RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 NDUFA5Q16718 116 aa10.22□□□□□ -0.77
LITAF-217ENST00000575426 MPV17L2Q567V2 206 aa10.22□□□□□ -0.77
LITAF-217ENST00000575426 C10orf91Q5T1B1 145 aa10.22□□□□□ -0.77
LITAF-217ENST00000575426 CARHSP1Q9Y2V2 147 aaKnown RBP10.22□□□□□ -0.77
LITAF-217ENST00000575426 DNAH10Q8IVF4 4471 aa10.22□□□□□ -0.77
LITAF-217ENST00000575426 A0A1B0GVY2 172 aa10.21□□□□□ -0.77
LITAF-217ENST00000575426 CRPP02741 224 aa10.21□□□□□ -0.77
LITAF-217ENST00000575426 RPS10P46783 165 aaKnown RBP10.21□□□□□ -0.77
LITAF-217ENST00000575426 Q0VG73 95 aa10.21□□□□□ -0.77
LITAF-217ENST00000575426 UBE2WQ96B02 151 aa10.21□□□□□ -0.77
LITAF-217ENST00000575426 TMEM70Q9BUB7 260 aa10.21□□□□□ -0.77
LITAF-217ENST00000575426 COX11Q9Y6N1 276 aa10.21□□□□□ -0.77
LITAF-217ENST00000575426 FRAS1Q86XX4 4008 aa10.21□□□□□ -0.78
LITAF-217ENST00000575426 VCYO14598 125 aa10.2□□□□□ -0.78
LITAF-217ENST00000575426 PPBPP02775 128 aa10.2□□□□□ -0.78
LITAF-217ENST00000575426 RBX1P62877 108 aa10.2□□□□□ -0.78
LITAF-217ENST00000575426 Q8N976 141 aa10.2□□□□□ -0.78
LITAF-217ENST00000575426 CLRN3Q8NCR9 226 aa10.2□□□□□ -0.78
LITAF-217ENST00000575426 RPS10P5Q9NQ39 176 aa10.2□□□□□ -0.78
LITAF-217ENST00000575426 TRAV9-1A0A075B6T8 112 aa10.19□□□□□ -0.78
LITAF-217ENST00000575426 C7orf77A4D0Y5 90 aa10.19□□□□□ -0.78
LITAF-217ENST00000575426 POLR2KP53803 58 aaKnown RBP10.19□□□□□ -0.78
LITAF-217ENST00000575426 SUMO2P61956 95 aaKnown RBP10.19□□□□□ -0.78
LITAF-217ENST00000575426 RHEBQ15382 184 aa10.19□□□□□ -0.78
LITAF-217ENST00000575426 NRACQ8N912 160 aa10.19□□□□□ -0.78
LITAF-217ENST00000575426 TMEM242Q9NWH2 141 aa10.19□□□□□ -0.78
LITAF-217ENST00000575426 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 TRBV27A0A0K0K1C4 114 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 A0A1B0GUV1 79 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 D6R8Y8 96 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 APOC3P02656 99 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 FCER1GP30273 86 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 AMMECR1LQ6DCA0 310 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 ORMDL3Q8N138 153 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 C20orf78Q9BR46 151 aa10.18□□□□□ -0.78
LITAF-217ENST00000575426 DNAH2Q9P225 4427 aa10.17□□□□□ -0.78
LITAF-217ENST00000575426 H7C423 109 aa10.17□□□□□ -0.78
LITAF-217ENST00000575426 TNFRSF6BO95407 300 aa10.17□□□□□ -0.78
LITAF-217ENST00000575426 TMEM136Q6ZRR5 245 aa10.17□□□□□ -0.78
LITAF-217ENST00000575426 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 TRBV24-1A0A075B6N3 115 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 A0A087WTM6 91 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 PHOX2AO14813 284 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 SNAPINO95295 136 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 TSHBP01222 138 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 RNASEKQ6P5S7 137 aaKnown RBP10.16□□□□□ -0.78
LITAF-217ENST00000575426 SPATA12Q7Z6I5 190 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 LINC00269Q8N2A0 174 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 SVBPQ8N300 66 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 PRELID3AQ96N28 172 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 C1orf43Q9BWL3 253 aa10.16□□□□□ -0.78
LITAF-217ENST00000575426 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.15□□□□□ -0.78
LITAF-217ENST00000575426 IGKV2-29A2NJV5 120 aaPredicted RBP10.15□□□□□ -0.78
LITAF-217ENST00000575426 TCAPO15273 167 aa10.15□□□□□ -0.78
LITAF-217ENST00000575426 MIAQ16674 131 aa10.15□□□□□ -0.78
LITAF-217ENST00000575426 ENHOQ6UWT2 76 aa10.15□□□□□ -0.78
LITAF-217ENST00000575426 TMEM101Q96IK0 257 aa10.15□□□□□ -0.78
LITAF-217ENST00000575426 IGLV4-60A0A075B6I1 120 aa10.14□□□□□ -0.79
LITAF-217ENST00000575426 NPYP01303 97 aa10.14□□□□□ -0.79
LITAF-217ENST00000575426 RPL32P62910 135 aaKnown RBP10.14□□□□□ -0.79
LITAF-217ENST00000575426 REG3AQ06141 175 aa10.14□□□□□ -0.79
LITAF-217ENST00000575426 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
LITAF-217ENST00000575426 CLPSL2Q6UWE3 100 aa10.14□□□□□ -0.79
LITAF-217ENST00000575426 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
LITAF-217ENST00000575426 FGF6P10767 208 aa10.13□□□□□ -0.79
LITAF-217ENST00000575426 ESDP10768 282 aa10.13□□□□□ -0.79
LITAF-217ENST00000575426 ZNF25P17030 456 aaPredicted RBP10.13□□□□□ -0.79
LITAF-217ENST00000575426 COX19Q49B96 90 aa10.13□□□□□ -0.79
LITAF-217ENST00000575426 TMEM18Q96B42 140 aa10.13□□□□□ -0.79
LITAF-217ENST00000575426 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
LITAF-217ENST00000575426 PRR34Q9NV39 138 aa10.13□□□□□ -0.79
LITAF-217ENST00000575426 PGPEP1Q9NXJ5 209 aa10.13□□□□□ -0.79
LITAF-217ENST00000575426 LAMTOR2Q9Y2Q5 125 aa10.13□□□□□ -0.79
LITAF-217ENST00000575426 C16orf90A8MZG2 172 aa10.12□□□□□ -0.79
LITAF-217ENST00000575426 EPPK1P58107 5090 aaKnown RBP10.12□□□□□ -0.79
LITAF-217ENST00000575426 TRAV8-4A0A0B4J246 113 aa10.11□□□□□ -0.79
LITAF-217ENST00000575426 LRCOL1A6NCL2 159 aa10.11□□□□□ -0.79
LITAF-217ENST00000575426 HLA-DQA1P01909 254 aa10.11□□□□□ -0.79
LITAF-217ENST00000575426 RAB5AP20339 215 aa10.11□□□□□ -0.79
LITAF-217ENST00000575426 DGAT2L7PQ6IED9 249 aa10.11□□□□□ -0.79
LITAF-217ENST00000575426 MAP1LC3AQ9H492 121 aa10.11□□□□□ -0.79
LITAF-217ENST00000575426 OR5A1Q8NGJ0 315 aa10.1□□□□□ -0.79
LITAF-217ENST00000575426 BAALCQ8WXS3 180 aa10.1□□□□□ -0.79
LITAF-217ENST00000575426 GNB1LQ9BYB4 327 aa10.1□□□□□ -0.79
LITAF-217ENST00000575426 IGKV3OR2-268A0A0C4DH90 116 aa10.09□□□□□ -0.79
LITAF-217ENST00000575426 LOC389332A0A1B0GUA5 103 aa10.09□□□□□ -0.79
LITAF-217ENST00000575426 KRTAP10-2P60368 255 aa10.09□□□□□ -0.79
LITAF-217ENST00000575426 CDPF1Q6NVV7 123 aa10.09□□□□□ -0.79
LITAF-217ENST00000575426 SLC7A5P1Q8MH63 180 aa10.09□□□□□ -0.79
LITAF-217ENST00000575426 FAT2Q9NYQ8 4349 aa10.08□□□□□ -0.8
LITAF-217ENST00000575426 IGLV10-54A0A075B6I4 117 aa10.08□□□□□ -0.8
LITAF-217ENST00000575426 PRSS47A8MTI9 375 aa10.08□□□□□ -0.8
LITAF-217ENST00000575426 LECT2O14960 151 aa10.08□□□□□ -0.8
LITAF-217ENST00000575426 MRPL52Q86TS9 123 aaKnown RBP10.08□□□□□ -0.8
LITAF-217ENST00000575426 Q8N814 137 aa10.08□□□□□ -0.8
LITAF-217ENST00000575426 MAPKAPK5-AS1Q8N8E1 139 aa10.08□□□□□ -0.8
LITAF-217ENST00000575426 PKD1P98161 4303 aa10.07□□□□□ -0.8
LITAF-217ENST00000575426 MT-ND6P03923 174 aa10.07□□□□□ -0.8
LITAF-217ENST00000575426 KIAA1644Q3SXP7 199 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms