RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 NAT8BQ9UHF3 227 aa18.33■□□□□ 0.52
SCARF1-207ENST00000573867 RAB4AP20338 218 aa18.32■□□□□ 0.52
SCARF1-207ENST00000573867 RIGQ13278 110 aa18.32■□□□□ 0.52
SCARF1-207ENST00000573867 COTL1Q14019 142 aa18.32■□□□□ 0.52
SCARF1-207ENST00000573867 CLLU1Q5K131 121 aa18.32■□□□□ 0.52
SCARF1-207ENST00000573867 COX11Q9Y6N1 276 aa18.32■□□□□ 0.52
SCARF1-207ENST00000573867 Q0VG73 95 aa18.31■□□□□ 0.52
SCARF1-207ENST00000573867 CLPSL2Q6UWE3 100 aa18.31■□□□□ 0.52
SCARF1-207ENST00000573867 PRR34Q9NV39 138 aa18.31■□□□□ 0.52
SCARF1-207ENST00000573867 DNAH8Q96JB1 4490 aa18.31■□□□□ 0.52
SCARF1-207ENST00000573867 SDHAF1A6NFY7 115 aa18.3■□□□□ 0.52
SCARF1-207ENST00000573867 RPS10P46783 165 aaKnown RBP18.3■□□□□ 0.52
SCARF1-207ENST00000573867 AMTP48728 403 aa18.3■□□□□ 0.52
SCARF1-207ENST00000573867 C20orf203Q8NBC4 194 aa18.3■□□□□ 0.52
SCARF1-207ENST00000573867 IGLV4-60A0A075B6I1 120 aa18.29■□□□□ 0.52
SCARF1-207ENST00000573867 IGLV5-52A0A0A0MRZ9 124 aa18.29■□□□□ 0.52
SCARF1-207ENST00000573867 TRBV6-5A0A0K0K1A5 114 aa18.29■□□□□ 0.52
SCARF1-207ENST00000573867 CRPP02741 224 aa18.29■□□□□ 0.52
SCARF1-207ENST00000573867 LINC00269Q8N2A0 174 aa18.29■□□□□ 0.52
SCARF1-207ENST00000573867 NTN5Q8WTR8 489 aaPredicted RBP18.29■□□□□ 0.52
SCARF1-207ENST00000573867 SMKR1H3BMG3 65 aa18.27■□□□□ 0.52
SCARF1-207ENST00000573867 GCSHP23434 173 aa18.27■□□□□ 0.52
SCARF1-207ENST00000573867 C1orf43Q9BWL3 253 aa18.27■□□□□ 0.52
SCARF1-207ENST00000573867 KRTAP4-5Q9BYR2 181 aa18.27■□□□□ 0.52
SCARF1-207ENST00000573867 MRAP2Q96G30 205 aa18.26■□□□□ 0.51
SCARF1-207ENST00000573867 A0A1B0GUV1 79 aa18.25■□□□□ 0.51
SCARF1-207ENST00000573867 NCR2O95944 276 aa18.25■□□□□ 0.51
SCARF1-207ENST00000573867 KRTAP26-1Q6PEX3 210 aa18.25■□□□□ 0.51
SCARF1-207ENST00000573867 MIAQ16674 131 aa18.24■□□□□ 0.51
SCARF1-207ENST00000573867 TMEM70Q9BUB7 260 aa18.24■□□□□ 0.51
SCARF1-207ENST00000573867 PCLOQ9Y6V0 5065 aa18.24■□□□□ 0.51
SCARF1-207ENST00000573867 ABCA13Q86UQ4 5058 aa18.23■□□□□ 0.51
SCARF1-207ENST00000573867 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.23■□□□□ 0.51
SCARF1-207ENST00000573867 CAMPP49913 170 aa18.23■□□□□ 0.51
SCARF1-207ENST00000573867 XGP55808 180 aa18.23■□□□□ 0.51
SCARF1-207ENST00000573867 ST20Q9HBF5 79 aa18.23■□□□□ 0.51
SCARF1-207ENST00000573867 UBE2L6O14933 153 aa18.22■□□□□ 0.51
SCARF1-207ENST00000573867 POLR2KP53803 58 aaKnown RBP18.22■□□□□ 0.51
SCARF1-207ENST00000573867 REG3AQ06141 175 aa18.22■□□□□ 0.51
SCARF1-207ENST00000573867 NRACQ8N912 160 aa18.22■□□□□ 0.51
SCARF1-207ENST00000573867 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-207ENST00000573867 A0A1B0GXF2 115 aa18.21■□□□□ 0.51
SCARF1-207ENST00000573867 IGKV2-29A2NJV5 120 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-207ENST00000573867 I3L3M4 83 aa18.21■□□□□ 0.51
SCARF1-207ENST00000573867 TSHBP01222 138 aa18.21■□□□□ 0.51
SCARF1-207ENST00000573867 MRPL51Q4U2R6 128 aaKnown RBP18.21■□□□□ 0.51
SCARF1-207ENST00000573867 FAM104BQ5XKR9 115 aa18.21■□□□□ 0.51
SCARF1-207ENST00000573867 MRPL54Q6P161 138 aaKnown RBP18.21■□□□□ 0.51
SCARF1-207ENST00000573867 FAT1Q14517 4588 aa18.2■□□□□ 0.5
SCARF1-207ENST00000573867 APCSP02743 223 aa18.2■□□□□ 0.5
SCARF1-207ENST00000573867 PMCHP20382 165 aa18.2■□□□□ 0.5
SCARF1-207ENST00000573867 TMEM242Q9NWH2 141 aa18.2■□□□□ 0.5
SCARF1-207ENST00000573867 IGLV10-54A0A075B6I4 117 aa18.18■□□□□ 0.5
SCARF1-207ENST00000573867 HLA-DQA1P01909 254 aa18.18■□□□□ 0.5
SCARF1-207ENST00000573867 PNRC1Q12796 327 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-207ENST00000573867 TRBV27A0A0K0K1C4 114 aa18.17■□□□□ 0.5
SCARF1-207ENST00000573867 A0A1B0GW15 77 aa18.17■□□□□ 0.5
SCARF1-207ENST00000573867 ESDP10768 282 aa18.17■□□□□ 0.5
SCARF1-207ENST00000573867 ADCYAP1P18509 176 aa18.16■□□□□ 0.5
SCARF1-207ENST00000573867 HBBP68871 147 aa18.16■□□□□ 0.5
SCARF1-207ENST00000573867 PPP1R2P9O14990 202 aa18.15■□□□□ 0.5
SCARF1-207ENST00000573867 FAM30AQ9NZY2 134 aa18.15■□□□□ 0.5
SCARF1-207ENST00000573867 USP17L23D6RBM5 183 aa18.14■□□□□ 0.49
SCARF1-207ENST00000573867 FGF6P10767 208 aa18.14■□□□□ 0.49
SCARF1-207ENST00000573867 HAMPP81172 84 aa18.14■□□□□ 0.49
SCARF1-207ENST00000573867 LINC01620Q4KN68 170 aa18.14■□□□□ 0.49
SCARF1-207ENST00000573867 Q8N1X5 172 aa18.13■□□□□ 0.49
SCARF1-207ENST00000573867 H7C423 109 aa18.12■□□□□ 0.49
SCARF1-207ENST00000573867 SUMO2P61956 95 aaKnown RBP18.12■□□□□ 0.49
SCARF1-207ENST00000573867 RNASEKQ6P5S7 137 aaKnown RBP18.12■□□□□ 0.49
SCARF1-207ENST00000573867 TRAV8-4A0A0B4J246 113 aa18.11■□□□□ 0.49
SCARF1-207ENST00000573867 AMMECR1LQ6DCA0 310 aa18.11■□□□□ 0.49
SCARF1-207ENST00000573867 UQCC3Q6UW78 93 aa18.11■□□□□ 0.49
SCARF1-207ENST00000573867 TMEM218A2RU14 115 aa18.1■□□□□ 0.49
SCARF1-207ENST00000573867 MT-ND4LP03901 98 aa18.1■□□□□ 0.49
SCARF1-207ENST00000573867 ANAPC16Q96DE5 110 aa18.1■□□□□ 0.49
SCARF1-207ENST00000573867 LINC00862A6NCI5 91 aa18.09■□□□□ 0.49
SCARF1-207ENST00000573867 VCYO14598 125 aa18.09■□□□□ 0.49
SCARF1-207ENST00000573867 PPP1R17O96001 155 aa18.09■□□□□ 0.49
SCARF1-207ENST00000573867 S100A8P05109 93 aa18.09■□□□□ 0.49
SCARF1-207ENST00000573867 CKS2P33552 79 aa18.09■□□□□ 0.49
SCARF1-207ENST00000573867 ATP5L2Q7Z4Y8 100 aa18.09■□□□□ 0.49
SCARF1-207ENST00000573867 IGKV3OR2-268A0A0C4DH90 116 aa18.08■□□□□ 0.48
SCARF1-207ENST00000573867 D6R8Y8 96 aa18.08■□□□□ 0.48
SCARF1-207ENST00000573867 PRSS1P07477 247 aa18.08■□□□□ 0.48
SCARF1-207ENST00000573867 TRBV24-1A0A075B6N3 115 aa18.07■□□□□ 0.48
SCARF1-207ENST00000573867 F8W036 122 aa18.07■□□□□ 0.48
SCARF1-207ENST00000573867 C14orf177Q52M58 125 aa18.07■□□□□ 0.48
SCARF1-207ENST00000573867 TNFRSF6BO95407 300 aa18.06■□□□□ 0.48
SCARF1-207ENST00000573867 ZNF25P17030 456 aaPredicted RBP18.06■□□□□ 0.48
SCARF1-207ENST00000573867 Q6ZSA8 131 aa18.06■□□□□ 0.48
SCARF1-207ENST00000573867 C7orf77A4D0Y5 90 aa18.05■□□□□ 0.48
SCARF1-207ENST00000573867 NPYP01303 97 aa18.05■□□□□ 0.48
SCARF1-207ENST00000573867 C20orf78Q9BR46 151 aa18.05■□□□□ 0.48
SCARF1-207ENST00000573867 MRPL52Q86TS9 123 aaKnown RBP18.04■□□□□ 0.48
SCARF1-207ENST00000573867 COMMD7Q86VX2 200 aa18.04■□□□□ 0.48
SCARF1-207ENST00000573867 FCER1GP30273 86 aa18.03■□□□□ 0.48
SCARF1-207ENST00000573867 RPL32P62910 135 aaKnown RBP18.03■□□□□ 0.48
SCARF1-207ENST00000573867 GAGE12HA6NDE8 117 aa18.02■□□□□ 0.48
SCARF1-207ENST00000573867 OR5A1Q8NGJ0 315 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms