RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 RNF185Q96GF1 192 aa7.48□□□□□ -1.21
CHD3-216ENST00000573936 KRTAP1-5Q9BYS1 174 aa7.48□□□□□ -1.21
CHD3-216ENST00000573936 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 A0A087WX48 190 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 IGHV1-24A0A0C4DH33 117 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 IGHV3-30P01768 117 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 IGHV3-33P01772 117 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 IGHV3-30-3P0DP02 117 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 IGHV3-30-5P0DP03 117 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 COTL1Q14019 142 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 FAM104BQ5XKR9 115 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 NIT1Q86X76 327 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 LRP1BQ9NZR2 4599 aa7.47□□□□□ -1.21
CHD3-216ENST00000573936 IBA57-AS1B1ANH7 110 aa7.46□□□□□ -1.22
CHD3-216ENST00000573936 TMEM262E9PQX1 116 aa7.46□□□□□ -1.22
CHD3-216ENST00000573936 IQCJQ1A5X6 159 aa7.46□□□□□ -1.22
CHD3-216ENST00000573936 COX19Q49B96 90 aa7.46□□□□□ -1.22
CHD3-216ENST00000573936 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
CHD3-216ENST00000573936 GNB1LQ9BYB4 327 aa7.46□□□□□ -1.22
CHD3-216ENST00000573936 ST20Q9HBF5 79 aa7.46□□□□□ -1.22
CHD3-216ENST00000573936 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
CHD3-216ENST00000573936 NCR2O95944 276 aa7.45□□□□□ -1.22
CHD3-216ENST00000573936 HLA-DQA1P01909 254 aa7.45□□□□□ -1.22
CHD3-216ENST00000573936 PMCHP20382 165 aa7.45□□□□□ -1.22
CHD3-216ENST00000573936 LAGE3Q14657 143 aa7.45□□□□□ -1.22
CHD3-216ENST00000573936 MRPL51Q4U2R6 128 aaKnown RBP7.45□□□□□ -1.22
CHD3-216ENST00000573936 NTM-AS1Q6ZSK4 140 aa7.45□□□□□ -1.22
CHD3-216ENST00000573936 RPL39LQ96EH5 51 aaKnown RBP7.45□□□□□ -1.22
CHD3-216ENST00000573936 TRAV8-3A0A0A6YYJ7 113 aa7.44□□□□□ -1.22
CHD3-216ENST00000573936 I3L3M4 83 aa7.44□□□□□ -1.22
CHD3-216ENST00000573936 GAS8-AS1O95177 125 aa7.44□□□□□ -1.22
CHD3-216ENST00000573936 PPBPP02775 128 aa7.44□□□□□ -1.22
CHD3-216ENST00000573936 MT-ND6P03923 174 aa7.44□□□□□ -1.22
CHD3-216ENST00000573936 RAB5AP20339 215 aa7.44□□□□□ -1.22
CHD3-216ENST00000573936 CKS2P33552 79 aa7.44□□□□□ -1.22
CHD3-216ENST00000573936 TMEM243Q9BU79 118 aa7.44□□□□□ -1.22
CHD3-216ENST00000573936 MRPL18Q9H0U6 180 aaKnown RBP7.44□□□□□ -1.22
CHD3-216ENST00000573936 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
CHD3-216ENST00000573936 UBE2L6O14933 153 aa7.43□□□□□ -1.22
CHD3-216ENST00000573936 APCSP02743 223 aa7.43□□□□□ -1.22
CHD3-216ENST00000573936 RPS10P46783 165 aaKnown RBP7.43□□□□□ -1.22
CHD3-216ENST00000573936 AMTP48728 403 aa7.43□□□□□ -1.22
CHD3-216ENST00000573936 TRAPPC1Q9Y5R8 145 aa7.43□□□□□ -1.22
CHD3-216ENST00000573936 D6R8Y8 96 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 VCYO14598 125 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 POLR2KP53803 58 aaKnown RBP7.42□□□□□ -1.22
CHD3-216ENST00000573936 Q0VG73 95 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 FABP9Q0Z7S8 132 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 GAGE6Q13070 117 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 KIAA1644Q3SXP7 199 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 Q6ZRN7 208 aaPredicted RBP7.42□□□□□ -1.22
CHD3-216ENST00000573936 RMI2Q96E14 147 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 C20orf78Q9BR46 151 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 TMEM70Q9BUB7 260 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 TM2D2Q9BX73 214 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 KLK12Q9UKR0 248 aa7.42□□□□□ -1.22
CHD3-216ENST00000573936 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
CHD3-216ENST00000573936 TRBV27A0A0K0K1C4 114 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 A0A1B0GUV1 79 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 H7C423 109 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 PHOX2AO14813 284 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 EREGO14944 169 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 TCAPO15273 167 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 PSCAO43653 123 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
CHD3-216ENST00000573936 TNP2Q05952 138 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 ORMDL3Q8N138 153 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 Q8N3U1 123 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 NRACQ8N912 160 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 COX11Q9Y6N1 276 aa7.41□□□□□ -1.22
CHD3-216ENST00000573936 ANGP03950 147 aaKnown RBP7.4□□□□□ -1.22
CHD3-216ENST00000573936 TRGC2P03986 189 aa7.4□□□□□ -1.22
CHD3-216ENST00000573936 RBX1P62877 108 aa7.4□□□□□ -1.22
CHD3-216ENST00000573936 RPL32P62910 135 aaKnown RBP7.4□□□□□ -1.22
CHD3-216ENST00000573936 MPV17L2Q567V2 206 aa7.4□□□□□ -1.22
CHD3-216ENST00000573936 PRELID3AQ96N28 172 aa7.4□□□□□ -1.22
CHD3-216ENST00000573936 KIR2DL4Q99706 377 aa7.4□□□□□ -1.22
CHD3-216ENST00000573936 Q9HAA7 133 aa7.4□□□□□ -1.22
CHD3-216ENST00000573936 LAMTOR2Q9Y2Q5 125 aa7.4□□□□□ -1.22
CHD3-216ENST00000573936 DNAH5Q8TE73 4624 aa7.39□□□□□ -1.23
CHD3-216ENST00000573936 TNFRSF6BO95407 300 aa7.39□□□□□ -1.23
CHD3-216ENST00000573936 NPYP01303 97 aa7.39□□□□□ -1.23
CHD3-216ENST00000573936 CRPP02741 224 aa7.39□□□□□ -1.23
CHD3-216ENST00000573936 FCER1GP30273 86 aa7.39□□□□□ -1.23
CHD3-216ENST00000573936 MAPKAPK5-AS1Q8N8E1 139 aa7.39□□□□□ -1.23
CHD3-216ENST00000573936 DEFB104AQ8WTQ1 72 aa7.39□□□□□ -1.23
CHD3-216ENST00000573936 UBE2WQ96B02 151 aa7.39□□□□□ -1.23
CHD3-216ENST00000573936 ALKBH7Q9BT30 221 aaPredicted RBP7.39□□□□□ -1.23
CHD3-216ENST00000573936 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
CHD3-216ENST00000573936 TSHBP01222 138 aa7.38□□□□□ -1.23
CHD3-216ENST00000573936 SMAGPQ0VAQ4 97 aa7.38□□□□□ -1.23
CHD3-216ENST00000573936 AMMECR1LQ6DCA0 310 aa7.38□□□□□ -1.23
CHD3-216ENST00000573936 Q8N976 141 aa7.38□□□□□ -1.23
CHD3-216ENST00000573936 C16orf90A8MZG2 172 aa7.37□□□□□ -1.23
CHD3-216ENST00000573936 ESDP10768 282 aa7.37□□□□□ -1.23
CHD3-216ENST00000573936 ZNF25P17030 456 aaPredicted RBP7.37□□□□□ -1.23
CHD3-216ENST00000573936 MIAQ16674 131 aa7.37□□□□□ -1.23
CHD3-216ENST00000573936 TMEM18Q96B42 140 aa7.37□□□□□ -1.23
CHD3-216ENST00000573936 TMEM101Q96IK0 257 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms