RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 NUP35Q8NFH5 326 aa17.43■□□□□ 0.38
PPP4R1-204ENST00000577393 C1orf43Q9BWL3 253 aa17.42■□□□□ 0.38
PPP4R1-204ENST00000577393 TMEM191AQ9H0A3 160 aa17.42■□□□□ 0.38
PPP4R1-204ENST00000577393 AMTP48728 403 aa17.4■□□□□ 0.38
PPP4R1-204ENST00000577393 RIGQ13278 110 aa17.4■□□□□ 0.38
PPP4R1-204ENST00000577393 LINC00269Q8N2A0 174 aa17.4■□□□□ 0.38
PPP4R1-204ENST00000577393 KRTAP4-5Q9BYR2 181 aa17.4■□□□□ 0.38
PPP4R1-204ENST00000577393 PRR34Q9NV39 138 aa17.4■□□□□ 0.38
PPP4R1-204ENST00000577393 NAT8BQ9UHF3 227 aa17.4■□□□□ 0.38
PPP4R1-204ENST00000577393 RAB14P61106 215 aa17.39■□□□□ 0.37
PPP4R1-204ENST00000577393 MIAQ16674 131 aa17.39■□□□□ 0.37
PPP4R1-204ENST00000577393 CLPSL2Q6UWE3 100 aa17.39■□□□□ 0.37
PPP4R1-204ENST00000577393 RNF185Q96GF1 192 aa17.39■□□□□ 0.37
PPP4R1-204ENST00000577393 GAS8-AS1O95177 125 aa17.38■□□□□ 0.37
PPP4R1-204ENST00000577393 XGP55808 180 aa17.38■□□□□ 0.37
PPP4R1-204ENST00000577393 ABCA13Q86UQ4 5058 aa17.37■□□□□ 0.37
PPP4R1-204ENST00000577393 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.37■□□□□ 0.37
PPP4R1-204ENST00000577393 A0A1B0GUV1 79 aa17.37■□□□□ 0.37
PPP4R1-204ENST00000577393 SMIM27A0A1W2PRY6 76 aa17.37■□□□□ 0.37
PPP4R1-204ENST00000577393 SDHAF1A6NFY7 115 aa17.37■□□□□ 0.37
PPP4R1-204ENST00000577393 RAB4AP20338 218 aa17.37■□□□□ 0.37
PPP4R1-204ENST00000577393 AMN1Q8IY45 258 aa17.37■□□□□ 0.37
PPP4R1-204ENST00000577393 C20orf203Q8NBC4 194 aa17.37■□□□□ 0.37
PPP4R1-204ENST00000577393 IGLV4-60A0A075B6I1 120 aa17.36■□□□□ 0.37
PPP4R1-204ENST00000577393 TRBV6-5A0A0K0K1A5 114 aa17.36■□□□□ 0.37
PPP4R1-204ENST00000577393 UBE2L6O14933 153 aa17.36■□□□□ 0.37
PPP4R1-204ENST00000577393 Q8N1X5 172 aa17.35■□□□□ 0.37
PPP4R1-204ENST00000577393 NCR2O95944 276 aa17.34■□□□□ 0.37
PPP4R1-204ENST00000577393 REG3AQ06141 175 aa17.34■□□□□ 0.37
PPP4R1-204ENST00000577393 MRAP2Q96G30 205 aa17.34■□□□□ 0.37
PPP4R1-204ENST00000577393 DNAH8Q96JB1 4490 aa17.33■□□□□ 0.37
PPP4R1-204ENST00000577393 ST20Q9HBF5 79 aa17.33■□□□□ 0.36
PPP4R1-204ENST00000577393 PMCHP20382 165 aa17.32■□□□□ 0.36
PPP4R1-204ENST00000577393 I3L3M4 83 aa17.31■□□□□ 0.36
PPP4R1-204ENST00000577393 HLA-DQA1P01909 254 aa17.31■□□□□ 0.36
PPP4R1-204ENST00000577393 APCSP02743 223 aa17.31■□□□□ 0.36
PPP4R1-204ENST00000577393 RPS10P46783 165 aaKnown RBP17.31■□□□□ 0.36
PPP4R1-204ENST00000577393 KRTAP26-1Q6PEX3 210 aa17.31■□□□□ 0.36
PPP4R1-204ENST00000577393 TMEM70Q9BUB7 260 aa17.3■□□□□ 0.36
PPP4R1-204ENST00000577393 SMKR1H3BMG3 65 aa17.29■□□□□ 0.36
PPP4R1-204ENST00000577393 IGLV10-54A0A075B6I4 117 aa17.28■□□□□ 0.36
PPP4R1-204ENST00000577393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.28■□□□□ 0.36
PPP4R1-204ENST00000577393 IGKV2-29A2NJV5 120 aaPredicted RBP17.28■□□□□ 0.36
PPP4R1-204ENST00000577393 CAMPP49913 170 aa17.28■□□□□ 0.36
PPP4R1-204ENST00000577393 POLR2KP53803 58 aaKnown RBP17.28■□□□□ 0.36
PPP4R1-204ENST00000577393 C14orf177Q52M58 125 aa17.28■□□□□ 0.36
PPP4R1-204ENST00000577393 CLLU1Q5K131 121 aa17.28■□□□□ 0.36
PPP4R1-204ENST00000577393 FAT1Q14517 4588 aa17.27■□□□□ 0.36
PPP4R1-204ENST00000577393 USP17L23D6RBM5 183 aa17.27■□□□□ 0.36
PPP4R1-204ENST00000577393 FAM104BQ5XKR9 115 aa17.27■□□□□ 0.36
PPP4R1-204ENST00000577393 FAM30AQ9NZY2 134 aa17.27■□□□□ 0.36
PPP4R1-204ENST00000577393 TRAV8-4A0A0B4J246 113 aa17.26■□□□□ 0.35
PPP4R1-204ENST00000577393 A0A1B0GW15 77 aa17.26■□□□□ 0.35
PPP4R1-204ENST00000577393 H7C423 109 aa17.26■□□□□ 0.35
PPP4R1-204ENST00000577393 TSHBP01222 138 aa17.26■□□□□ 0.35
PPP4R1-204ENST00000577393 AMMECR1LQ6DCA0 310 aa17.26■□□□□ 0.35
PPP4R1-204ENST00000577393 TMEM242Q9NWH2 141 aa17.26■□□□□ 0.35
PPP4R1-204ENST00000577393 HAMPP81172 84 aa17.25■□□□□ 0.35
PPP4R1-204ENST00000577393 IFITM2Q01629 132 aa17.25■□□□□ 0.35
PPP4R1-204ENST00000577393 LINC01620Q4KN68 170 aa17.25■□□□□ 0.35
PPP4R1-204ENST00000577393 MRPL51Q4U2R6 128 aaKnown RBP17.25■□□□□ 0.35
PPP4R1-204ENST00000577393 TRBV27A0A0K0K1C4 114 aa17.24■□□□□ 0.35
PPP4R1-204ENST00000577393 MRPL54Q6P161 138 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-204ENST00000577393 RNASEKQ6P5S7 137 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-204ENST00000577393 NRACQ8N912 160 aa17.24■□□□□ 0.35
PPP4R1-204ENST00000577393 PPP1R17O96001 155 aa17.23■□□□□ 0.35
PPP4R1-204ENST00000577393 FGF6P10767 208 aa17.23■□□□□ 0.35
PPP4R1-204ENST00000577393 ESDP10768 282 aa17.23■□□□□ 0.35
PPP4R1-204ENST00000577393 PPP1R2P9O14990 202 aa17.22■□□□□ 0.35
PPP4R1-204ENST00000577393 HBBP68871 147 aa17.22■□□□□ 0.35
PPP4R1-204ENST00000577393 PNRC1Q12796 327 aaPredicted RBP17.22■□□□□ 0.35
PPP4R1-204ENST00000577393 A0A1B0GXF2 115 aa17.21■□□□□ 0.35
PPP4R1-204ENST00000577393 VCYO14598 125 aa17.21■□□□□ 0.35
PPP4R1-204ENST00000577393 IGKV3OR2-268A0A0C4DH90 116 aa17.2■□□□□ 0.34
PPP4R1-204ENST00000577393 S100A8P05109 93 aa17.2■□□□□ 0.34
PPP4R1-204ENST00000577393 PRSS1P07477 247 aa17.2■□□□□ 0.34
PPP4R1-204ENST00000577393 SUMO2P61956 95 aaKnown RBP17.2■□□□□ 0.34
PPP4R1-204ENST00000577393 LINC00862A6NCI5 91 aa17.19■□□□□ 0.34
PPP4R1-204ENST00000577393 Q6ZSA8 131 aa17.19■□□□□ 0.34
PPP4R1-204ENST00000577393 EPM2AB3EWF7 344 aa17.18■□□□□ 0.34
PPP4R1-204ENST00000577393 F8W036 122 aa17.18■□□□□ 0.34
PPP4R1-204ENST00000577393 SMR3BP02814 79 aaPredicted RBP17.18■□□□□ 0.34
PPP4R1-204ENST00000577393 ZNF25P17030 456 aaPredicted RBP17.18■□□□□ 0.34
PPP4R1-204ENST00000577393 CKS2P33552 79 aa17.18■□□□□ 0.34
PPP4R1-204ENST00000577393 BTF3L4Q96K17 158 aa17.17■□□□□ 0.34
PPP4R1-204ENST00000577393 MT-ND4LP03901 98 aa17.16■□□□□ 0.34
PPP4R1-204ENST00000577393 FCER1GP30273 86 aa17.16■□□□□ 0.34
PPP4R1-204ENST00000577393 ANAPC16Q96DE5 110 aa17.16■□□□□ 0.34
PPP4R1-204ENST00000577393 TMEM101Q96IK0 257 aa17.16■□□□□ 0.34
PPP4R1-204ENST00000577393 C7orf77A4D0Y5 90 aa17.15■□□□□ 0.34
PPP4R1-204ENST00000577393 ATP5L2Q7Z4Y8 100 aa17.15■□□□□ 0.34
PPP4R1-204ENST00000577393 TRBV24-1A0A075B6N3 115 aa17.14■□□□□ 0.33
PPP4R1-204ENST00000577393 GAGE12HA6NDE8 117 aa17.14■□□□□ 0.33
PPP4R1-204ENST00000577393 CLRN3Q8NCR9 226 aa17.14■□□□□ 0.33
PPP4R1-204ENST00000577393 OR5A1Q8NGJ0 315 aa17.14■□□□□ 0.33
PPP4R1-204ENST00000577393 KIR2DL4Q99706 377 aa17.14■□□□□ 0.33
PPP4R1-204ENST00000577393 C20orf78Q9BR46 151 aa17.14■□□□□ 0.33
PPP4R1-204ENST00000577393 D6R8Y8 96 aa17.13■□□□□ 0.33
PPP4R1-204ENST00000577393 TNFRSF6BO95407 300 aa17.13■□□□□ 0.33
PPP4R1-204ENST00000577393 Q5VSD8 79 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms