RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 IGLL5B9A064 214 aa11.6□□□□□ -0.55
SMPD3-212ENST00000574662 C12orf74Q32Q52 190 aa11.6□□□□□ -0.55
SMPD3-212ENST00000574662 ZNF479Q96JC4 524 aa11.6□□□□□ -0.55
SMPD3-212ENST00000574662 CLUHP3Q96NS8 147 aa11.6□□□□□ -0.55
SMPD3-212ENST00000574662 HERVK_113P61574 105 aa11.59□□□□□ -0.55
SMPD3-212ENST00000574662 SPINK13Q1W4C9 94 aa11.59□□□□□ -0.55
SMPD3-212ENST00000574662 TMEM141Q96I45 108 aa11.59□□□□□ -0.55
SMPD3-212ENST00000574662 PRSS29PA6NIE9 313 aa11.59□□□□□ -0.55
SMPD3-212ENST00000574662 IGHV4-30-4P0DP06 118 aa11.59□□□□□ -0.55
SMPD3-212ENST00000574662 LINC00315P59091 139 aa11.59□□□□□ -0.55
SMPD3-212ENST00000574662 TMEM238LA0A1B0GVL6 79 aa11.58□□□□□ -0.56
SMPD3-212ENST00000574662 A6NJY4 79 aa11.58□□□□□ -0.56
SMPD3-212ENST00000574662 VCYO14598 125 aa11.58□□□□□ -0.56
SMPD3-212ENST00000574662 SPRY2O43597 315 aa11.58□□□□□ -0.56
SMPD3-212ENST00000574662 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
SMPD3-212ENST00000574662 KIR2DL4Q99706 377 aa11.58□□□□□ -0.56
SMPD3-212ENST00000574662 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
SMPD3-212ENST00000574662 TRAV12-2A0A075B6T6 113 aa11.57□□□□□ -0.56
SMPD3-212ENST00000574662 POLR2KP53803 58 aaKnown RBP11.57□□□□□ -0.56
SMPD3-212ENST00000574662 SUMO4Q6EEV6 95 aa11.57□□□□□ -0.56
SMPD3-212ENST00000574662 SYT8Q8NBV8 401 aa11.57□□□□□ -0.56
SMPD3-212ENST00000574662 TIMM17AQ99595 171 aa11.57□□□□□ -0.56
SMPD3-212ENST00000574662 TRBV6-5A0A0K0K1A5 114 aa11.56□□□□□ -0.56
SMPD3-212ENST00000574662 F8W1H4 67 aa11.56□□□□□ -0.56
SMPD3-212ENST00000574662 RRN3P1Q2M238 152 aa11.56□□□□□ -0.56
SMPD3-212ENST00000574662 TP53TG1Q9Y2A0 90 aa11.56□□□□□ -0.56
SMPD3-212ENST00000574662 ZNF815PA8K554 130 aa11.56□□□□□ -0.56
SMPD3-212ENST00000574662 PMVKQ15126 192 aa11.56□□□□□ -0.56
SMPD3-212ENST00000574662 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
SMPD3-212ENST00000574662 C9orf85Q96MD7 179 aa11.56□□□□□ -0.56
SMPD3-212ENST00000574662 XCL2Q9UBD3 114 aa11.56□□□□□ -0.56
SMPD3-212ENST00000574662 K7EIL1 84 aa11.55□□□□□ -0.56
SMPD3-212ENST00000574662 TRAV12-3A0A0B4J271 114 aa11.54□□□□□ -0.56
SMPD3-212ENST00000574662 IGIPA6NJ69 53 aa11.54□□□□□ -0.56
SMPD3-212ENST00000574662 IGHV3-16A0A0C4DH30 117 aa11.54□□□□□ -0.56
SMPD3-212ENST00000574662 TRBV27A0A0K0K1C4 114 aa11.54□□□□□ -0.56
SMPD3-212ENST00000574662 RBMY1A1P0DJD3 496 aaKnown RBP11.54□□□□□ -0.56
SMPD3-212ENST00000574662 RBMY1CP0DJD4 496 aa11.54□□□□□ -0.56
SMPD3-212ENST00000574662 RBMY1FQ15415 496 aaKnown RBP11.54□□□□□ -0.56
SMPD3-212ENST00000574662 SCGB1D4Q6XE38 83 aa11.54□□□□□ -0.56
SMPD3-212ENST00000574662 IGLV4-69A0A075B6H9 119 aa11.53□□□□□ -0.56
SMPD3-212ENST00000574662 A8MZ25 164 aa11.53□□□□□ -0.56
SMPD3-212ENST00000574662 F5H697 171 aa11.53□□□□□ -0.56
SMPD3-212ENST00000574662 CRYGDP07320 174 aa11.53□□□□□ -0.56
SMPD3-212ENST00000574662 RHOHQ15669 191 aa11.53□□□□□ -0.56
SMPD3-212ENST00000574662 SDHAF1A6NFY7 115 aa11.52□□□□□ -0.57
SMPD3-212ENST00000574662 C11orf86A6NJI1 115 aa11.52□□□□□ -0.57
SMPD3-212ENST00000574662 J3QR89 54 aa11.52□□□□□ -0.57
SMPD3-212ENST00000574662 RPL24P83731 157 aaKnown RBP11.52□□□□□ -0.57
SMPD3-212ENST00000574662 MORN3Q6PF18 240 aaPredicted RBP11.52□□□□□ -0.57
SMPD3-212ENST00000574662 TSHBP01222 138 aa11.51□□□□□ -0.57
SMPD3-212ENST00000574662 CSNK1G2-AS1Q8NCQ2 148 aa11.51□□□□□ -0.57
SMPD3-212ENST00000574662 A0A087WWL8 130 aa11.51□□□□□ -0.57
SMPD3-212ENST00000574662 C1orf158Q8N1D5 194 aa11.51□□□□□ -0.57
SMPD3-212ENST00000574662 IGHV1OR15-1A0A075B7D0 117 aa11.5□□□□□ -0.57
SMPD3-212ENST00000574662 LYRM7Q5U5X0 104 aa11.5□□□□□ -0.57
SMPD3-212ENST00000574662 JPT2Q9H910 190 aa11.5□□□□□ -0.57
SMPD3-212ENST00000574662 SPANXB1Q9NS25 103 aaPredicted RBP11.5□□□□□ -0.57
SMPD3-212ENST00000574662 TRGV11A0A075B6L2 103 aa11.49□□□□□ -0.57
SMPD3-212ENST00000574662 TEX48A0A1B0GUV7 120 aa11.49□□□□□ -0.57
SMPD3-212ENST00000574662 PRM2P04554 102 aa11.49□□□□□ -0.57
SMPD3-212ENST00000574662 ZNF56Q15929 161 aa11.49□□□□□ -0.57
SMPD3-212ENST00000574662 KIR2DL5BQ8NHK3 375 aa11.49□□□□□ -0.57
SMPD3-212ENST00000574662 UBE2D1P51668 147 aa11.49□□□□□ -0.57
SMPD3-212ENST00000574662 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMPD3-212ENST00000574662 ZNF876PQ49A33 203 aa11.49□□□□□ -0.57
SMPD3-212ENST00000574662 DEFB121Q5J5C9 76 aa11.49□□□□□ -0.57
SMPD3-212ENST00000574662 NBEAL2Q6ZNJ1 2754 aa11.48□□□□□ -0.57
SMPD3-212ENST00000574662 INSP01308 110 aa11.48□□□□□ -0.57
SMPD3-212ENST00000574662 APOC4P55056 127 aa11.48□□□□□ -0.57
SMPD3-212ENST00000574662 GAGE13Q4V321 117 aa11.48□□□□□ -0.57
SMPD3-212ENST00000574662 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
SMPD3-212ENST00000574662 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
SMPD3-212ENST00000574662 MRPL16Q9NX20 251 aaKnown RBP11.48□□□□□ -0.57
SMPD3-212ENST00000574662 M0QY20 66 aa11.47□□□□□ -0.57
SMPD3-212ENST00000574662 RPL39P62891 51 aaKnown RBP11.47□□□□□ -0.57
SMPD3-212ENST00000574662 NFE4Q86UQ8 179 aa11.47□□□□□ -0.57
SMPD3-212ENST00000574662 C1QTNF4Q9BXJ3 329 aa11.47□□□□□ -0.57
SMPD3-212ENST00000574662 PGPEP1Q9NXJ5 209 aa11.47□□□□□ -0.57
SMPD3-212ENST00000574662 IGHV3OR16-12A0A075B7B8 117 aa11.46□□□□□ -0.57
SMPD3-212ENST00000574662 H3BMG7 143 aa11.46□□□□□ -0.57
SMPD3-212ENST00000574662 A0A0J9YY99 117 aa11.46□□□□□ -0.58
SMPD3-212ENST00000574662 LINC01587Q99440 93 aa11.46□□□□□ -0.58
SMPD3-212ENST00000574662 EDA2RQ9HAV5 297 aa11.46□□□□□ -0.58
SMPD3-212ENST00000574662 MDFICQ9P1T7 246 aa11.46□□□□□ -0.58
SMPD3-212ENST00000574662 MUC4Q99102 2169 aa11.45□□□□□ -0.58
SMPD3-212ENST00000574662 HTN1P15515 57 aa11.45□□□□□ -0.58
SMPD3-212ENST00000574662 WFDC2Q14508 124 aa11.45□□□□□ -0.58
SMPD3-212ENST00000574662 DEFB135Q30KP9 77 aa11.45□□□□□ -0.58
SMPD3-212ENST00000574662 TMEM170BQ5T4T1 132 aa11.45□□□□□ -0.58
SMPD3-212ENST00000574662 I3L3M4 83 aa11.44□□□□□ -0.58
SMPD3-212ENST00000574662 LGALS3P17931 250 aaKnown RBP11.44□□□□□ -0.58
SMPD3-212ENST00000574662 PRO0461Q9UI25 63 aa11.44□□□□□ -0.58
SMPD3-212ENST00000574662 AZU1P20160 251 aa11.44□□□□□ -0.58
SMPD3-212ENST00000574662 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
SMPD3-212ENST00000574662 J3QQQ9 107 aa11.43□□□□□ -0.58
SMPD3-212ENST00000574662 LEPROTO15243 131 aa11.43□□□□□ -0.58
SMPD3-212ENST00000574662 C20orf203Q8NBC4 194 aa11.43□□□□□ -0.58
SMPD3-212ENST00000574662 ATP6V0E2Q8NHE4 81 aa11.43□□□□□ -0.58
SMPD3-212ENST00000574662 MRAPQ8TCY5 172 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms