RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 GNG13Q9P2W3 67 aa10.57□□□□□ -0.72
TVP23A-209ENST00000575135 RAB19A4D1S5 217 aa10.56□□□□□ -0.72
TVP23A-209ENST00000575135 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
TVP23A-209ENST00000575135 COX6A2Q02221 97 aa10.56□□□□□ -0.72
TVP23A-209ENST00000575135 WDR73Q6P4I2 378 aa10.56□□□□□ -0.72
TVP23A-209ENST00000575135 MANBALQ9NQG1 85 aa10.56□□□□□ -0.72
TVP23A-209ENST00000575135 KANTRA0A1W2PQU2 76 aa10.55□□□□□ -0.72
TVP23A-209ENST00000575135 F2Z2F3 143 aa10.55□□□□□ -0.72
TVP23A-209ENST00000575135 BCL2L11O43521 198 aa10.55□□□□□ -0.72
TVP23A-209ENST00000575135 TRGC1P0CF51 173 aa10.55□□□□□ -0.72
TVP23A-209ENST00000575135 AMTP48728 403 aa10.55□□□□□ -0.72
TVP23A-209ENST00000575135 LYZL1Q6UWQ5 148 aa10.55□□□□□ -0.72
TVP23A-209ENST00000575135 C7orf33Q8WU49 177 aa10.55□□□□□ -0.72
TVP23A-209ENST00000575135 DPH3P1Q9H4G8 78 aa10.55□□□□□ -0.72
TVP23A-209ENST00000575135 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
TVP23A-209ENST00000575135 HMSDA8MTL9 139 aa10.54□□□□□ -0.72
TVP23A-209ENST00000575135 IFNA1P01562 189 aa10.54□□□□□ -0.72
TVP23A-209ENST00000575135 NTF3P20783 257 aa10.54□□□□□ -0.72
TVP23A-209ENST00000575135 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
TVP23A-209ENST00000575135 COTL1Q14019 142 aa10.54□□□□□ -0.72
TVP23A-209ENST00000575135 CFAP161Q6P656 301 aa10.54□□□□□ -0.72
TVP23A-209ENST00000575135 XKRY2A2RUG3 117 aa10.53□□□□□ -0.72
TVP23A-209ENST00000575135 GNG4P50150 75 aa10.53□□□□□ -0.72
TVP23A-209ENST00000575135 MAJINQ3KP22 176 aa10.53□□□□□ -0.72
TVP23A-209ENST00000575135 HIGD2BQ4VC39 106 aa10.53□□□□□ -0.72
TVP23A-209ENST00000575135 PRSS3P2Q8NHM4 247 aa10.53□□□□□ -0.72
TVP23A-209ENST00000575135 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
TVP23A-209ENST00000575135 IGKV2-24A0A0C4DH68 120 aa10.52□□□□□ -0.73
TVP23A-209ENST00000575135 C9orf62Q8N4C0 152 aa10.52□□□□□ -0.73
TVP23A-209ENST00000575135 TRAV1-1A0A0B4J248 108 aa10.51□□□□□ -0.73
TVP23A-209ENST00000575135 NDUFS6O75380 124 aaKnown RBP10.51□□□□□ -0.73
TVP23A-209ENST00000575135 EIF5AP63241 154 aaKnown RBP10.51□□□□□ -0.73
TVP23A-209ENST00000575135 SMIM12Q96EX1 92 aa10.51□□□□□ -0.73
TVP23A-209ENST00000575135 TRBV20OR9-2A0A075B6H5 130 aa10.5□□□□□ -0.73
TVP23A-209ENST00000575135 ODF1Q14990 250 aa10.5□□□□□ -0.73
TVP23A-209ENST00000575135 STPG4Q8N801 248 aa10.5□□□□□ -0.73
TVP23A-209ENST00000575135 GATD1Q8NB37 220 aa10.5□□□□□ -0.73
TVP23A-209ENST00000575135 LYPD6BQ8NI32 183 aa10.5□□□□□ -0.73
TVP23A-209ENST00000575135 CHCHD10Q8WYQ3 142 aaPredicted RBP10.5□□□□□ -0.73
TVP23A-209ENST00000575135 LINC01600Q96MT4 127 aa10.5□□□□□ -0.73
TVP23A-209ENST00000575135 TRAV26-2A0A0B4J265 109 aa10.49□□□□□ -0.73
TVP23A-209ENST00000575135 CTRLP40313 264 aa10.49□□□□□ -0.73
TVP23A-209ENST00000575135 PRR3P79522 188 aaKnown RBP10.49□□□□□ -0.73
TVP23A-209ENST00000575135 TWIST1Q15672 202 aa10.49□□□□□ -0.73
TVP23A-209ENST00000575135 MED9Q9NWA0 146 aa10.49□□□□□ -0.73
TVP23A-209ENST00000575135 GVQW2A0A096LPI5 108 aaPredicted RBP10.48□□□□□ -0.73
TVP23A-209ENST00000575135 MEF2BQ02080 365 aaPredicted RBP10.48□□□□□ -0.73
TVP23A-209ENST00000575135 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
TVP23A-209ENST00000575135 RNASEKQ6P5S7 137 aaKnown RBP10.48□□□□□ -0.73
TVP23A-209ENST00000575135 Q6ZNX1 250 aa10.48□□□□□ -0.73
TVP23A-209ENST00000575135 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
TVP23A-209ENST00000575135 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
TVP23A-209ENST00000575135 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.47□□□□□ -0.73
TVP23A-209ENST00000575135 A0A096LNI7 61 aa10.47□□□□□ -0.73
TVP23A-209ENST00000575135 IGKV2-29A2NJV5 120 aaPredicted RBP10.47□□□□□ -0.73
TVP23A-209ENST00000575135 PDE6DO43924 150 aa10.47□□□□□ -0.73
TVP23A-209ENST00000575135 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
TVP23A-209ENST00000575135 CNFNQ9BYD5 112 aa10.47□□□□□ -0.73
TVP23A-209ENST00000575135 BIN3Q9NQY0 253 aa10.47□□□□□ -0.73
TVP23A-209ENST00000575135 TEX46H3BTG2 121 aa10.46□□□□□ -0.73
TVP23A-209ENST00000575135 NCR2O95944 276 aa10.45□□□□□ -0.74
TVP23A-209ENST00000575135 FGF6P10767 208 aa10.45□□□□□ -0.74
TVP23A-209ENST00000575135 FOXA3P55318 350 aaPredicted RBP10.45□□□□□ -0.74
TVP23A-209ENST00000575135 FOXI1Q12951 378 aa10.45□□□□□ -0.74
TVP23A-209ENST00000575135 A0A0J9YXV3 536 aa10.44□□□□□ -0.74
TVP23A-209ENST00000575135 H7C423 109 aa10.44□□□□□ -0.74
TVP23A-209ENST00000575135 APCSP02743 223 aa10.44□□□□□ -0.74
TVP23A-209ENST00000575135 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
TVP23A-209ENST00000575135 RPP21Q9H633 154 aaKnown RBP10.44□□□□□ -0.74
TVP23A-209ENST00000575135 XCL1P47992 114 aa10.43□□□□□ -0.74
TVP23A-209ENST00000575135 KRTAP10-8P60410 259 aa10.43□□□□□ -0.74
TVP23A-209ENST00000575135 LINC00526Q96FQ7 95 aa10.43□□□□□ -0.74
TVP23A-209ENST00000575135 SDHAF1A6NFY7 115 aa10.42□□□□□ -0.74
TVP23A-209ENST00000575135 BCL2P10415 239 aa10.42□□□□□ -0.74
TVP23A-209ENST00000575135 EIF5AL1Q6IS14 154 aaKnown RBP10.42□□□□□ -0.74
TVP23A-209ENST00000575135 SPINK6Q6UWN8 80 aa10.42□□□□□ -0.74
TVP23A-209ENST00000575135 OR5A1Q8NGJ0 315 aa10.42□□□□□ -0.74
TVP23A-209ENST00000575135 FAM231BA6NCW3 169 aa10.41□□□□□ -0.74
TVP23A-209ENST00000575135 K7EN84 100 aa10.41□□□□□ -0.74
TVP23A-209ENST00000575135 SMIM15Q7Z3B0 74 aa10.41□□□□□ -0.74
TVP23A-209ENST00000575135 OCC1Q8TAD7 63 aa10.41□□□□□ -0.74
TVP23A-209ENST00000575135 LINC00474Q9P2X8 69 aa10.41□□□□□ -0.74
TVP23A-209ENST00000575135 LINC00959A0A1B0GUT2 108 aa10.4□□□□□ -0.74
TVP23A-209ENST00000575135 CCL25O15444 150 aa10.4□□□□□ -0.74
TVP23A-209ENST00000575135 ZNF25P17030 456 aaPredicted RBP10.4□□□□□ -0.74
TVP23A-209ENST00000575135 TEX261Q6UWH6 196 aa10.4□□□□□ -0.74
TVP23A-209ENST00000575135 IGHV1-58A0A0C4DH39 117 aa10.39□□□□□ -0.75
TVP23A-209ENST00000575135 I3L3M4 83 aa10.39□□□□□ -0.75
TVP23A-209ENST00000575135 PMCHP20382 165 aa10.39□□□□□ -0.75
TVP23A-209ENST00000575135 SRSF9Q13242 221 aaKnown RBP eCLIP10.39□□□□□ -0.75
TVP23A-209ENST00000575135 REG3GQ6UW15 175 aa10.39□□□□□ -0.75
TVP23A-209ENST00000575135 TMEM101Q96IK0 257 aa10.39□□□□□ -0.75
TVP23A-209ENST00000575135 BTF3L4Q96K17 158 aa10.39□□□□□ -0.75
TVP23A-209ENST00000575135 CARD19Q96LW7 228 aa10.39□□□□□ -0.75
TVP23A-209ENST00000575135 PKIGQ9Y2B9 76 aa10.38□□□□□ -0.75
TVP23A-209ENST00000575135 GAS8-AS1O95177 125 aa10.37□□□□□ -0.75
TVP23A-209ENST00000575135 ESDP10768 282 aa10.37□□□□□ -0.75
TVP23A-209ENST00000575135 Q6ZRP5 223 aa10.37□□□□□ -0.75
TVP23A-209ENST00000575135 TRBV6-5A0A0K0K1A5 114 aa10.36□□□□□ -0.75
TVP23A-209ENST00000575135 TSHBP01222 138 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms