RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 A0A1B0GXF2 115 aa12.82□□□□□ -0.36
SS18-208ENST00000577751 TMEM218A2RU14 115 aa12.82□□□□□ -0.36
SS18-208ENST00000577751 ADCYAP1P18509 176 aa12.82□□□□□ -0.36
SS18-208ENST00000577751 AMTP48728 403 aa12.82□□□□□ -0.36
SS18-208ENST00000577751 CAMPP49913 170 aa12.82□□□□□ -0.36
SS18-208ENST00000577751 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
SS18-208ENST00000577751 CDPF1Q6NVV7 123 aa12.82□□□□□ -0.36
SS18-208ENST00000577751 ANAPC16Q96DE5 110 aa12.82□□□□□ -0.36
SS18-208ENST00000577751 PRR34Q9NV39 138 aa12.82□□□□□ -0.36
SS18-208ENST00000577751 MT-ND4LP03901 98 aa12.81□□□□□ -0.36
SS18-208ENST00000577751 POLR2KP53803 58 aaKnown RBP12.81□□□□□ -0.36
SS18-208ENST00000577751 TMEM70Q9BUB7 260 aa12.81□□□□□ -0.36
SS18-208ENST00000577751 ST20Q9HBF5 79 aa12.81□□□□□ -0.36
SS18-208ENST00000577751 IGKV2D-24A0A075B6R9 120 aa12.8□□□□□ -0.36
SS18-208ENST00000577751 I3L3M4 83 aa12.8□□□□□ -0.36
SS18-208ENST00000577751 FUSP35637 526 aaKnown RBP eCLIP12.8□□□□□ -0.36
SS18-208ENST00000577751 HBBP68871 147 aa12.8□□□□□ -0.36
SS18-208ENST00000577751 MRPL51Q4U2R6 128 aaKnown RBP12.8□□□□□ -0.36
SS18-208ENST00000577751 MRPL54Q6P161 138 aaKnown RBP12.8□□□□□ -0.36
SS18-208ENST00000577751 NRACQ8N912 160 aa12.8□□□□□ -0.36
SS18-208ENST00000577751 DNAH5Q8TE73 4624 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 KIAA1109Q2LD37 5005 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 SMKR1H3BMG3 65 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 PPP1R17O96001 155 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 CRPP02741 224 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 S100A8P05109 93 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 PMCHP20382 165 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 WFDC2Q14508 124 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 MIAQ16674 131 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 ATP5L2Q7Z4Y8 100 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 Q8N814 137 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 C20orf203Q8NBC4 194 aa12.79□□□□□ -0.36
SS18-208ENST00000577751 LRP1BQ9NZR2 4599 aa12.78□□□□□ -0.36
SS18-208ENST00000577751 IGLV4-60A0A075B6I1 120 aa12.78□□□□□ -0.36
SS18-208ENST00000577751 TRBV27A0A0K0K1C4 114 aa12.78□□□□□ -0.36
SS18-208ENST00000577751 LINC00862A6NCI5 91 aa12.78□□□□□ -0.36
SS18-208ENST00000577751 UBE2L6O14933 153 aa12.78□□□□□ -0.36
SS18-208ENST00000577751 LINC00269Q8N2A0 174 aa12.78□□□□□ -0.36
SS18-208ENST00000577751 F8W036 122 aa12.77□□□□□ -0.37
SS18-208ENST00000577751 H7C423 109 aa12.77□□□□□ -0.37
SS18-208ENST00000577751 APCSP02743 223 aa12.77□□□□□ -0.37
SS18-208ENST00000577751 COMMD7Q86VX2 200 aa12.77□□□□□ -0.37
SS18-208ENST00000577751 C1orf43Q9BWL3 253 aa12.77□□□□□ -0.37
SS18-208ENST00000577751 SEC11CQ9BY50 192 aa12.77□□□□□ -0.37
SS18-208ENST00000577751 TSHBP01222 138 aa12.76□□□□□ -0.37
SS18-208ENST00000577751 ESDP10768 282 aa12.76□□□□□ -0.37
SS18-208ENST00000577751 NTN5Q8WTR8 489 aaPredicted RBP12.76□□□□□ -0.37
SS18-208ENST00000577751 BAALCQ8WXS3 180 aa12.76□□□□□ -0.37
SS18-208ENST00000577751 TRBV24-1A0A075B6N3 115 aa12.75□□□□□ -0.37
SS18-208ENST00000577751 CDK2AP2O75956 126 aa12.75□□□□□ -0.37
SS18-208ENST00000577751 SUMO2P61956 95 aaKnown RBP12.75□□□□□ -0.37
SS18-208ENST00000577751 REG3AQ06141 175 aa12.75□□□□□ -0.37
SS18-208ENST00000577751 VCYO14598 125 aa12.74□□□□□ -0.37
SS18-208ENST00000577751 LECT2O14960 151 aa12.74□□□□□ -0.37
SS18-208ENST00000577751 KRTAP26-1Q6PEX3 210 aa12.74□□□□□ -0.37
SS18-208ENST00000577751 CLPSL2Q6UWE3 100 aa12.74□□□□□ -0.37
SS18-208ENST00000577751 TMEM242Q9NWH2 141 aa12.74□□□□□ -0.37
SS18-208ENST00000577751 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.73□□□□□ -0.37
SS18-208ENST00000577751 IGKV2-29A2NJV5 120 aaPredicted RBP12.73□□□□□ -0.37
SS18-208ENST00000577751 CKS2P33552 79 aa12.73□□□□□ -0.37
SS18-208ENST00000577751 C20orf78Q9BR46 151 aa12.73□□□□□ -0.37
SS18-208ENST00000577751 HERC2O95714 4834 aa12.73□□□□□ -0.37
SS18-208ENST00000577751 C10orf91Q5T1B1 145 aa12.72□□□□□ -0.37
SS18-208ENST00000577751 IMMP2LQ96T52 175 aa12.72□□□□□ -0.37
SS18-208ENST00000577751 IGLV5-52A0A0A0MRZ9 124 aa12.71□□□□□ -0.37
SS18-208ENST00000577751 TRAV8-4A0A0B4J246 113 aa12.71□□□□□ -0.37
SS18-208ENST00000577751 D6R8Y8 96 aa12.71□□□□□ -0.37
SS18-208ENST00000577751 PPBPP02775 128 aa12.71□□□□□ -0.37
SS18-208ENST00000577751 FGF6P10767 208 aa12.71□□□□□ -0.37
SS18-208ENST00000577751 RPL32P62910 135 aaKnown RBP12.71□□□□□ -0.37
SS18-208ENST00000577751 BTF3L4Q96K17 158 aa12.71□□□□□ -0.37
SS18-208ENST00000577751 CTDSP1Q9GZU7 261 aa12.71□□□□□ -0.37
SS18-208ENST00000577751 TNFRSF6BO95407 300 aa12.7□□□□□ -0.38
SS18-208ENST00000577751 GCSHP23434 173 aa12.7□□□□□ -0.38
SS18-208ENST00000577751 KRTAP10-1P60331 282 aa12.7□□□□□ -0.38
SS18-208ENST00000577751 AMMECR1LQ6DCA0 310 aa12.7□□□□□ -0.38
SS18-208ENST00000577751 PHOX2AO14813 284 aa12.69□□□□□ -0.38
SS18-208ENST00000577751 ZNF25P17030 456 aaPredicted RBP12.69□□□□□ -0.38
SS18-208ENST00000577751 RNASEKQ6P5S7 137 aaKnown RBP12.69□□□□□ -0.38
SS18-208ENST00000577751 MRPL52Q86TS9 123 aaKnown RBP12.68□□□□□ -0.38
SS18-208ENST00000577751 KIR2DL4Q99706 377 aa12.68□□□□□ -0.38
SS18-208ENST00000577751 CARHSP1Q9Y2V2 147 aaKnown RBP12.68□□□□□ -0.38
SS18-208ENST00000577751 IGLV10-54A0A075B6I4 117 aa12.67□□□□□ -0.38
SS18-208ENST00000577751 C7orf77A4D0Y5 90 aa12.67□□□□□ -0.38
SS18-208ENST00000577751 NPYP01303 97 aa12.67□□□□□ -0.38
SS18-208ENST00000577751 HLA-DQA1P01909 254 aa12.67□□□□□ -0.38
SS18-208ENST00000577751 FCER1GP30273 86 aa12.67□□□□□ -0.38
SS18-208ENST00000577751 TMEM136Q6ZRR5 245 aa12.67□□□□□ -0.38
SS18-208ENST00000577751 ORMDL3Q8N138 153 aa12.67□□□□□ -0.38
SS18-208ENST00000577751 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
SS18-208ENST00000577751 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
SS18-208ENST00000577751 RYR1P21817 5038 aa12.66□□□□□ -0.38
SS18-208ENST00000577751 APOBP04114 4563 aaKnown RBP12.65□□□□□ -0.38
SS18-208ENST00000577751 TRAV9-1A0A075B6T8 112 aa12.64□□□□□ -0.39
SS18-208ENST00000577751 USP17L23D6RBM5 183 aa12.64□□□□□ -0.39
SS18-208ENST00000577751 TCAPO15273 167 aa12.64□□□□□ -0.39
SS18-208ENST00000577751 C14orf177Q52M58 125 aa12.64□□□□□ -0.39
SS18-208ENST00000577751 OR5A1Q8NGJ0 315 aa12.64□□□□□ -0.39
SS18-208ENST00000577751 TMEM101Q96IK0 257 aa12.64□□□□□ -0.39
SS18-208ENST00000577751 PRELID3AQ96N28 172 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms