RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
SLC12A4-217ENST00000576462 IGKV2-24A0A0C4DH68 120 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 UMAD1C9J7I0 102 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 H2AFB1P0C5Y9 115 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 AMTP48728 403 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 CACNG7P62955 275 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 ODF1Q14990 250 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 MAJINQ3KP22 176 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 HIGD2BQ4VC39 106 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 CENPWQ5EE01 88 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 C9orf62Q8N4C0 152 aa12.52□□□□□ -0.41
SLC12A4-217ENST00000576462 RPS20P60866 119 aaKnown RBP12.51□□□□□ -0.41
SLC12A4-217ENST00000576462 NIT2Q9NQR4 276 aa12.51□□□□□ -0.41
SLC12A4-217ENST00000576462 COTL1Q14019 142 aa12.5□□□□□ -0.41
SLC12A4-217ENST00000576462 CFAP161Q6P656 301 aa12.5□□□□□ -0.41
SLC12A4-217ENST00000576462 PRSS3P2Q8NHM4 247 aa12.5□□□□□ -0.41
SLC12A4-217ENST00000576462 LYPD6BQ8NI32 183 aa12.5□□□□□ -0.41
SLC12A4-217ENST00000576462 PGLYRP4Q96LB8 373 aa12.5□□□□□ -0.41
SLC12A4-217ENST00000576462 RPS10P46783 165 aaKnown RBP12.49□□□□□ -0.41
SLC12A4-217ENST00000576462 GNG13Q9P2W3 67 aa12.49□□□□□ -0.41
SLC12A4-217ENST00000576462 NDUFS6O75380 124 aaKnown RBP12.48□□□□□ -0.41
SLC12A4-217ENST00000576462 TRGC1P0CF51 173 aa12.48□□□□□ -0.41
SLC12A4-217ENST00000576462 CCL20P78556 96 aa12.48□□□□□ -0.41
SLC12A4-217ENST00000576462 LYZL1Q6UWQ5 148 aa12.48□□□□□ -0.41
SLC12A4-217ENST00000576462 STPG4Q8N801 248 aa12.48□□□□□ -0.41
SLC12A4-217ENST00000576462 RAB19A4D1S5 217 aa12.47□□□□□ -0.41
SLC12A4-217ENST00000576462 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
SLC12A4-217ENST00000576462 HMSDA8MTL9 139 aa12.47□□□□□ -0.41
SLC12A4-217ENST00000576462 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
SLC12A4-217ENST00000576462 C11orf52Q96A22 123 aa12.47□□□□□ -0.41
SLC12A4-217ENST00000576462 LINC01600Q96MT4 127 aa12.47□□□□□ -0.41
SLC12A4-217ENST00000576462 F2Z2F3 143 aa12.46□□□□□ -0.41
SLC12A4-217ENST00000576462 NTF3P20783 257 aa12.46□□□□□ -0.41
SLC12A4-217ENST00000576462 ZNF345Q14585 488 aa12.46□□□□□ -0.41
SLC12A4-217ENST00000576462 MANBALQ9NQG1 85 aa12.46□□□□□ -0.41
SLC12A4-217ENST00000576462 KANTRA0A1W2PQU2 76 aa12.45□□□□□ -0.42
SLC12A4-217ENST00000576462 XKRY2A2RUG3 117 aa12.45□□□□□ -0.42
SLC12A4-217ENST00000576462 IFNA1P01562 189 aa12.45□□□□□ -0.42
SLC12A4-217ENST00000576462 CHCHD10Q8WYQ3 142 aaPredicted RBP12.45□□□□□ -0.42
SLC12A4-217ENST00000576462 GNG4P50150 75 aa12.44□□□□□ -0.42
SLC12A4-217ENST00000576462 IFITM2Q01629 132 aa12.44□□□□□ -0.42
SLC12A4-217ENST00000576462 AMMECR1LQ6DCA0 310 aa12.44□□□□□ -0.42
SLC12A4-217ENST00000576462 TRAV26-2A0A0B4J265 109 aa12.43□□□□□ -0.42
SLC12A4-217ENST00000576462 BCL2L11O43521 198 aa12.43□□□□□ -0.42
SLC12A4-217ENST00000576462 RNASEKQ6P5S7 137 aaKnown RBP12.43□□□□□ -0.42
SLC12A4-217ENST00000576462 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.42□□□□□ -0.42
SLC12A4-217ENST00000576462 A0A096LNI7 61 aa12.42□□□□□ -0.42
SLC12A4-217ENST00000576462 IGKV2-29A2NJV5 120 aaPredicted RBP12.42□□□□□ -0.42
SLC12A4-217ENST00000576462 TWIST1Q15672 202 aa12.42□□□□□ -0.42
SLC12A4-217ENST00000576462 GATD1Q8NB37 220 aa12.42□□□□□ -0.42
SLC12A4-217ENST00000576462 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
SLC12A4-217ENST00000576462 A0A0J9YXV3 536 aa12.4□□□□□ -0.42
SLC12A4-217ENST00000576462 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
SLC12A4-217ENST00000576462 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
SLC12A4-217ENST00000576462 SMIM12Q96EX1 92 aa12.39□□□□□ -0.43
SLC12A4-217ENST00000576462 MED9Q9NWA0 146 aa12.39□□□□□ -0.43
SLC12A4-217ENST00000576462 TRBV20OR9-2A0A075B6H5 130 aa12.38□□□□□ -0.43
SLC12A4-217ENST00000576462 FGF6P10767 208 aa12.38□□□□□ -0.43
SLC12A4-217ENST00000576462 CTRLP40313 264 aa12.38□□□□□ -0.43
SLC12A4-217ENST00000576462 FOXI1Q12951 378 aa12.38□□□□□ -0.43
SLC12A4-217ENST00000576462 NUDT10Q8NFP7 164 aa12.38□□□□□ -0.43
SLC12A4-217ENST00000576462 LINC00526Q96FQ7 95 aa12.38□□□□□ -0.43
SLC12A4-217ENST00000576462 NUDT11Q96G61 164 aa12.38□□□□□ -0.43
SLC12A4-217ENST00000576462 APCSP02743 223 aa12.37□□□□□ -0.43
SLC12A4-217ENST00000576462 XCL1P47992 114 aa12.37□□□□□ -0.43
SLC12A4-217ENST00000576462 SPINK6Q6UWN8 80 aa12.37□□□□□ -0.43
SLC12A4-217ENST00000576462 BIN3Q9NQY0 253 aa12.37□□□□□ -0.43
SLC12A4-217ENST00000576462 TRAV1-1A0A0B4J248 108 aa12.36□□□□□ -0.43
SLC12A4-217ENST00000576462 KRTAP10-8P60410 259 aa12.36□□□□□ -0.43
SLC12A4-217ENST00000576462 MEF2BQ02080 365 aaPredicted RBP12.36□□□□□ -0.43
SLC12A4-217ENST00000576462 REG3GQ6UW15 175 aa12.36□□□□□ -0.43
SLC12A4-217ENST00000576462 TEX46H3BTG2 121 aa12.35□□□□□ -0.43
SLC12A4-217ENST00000576462 PDE6DO43924 150 aa12.35□□□□□ -0.43
SLC12A4-217ENST00000576462 NCR2O95944 276 aa12.35□□□□□ -0.43
SLC12A4-217ENST00000576462 FOXA3P55318 350 aaPredicted RBP12.35□□□□□ -0.43
SLC12A4-217ENST00000576462 LINC00474Q9P2X8 69 aa12.35□□□□□ -0.43
SLC12A4-217ENST00000576462 H7C423 109 aa12.34□□□□□ -0.43
SLC12A4-217ENST00000576462 OR5A1Q8NGJ0 315 aa12.34□□□□□ -0.43
SLC12A4-217ENST00000576462 CARD19Q96LW7 228 aa12.34□□□□□ -0.43
SLC12A4-217ENST00000576462 CNFNQ9BYD5 112 aa12.34□□□□□ -0.43
SLC12A4-217ENST00000576462 RNASE7Q9H1E1 156 aaKnown RBP12.34□□□□□ -0.43
SLC12A4-217ENST00000576462 SDHAF1A6NFY7 115 aa12.33□□□□□ -0.44
SLC12A4-217ENST00000576462 CCL25O15444 150 aa12.33□□□□□ -0.44
SLC12A4-217ENST00000576462 BTF3L4Q96K17 158 aa12.33□□□□□ -0.44
SLC12A4-217ENST00000576462 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
SLC12A4-217ENST00000576462 IGHV1-58A0A0C4DH39 117 aa12.32□□□□□ -0.44
SLC12A4-217ENST00000576462 TEX261Q6UWH6 196 aa12.32□□□□□ -0.44
SLC12A4-217ENST00000576462 SMIM15Q7Z3B0 74 aa12.32□□□□□ -0.44
SLC12A4-217ENST00000576462 SLC51BQ86UW2 128 aa12.32□□□□□ -0.44
SLC12A4-217ENST00000576462 TMEM101Q96IK0 257 aa12.32□□□□□ -0.44
SLC12A4-217ENST00000576462 LINC00959A0A1B0GUT2 108 aa12.31□□□□□ -0.44
SLC12A4-217ENST00000576462 PMCHP20382 165 aa12.31□□□□□ -0.44
SLC12A4-217ENST00000576462 SRSF9Q13242 221 aaKnown RBP eCLIP12.31□□□□□ -0.44
SLC12A4-217ENST00000576462 Q6ZRP5 223 aa12.31□□□□□ -0.44
SLC12A4-217ENST00000576462 PKIGQ9Y2B9 76 aa12.31□□□□□ -0.44
SLC12A4-217ENST00000576462 BCL2P10415 239 aa12.3□□□□□ -0.44
SLC12A4-217ENST00000576462 ZNF25P17030 456 aaPredicted RBP12.3□□□□□ -0.44
SLC12A4-217ENST00000576462 FAM231BA6NCW3 169 aa12.29□□□□□ -0.44
SLC12A4-217ENST00000576462 I3L3M4 83 aa12.29□□□□□ -0.44
SLC12A4-217ENST00000576462 ZNF561-AS1K7EIQ3 104 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms