RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 ORMDL3Q8N138 153 aa6.46□□□□□ -1.38
CCDC40-214ENST00000575431 TM2D2Q9BX73 214 aa6.46□□□□□ -1.38
CCDC40-214ENST00000575431 LAMTOR2Q9Y2Q5 125 aa6.46□□□□□ -1.38
CCDC40-214ENST00000575431 COX11Q9Y6N1 276 aa6.46□□□□□ -1.38
CCDC40-214ENST00000575431 RYR3Q15413 4870 aa6.46□□□□□ -1.38
CCDC40-214ENST00000575431 HYDINQ4G0P3 5121 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 A0A1B0GUV1 79 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 UBE2L6O14933 153 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 APCSP02743 223 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 RPS10P46783 165 aaKnown RBP6.45□□□□□ -1.38
CCDC40-214ENST00000575431 Q0VG73 95 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 ATRAIDQ6UW56 229 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 TMEM136Q6ZRR5 245 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 NRACQ8N912 160 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 RMI2Q96E14 147 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 KIR2DL4Q99706 377 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 SACSQ9NZJ4 4579 aa6.45□□□□□ -1.38
CCDC40-214ENST00000575431 D6R8Y8 96 aa6.44□□□□□ -1.38
CCDC40-214ENST00000575431 GAS8-AS1O95177 125 aa6.44□□□□□ -1.38
CCDC40-214ENST00000575431 TNFRSF6BO95407 300 aa6.44□□□□□ -1.38
CCDC40-214ENST00000575431 HLA-DQA1P01909 254 aa6.44□□□□□ -1.38
CCDC40-214ENST00000575431 SMAGPQ0VAQ4 97 aa6.44□□□□□ -1.38
CCDC40-214ENST00000575431 Q6ZRN7 208 aaPredicted RBP6.44□□□□□ -1.38
CCDC40-214ENST00000575431 GNB1LQ9BYB4 327 aa6.44□□□□□ -1.38
CCDC40-214ENST00000575431 KLK12Q9UKR0 248 aa6.44□□□□□ -1.38
CCDC40-214ENST00000575431 LYSTQ99698 3801 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 PRSS47A8MTI9 375 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 SMKR1H3BMG3 65 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 EREGO14944 169 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 PSCAO43653 123 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 CRPP02741 224 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 MT-ND6P03923 174 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
CCDC40-214ENST00000575431 ZNF25P17030 456 aaPredicted RBP6.43□□□□□ -1.38
CCDC40-214ENST00000575431 FCER1GP30273 86 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 RBX1P62877 108 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 GAGE6Q13070 117 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 MPV17L2Q567V2 206 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 PRELID3AQ96N28 172 aa6.43□□□□□ -1.38
CCDC40-214ENST00000575431 TSHBP01222 138 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 NPYP01303 97 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 ESDP10768 282 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 TNP2Q05952 138 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 MIAQ16674 131 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 AMMECR1LQ6DCA0 310 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 Q8N976 141 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 UBE2WQ96B02 151 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 TMEM18Q96B42 140 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 SMIM2Q9BVW6 85 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 Q9HAA7 133 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 DNAH1Q9P2D7 4330 aa6.42□□□□□ -1.38
CCDC40-214ENST00000575431 VPS13DQ5THJ4 4388 aa6.41□□□□□ -1.38
CCDC40-214ENST00000575431 K7EMI3 77 aa6.41□□□□□ -1.38
CCDC40-214ENST00000575431 SLC7A5P1Q8MH63 180 aa6.41□□□□□ -1.38
CCDC40-214ENST00000575431 Q8N3U1 123 aa6.41□□□□□ -1.38
CCDC40-214ENST00000575431 TMEM101Q96IK0 257 aa6.41□□□□□ -1.38
CCDC40-214ENST00000575431 MAP1LC3AQ9H492 121 aa6.41□□□□□ -1.38
CCDC40-214ENST00000575431 PRR34Q9NV39 138 aa6.41□□□□□ -1.38
CCDC40-214ENST00000575431 TRAV8-4A0A0B4J246 113 aa6.4□□□□□ -1.38
CCDC40-214ENST00000575431 A0A1B0GVY2 172 aa6.4□□□□□ -1.38
CCDC40-214ENST00000575431 FGF6P10767 208 aa6.4□□□□□ -1.38
CCDC40-214ENST00000575431 RAB5AP20339 215 aa6.4□□□□□ -1.38
CCDC40-214ENST00000575431 RNASEKQ6P5S7 137 aaKnown RBP6.4□□□□□ -1.38
CCDC40-214ENST00000575431 MRPL52Q86TS9 123 aaKnown RBP6.4□□□□□ -1.38
CCDC40-214ENST00000575431 DEFB104AQ8WTQ1 72 aa6.4□□□□□ -1.38
CCDC40-214ENST00000575431 C1orf43Q9BWL3 253 aa6.4□□□□□ -1.38
CCDC40-214ENST00000575431 IGKV2D-24A0A075B6R9 120 aa6.39□□□□□ -1.39
CCDC40-214ENST00000575431 G0S2P27469 103 aa6.39□□□□□ -1.39
CCDC40-214ENST00000575431 REG3AQ06141 175 aa6.39□□□□□ -1.39
CCDC40-214ENST00000575431 DGAT2L7PQ6IED9 249 aa6.39□□□□□ -1.39
CCDC40-214ENST00000575431 ENHOQ6UWT2 76 aa6.39□□□□□ -1.39
CCDC40-214ENST00000575431 LINC00269Q8N2A0 174 aa6.39□□□□□ -1.39
CCDC40-214ENST00000575431 C20orf203Q8NBC4 194 aa6.39□□□□□ -1.39
CCDC40-214ENST00000575431 OR5A1Q8NGJ0 315 aa6.39□□□□□ -1.39
CCDC40-214ENST00000575431 NXT2Q9NPJ8 142 aaKnown RBP6.39□□□□□ -1.39
CCDC40-214ENST00000575431 CSDC2Q9Y534 153 aaKnown RBP6.39□□□□□ -1.39
CCDC40-214ENST00000575431 IGLV4-60A0A075B6I1 120 aa6.38□□□□□ -1.39
CCDC40-214ENST00000575431 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.38□□□□□ -1.39
CCDC40-214ENST00000575431 A0A087WTM6 91 aa6.38□□□□□ -1.39
CCDC40-214ENST00000575431 IGKV2-29A2NJV5 120 aaPredicted RBP6.38□□□□□ -1.39
CCDC40-214ENST00000575431 Q8N8P6 123 aa6.38□□□□□ -1.39
CCDC40-214ENST00000575431 TIMM21Q9BVV7 248 aa6.38□□□□□ -1.39
CCDC40-214ENST00000575431 SMCO4Q9NRQ5 59 aa6.38□□□□□ -1.39
CCDC40-214ENST00000575431 PGPEP1Q9NXJ5 209 aa6.38□□□□□ -1.39
CCDC40-214ENST00000575431 TGIF2-C20orf24A0A0A6YYL0 155 aa6.37□□□□□ -1.39
CCDC40-214ENST00000575431 FABP9Q0Z7S8 132 aa6.37□□□□□ -1.39
CCDC40-214ENST00000575431 ORMDL2Q53FV1 153 aa6.37□□□□□ -1.39
CCDC40-214ENST00000575431 MRPL18Q9H0U6 180 aaKnown RBP6.37□□□□□ -1.39
CCDC40-214ENST00000575431 TRAPPC1Q9Y5R8 145 aa6.37□□□□□ -1.39
CCDC40-214ENST00000575431 LOC389332A0A1B0GUA5 103 aa6.36□□□□□ -1.39
CCDC40-214ENST00000575431 LRCOL1A6NCL2 159 aa6.36□□□□□ -1.39
CCDC40-214ENST00000575431 CCL25O15444 150 aa6.36□□□□□ -1.39
CCDC40-214ENST00000575431 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
CCDC40-214ENST00000575431 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
CCDC40-214ENST00000575431 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
CCDC40-214ENST00000575431 KMT2AQ03164 3969 aa6.36□□□□□ -1.39
CCDC40-214ENST00000575431 LINC01549A6NIU2 74 aa6.35□□□□□ -1.39
CCDC40-214ENST00000575431 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
CCDC40-214ENST00000575431 C14orf177Q52M58 125 aa6.35□□□□□ -1.39
CCDC40-214ENST00000575431 CLPSL2Q6UWE3 100 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms