RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 A0A0J9YXV3 536 aa12.76□□□□□ -0.37
ERBB2-205ENST00000578199 ZNF479Q96JC4 524 aa12.76□□□□□ -0.37
ERBB2-205ENST00000578199 JMJD1CQ15652 2540 aa12.75□□□□□ -0.37
ERBB2-205ENST00000578199 IGHV3-38A0A0C4DH36 116 aa12.75□□□□□ -0.37
ERBB2-205ENST00000578199 A8MWV9 139 aa12.75□□□□□ -0.37
ERBB2-205ENST00000578199 A0A1B0GV72 72 aa12.74□□□□□ -0.37
ERBB2-205ENST00000578199 KRTAP1-1Q07627 177 aa12.74□□□□□ -0.37
ERBB2-205ENST00000578199 FAM104AQ969W3 186 aa12.74□□□□□ -0.37
ERBB2-205ENST00000578199 VCX2Q9H322 139 aa12.74□□□□□ -0.37
ERBB2-205ENST00000578199 YAE1D1Q9NRH1 226 aa12.74□□□□□ -0.37
ERBB2-205ENST00000578199 HELZ2Q9BYK8 2649 aaKnown RBP12.74□□□□□ -0.37
ERBB2-205ENST00000578199 A0A0J9YY99 117 aa12.73□□□□□ -0.37
ERBB2-205ENST00000578199 INSP01308 110 aa12.73□□□□□ -0.37
ERBB2-205ENST00000578199 OR5A1Q8NGJ0 315 aa12.73□□□□□ -0.37
ERBB2-205ENST00000578199 J3QQQ9 107 aa12.72□□□□□ -0.37
ERBB2-205ENST00000578199 STHQ8IWL8 128 aa12.72□□□□□ -0.37
ERBB2-205ENST00000578199 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
ERBB2-205ENST00000578199 FHL3Q13643 280 aa12.72□□□□□ -0.37
ERBB2-205ENST00000578199 SFTA2Q6UW10 78 aa12.72□□□□□ -0.37
ERBB2-205ENST00000578199 NFE4Q86UQ8 179 aa12.72□□□□□ -0.37
ERBB2-205ENST00000578199 SMAGPQ0VAQ4 97 aa12.71□□□□□ -0.37
ERBB2-205ENST00000578199 LINC01006Q8NI28 216 aa12.71□□□□□ -0.37
ERBB2-205ENST00000578199 AMELXQ99217 191 aa12.71□□□□□ -0.37
ERBB2-205ENST00000578199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.71□□□□□ -0.37
ERBB2-205ENST00000578199 TMEM223A0PJW6 202 aa12.71□□□□□ -0.37
ERBB2-205ENST00000578199 IGKV2-29A2NJV5 120 aaPredicted RBP12.71□□□□□ -0.37
ERBB2-205ENST00000578199 ZNF22P17026 224 aaPredicted RBP12.71□□□□□ -0.37
ERBB2-205ENST00000578199 C1orf158Q8N1D5 194 aa12.71□□□□□ -0.37
ERBB2-205ENST00000578199 A0A1B0GWB2 263 aa12.7□□□□□ -0.38
ERBB2-205ENST00000578199 H3BMG7 143 aa12.7□□□□□ -0.38
ERBB2-205ENST00000578199 MTURNQ8N3F0 131 aa12.7□□□□□ -0.38
ERBB2-205ENST00000578199 SIGMAR1Q99720 223 aa12.7□□□□□ -0.38
ERBB2-205ENST00000578199 RHODO00212 210 aa12.7□□□□□ -0.38
ERBB2-205ENST00000578199 APOMO95445 188 aa12.7□□□□□ -0.38
ERBB2-205ENST00000578199 RRN3P1Q2M238 152 aa12.7□□□□□ -0.38
ERBB2-205ENST00000578199 EDA2RQ9HAV5 297 aa12.7□□□□□ -0.38
ERBB2-205ENST00000578199 LGALS3P17931 250 aaKnown RBP12.69□□□□□ -0.38
ERBB2-205ENST00000578199 SPXQ9BT56 116 aa12.69□□□□□ -0.38
ERBB2-205ENST00000578199 PGPEP1Q9NXJ5 209 aa12.69□□□□□ -0.38
ERBB2-205ENST00000578199 CHCHD7Q9BUK0 85 aa12.69□□□□□ -0.38
ERBB2-205ENST00000578199 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
ERBB2-205ENST00000578199 TEX48A0A1B0GUV7 120 aa12.68□□□□□ -0.38
ERBB2-205ENST00000578199 TRGV1A0A0A0MS02 117 aa12.67□□□□□ -0.38
ERBB2-205ENST00000578199 IGHV3-53P01767 116 aa12.67□□□□□ -0.38
ERBB2-205ENST00000578199 RPL24P83731 157 aaKnown RBP12.67□□□□□ -0.38
ERBB2-205ENST00000578199 SLC25A29Q8N8R3 303 aa12.67□□□□□ -0.38
ERBB2-205ENST00000578199 LINC00467Q9BRT7 94 aa12.67□□□□□ -0.38
ERBB2-205ENST00000578199 ADARB2-AS1A8MUL3 147 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 BEAN1Q3B7T3 259 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 TEX29Q8N6K0 151 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 UNC79Q9P2D8 2635 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 LEPROTO15243 131 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 IGHV3-30P01768 117 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 IGHV3-30-5P0DP03 117 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 UBE2D1P51668 147 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 WFDC2Q14508 124 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 SMR3AQ99954 134 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 PYGO1Q9Y3Y4 419 aa12.66□□□□□ -0.38
ERBB2-205ENST00000578199 TSSC4Q9Y5U2 329 aaPredicted RBP12.66□□□□□ -0.38
ERBB2-205ENST00000578199 TRAV8-3A0A0A6YYJ7 113 aa12.65□□□□□ -0.38
ERBB2-205ENST00000578199 TRAV25A0A0B4J276 109 aa12.65□□□□□ -0.38
ERBB2-205ENST00000578199 RS1O15537 224 aa12.65□□□□□ -0.38
ERBB2-205ENST00000578199 PIK3CD-AS1Q5SR53 167 aa12.65□□□□□ -0.38
ERBB2-205ENST00000578199 UBE2D4Q9Y2X8 147 aa12.65□□□□□ -0.38
ERBB2-205ENST00000578199 A6NJY4 79 aa12.64□□□□□ -0.39
ERBB2-205ENST00000578199 FASNP49327 2511 aaKnown RBP12.64□□□□□ -0.39
ERBB2-205ENST00000578199 A8MZ25 164 aa12.64□□□□□ -0.39
ERBB2-205ENST00000578199 Q6ZTI0 123 aa12.64□□□□□ -0.39
ERBB2-205ENST00000578199 PTH2Q96A98 100 aa12.64□□□□□ -0.39
ERBB2-205ENST00000578199 TSPAN13O95857 204 aa12.63□□□□□ -0.39
ERBB2-205ENST00000578199 PLA2G2AP14555 144 aa12.63□□□□□ -0.39
ERBB2-205ENST00000578199 Q6ZUT4 128 aa12.63□□□□□ -0.39
ERBB2-205ENST00000578199 CFC1BP0CG36 223 aa12.63□□□□□ -0.39
ERBB2-205ENST00000578199 CFC1P0CG37 223 aa12.63□□□□□ -0.39
ERBB2-205ENST00000578199 GAGE12HA6NDE8 117 aa12.62□□□□□ -0.39
ERBB2-205ENST00000578199 RNASE1P07998 156 aaKnown RBP12.62□□□□□ -0.39
ERBB2-205ENST00000578199 IGHV3-30-3P0DP02 117 aa12.62□□□□□ -0.39
ERBB2-205ENST00000578199 NDUFA11Q86Y39 141 aa12.62□□□□□ -0.39
ERBB2-205ENST00000578199 C10orf126Q8N4M7 172 aa12.62□□□□□ -0.39
ERBB2-205ENST00000578199 SPANXB1Q9NS25 103 aaPredicted RBP12.62□□□□□ -0.39
ERBB2-205ENST00000578199 TRAV26-1A0A087WT03 109 aa12.62□□□□□ -0.39
ERBB2-205ENST00000578199 LOC107984156A0A0G2JMH3 177 aa12.62□□□□□ -0.39
ERBB2-205ENST00000578199 RPL35AP18077 110 aaKnown RBP12.62□□□□□ -0.39
ERBB2-205ENST00000578199 MRPS36P82909 103 aaKnown RBP12.62□□□□□ -0.39
ERBB2-205ENST00000578199 C2CD3Q4AC94 2353 aa12.62□□□□□ -0.39
ERBB2-205ENST00000578199 ARL17AQ8IVW1 177 aa12.62□□□□□ -0.39
ERBB2-205ENST00000578199 CKS1BP61024 79 aa12.61□□□□□ -0.39
ERBB2-205ENST00000578199 GIG44P09565 113 aaPredicted RBP12.61□□□□□ -0.39
ERBB2-205ENST00000578199 SH2D6Q7Z4S9 175 aa12.61□□□□□ -0.39
ERBB2-205ENST00000578199 CRYBA4P53673 196 aa12.6□□□□□ -0.39
ERBB2-205ENST00000578199 TIMM21Q9BVV7 248 aa12.6□□□□□ -0.39
ERBB2-205ENST00000578199 NOP10Q9NPE3 64 aaKnown RBP12.6□□□□□ -0.39
ERBB2-205ENST00000578199 J3QKU1 62 aa12.6□□□□□ -0.39
ERBB2-205ENST00000578199 IL17DQ8TAD2 202 aa12.6□□□□□ -0.39
ERBB2-205ENST00000578199 KMT2BQ9UMN6 2715 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-205ENST00000578199 SPINK8P0C7L1 97 aa12.59□□□□□ -0.39
ERBB2-205ENST00000578199 DNAJC30Q96LL9 226 aa12.59□□□□□ -0.39
ERBB2-205ENST00000578199 C16orf95Q9H693 158 aa12.59□□□□□ -0.39
ERBB2-205ENST00000578199 SPATA25Q9BR10 227 aa12.59□□□□□ -0.39
ERBB2-205ENST00000578199 A4D1N5 150 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms