RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 TCAPO15273 167 aa4.43□□□□□ -1.7
UBB-208ENST00000578706 RNASE3P12724 160 aaKnown RBP4.43□□□□□ -1.7
UBB-208ENST00000578706 FCER1GP30273 86 aa4.43□□□□□ -1.7
UBB-208ENST00000578706 GAGE1Q13065 139 aa4.43□□□□□ -1.7
UBB-208ENST00000578706 MORN3Q6PF18 240 aaPredicted RBP4.43□□□□□ -1.7
UBB-208ENST00000578706 NRACQ8N912 160 aa4.43□□□□□ -1.7
UBB-208ENST00000578706 C20orf78Q9BR46 151 aa4.43□□□□□ -1.7
UBB-208ENST00000578706 TIMM8BQ9Y5J9 83 aaPredicted RBP4.43□□□□□ -1.7
UBB-208ENST00000578706 TRGV11A0A075B6L2 103 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 IGHV1OR15-1A0A075B7D0 117 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 TRAV12-3A0A0B4J271 114 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 IGHV3-16A0A0C4DH30 117 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 A0A1B0GV90 55 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 GNRH2O43555 120 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 EIF4EBP3O60516 100 aaPredicted RBP4.42□□□□□ -1.7
UBB-208ENST00000578706 SMIM17P0DL12 118 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 HLA-DRB4P13762 266 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 PCP4P48539 62 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 DEFB131AP59861 70 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 NUTF2P61970 127 aaKnown RBP4.42□□□□□ -1.7
UBB-208ENST00000578706 KIR3DS1Q14943 382 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 AMTNQ6UX39 209 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 ATOH7Q8N100 152 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 SYT8Q8NBV8 401 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 IFI27L1Q96BM0 104 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 C9orf85Q96MD7 179 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 SMIM2Q9BVW6 85 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 HLA-DRB4X5D2U9 266 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 X6R8D5 127 aa4.42□□□□□ -1.7
UBB-208ENST00000578706 FAT3Q8TDW7 4589 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 LINC01549A6NIU2 74 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 KRTAP29-1A8MX34 341 aaPredicted RBP4.41□□□□□ -1.7
UBB-208ENST00000578706 H3BMM0 161 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 ATP5LO75964 103 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 GIG44P09565 113 aaPredicted RBP4.41□□□□□ -1.7
UBB-208ENST00000578706 SPART-AS1P0CW21 52 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 GATA1P15976 413 aaPredicted RBP4.41□□□□□ -1.7
UBB-208ENST00000578706 HNRNPA3P51991 378 aaKnown RBP4.41□□□□□ -1.7
UBB-208ENST00000578706 RPL32P62910 135 aaKnown RBP4.41□□□□□ -1.7
UBB-208ENST00000578706 LAGE3Q14657 143 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 SPINK13Q1W4C9 94 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 ORMDL2Q53FV1 153 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 Q6ZN92 141 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 C6orf223Q8N319 242 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 C14orf178Q8N769 122 aaPredicted RBP4.41□□□□□ -1.7
UBB-208ENST00000578706 PMCHL2Q9BQD1 86 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 SNHG12Q9BXW3 62 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 CELA1Q9UNI1 258 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 MRPS16Q9Y3D3 137 aaKnown RBP4.41□□□□□ -1.7
UBB-208ENST00000578706 GOLT1BQ9Y3E0 138 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 KIF25-AS1Q9Y6Z4 181 aa4.41□□□□□ -1.7
UBB-208ENST00000578706 TRAV26-2A0A0B4J265 109 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 H0Y8G0 127 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 GAS8-AS1O95177 125 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 IGKV3-20P01619 116 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 MGPP08493 103 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 G0S2P27469 103 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 SUMO2P61956 95 aaKnown RBP4.4□□□□□ -1.71
UBB-208ENST00000578706 MAJINQ3KP22 176 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 TRPT1Q86TN4 253 aaKnown RBP4.4□□□□□ -1.71
UBB-208ENST00000578706 CSNK1G2-AS1Q8NCQ2 148 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 RASL10AQ92737 203 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 LINC00467Q9BRT7 94 aa4.4□□□□□ -1.71
UBB-208ENST00000578706 TRAV12-2A0A075B6T6 113 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 TRBV6-5A0A0K0K1A5 114 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 NBDYA0A0U1RRE5 68 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 hDV102S1A0JD36 115 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 KNCNA6PVL3 124 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 SMR3BP02814 79 aaPredicted RBP4.39□□□□□ -1.71
UBB-208ENST00000578706 EMP1P54849 157 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 LINC00315P59091 139 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 SLC25A34Q6PIV7 304 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 PTH2Q96A98 100 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 C1QTNF4Q9BXJ3 329 aa4.39□□□□□ -1.71
UBB-208ENST00000578706 CHTOPQ9Y3Y2 248 aaKnown RBP4.39□□□□□ -1.71
UBB-208ENST00000578706 CBY3A6NI87 242 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.38□□□□□ -1.71
UBB-208ENST00000578706 NUDT3O95989 172 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 INSP01308 110 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 PRSS1P07477 247 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 COX8AP10176 69 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 HTN3P15516 51 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 FUSP35637 526 aaKnown RBP eCLIP4.38□□□□□ -1.71
UBB-208ENST00000578706 FXYD7P58549 80 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 ZNF415Q09FC8 603 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 COL5A1-AS1Q5SY13 56 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 SUMO4Q6EEV6 95 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 TOMM6Q96B49 74 aa4.38□□□□□ -1.71
UBB-208ENST00000578706 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 TEX48A0A1B0GUV7 120 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 SMIM9A6NGZ8 99 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 F5H697 171 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 H7C1H1 209 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 VCYO14598 125 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 DPM2O94777 84 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 PLNP26678 52 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 ODF1Q14990 250 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 ZNF876PQ49A33 203 aa4.37□□□□□ -1.71
UBB-208ENST00000578706 RPL39LQ96EH5 51 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms