST00000579458 SHANK1Q9Y566 2161 aa6.51□□□□□ -1.37
PCAT18-201ENST00000579458 NBASA2RRP1 2371 aa6.51□□□□□ -1.37
PCAT18-201ENST00000579458 hDV103S1A0JD37 113 aa6.51□□□□□ -1.37
PCAT18-201ENST00000579458 C17orf98A8MV24 154 aa6.51□□□□□ -1.37
PCAT18-201ENST00000579458 GCHFRP30047 84 aa6.51□□□□□ -1.37
PCAT18-201ENST00000579458 CAMK2N1Q7Z7J9 78 aa6.51□□□□□ -1.37
PCAT18-201ENST00000579458 TEX49A0A1B0GTD5 131 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 FAM223BA6NKX1 122 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 CLPSP04118 112 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 IGHV1-8P0DP01 117 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 C9orf116Q5BN46 136 aaPredicted RBP6.5□□□□□ -1.37
PCAT18-201ENST00000579458 Q8N1X5 172 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 MPDZO75970 2070 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 IGHV3-73A0A0B4J1V6 119 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 H3BVH4 76 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 ACYP1P07311 99 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 Q6ZQT0 140 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 C15orf56Q8N910 161 aa6.5□□□□□ -1.37
PCAT18-201ENST00000579458 FLNCQ14315 2725 aa6.49□□□□□ -1.37
PCAT18-201ENST00000579458 IGLV1-50A0A075B6I6 118 aa6.49□□□□□ -1.37
PCAT18-201ENST00000579458 IGLV3-21P80748 117 aaPredicted RBP6.49□□□□□ -1.37
PCAT18-201ENST00000579458 FLNBO75369 2602 aaKnown RBP6.49□□□□□ -1.37
PCAT18-201ENST00000579458 ESPL1Q14674 2120 aa6.49□□□□□ -1.37
PCAT18-201ENST00000579458 IGKV1D-42A0A075B6H8 117 aa6.49□□□□□ -1.37
PCAT18-201ENST00000579458 A8MUU9 505 aa6.49□□□□□ -1.37
PCAT18-201ENST00000579458 NDUFC1O43677 76 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms