RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 TRAV1-1A0A0B4J248 108 aa13.9□□□□□ -0.18
SNF8-216ENST00000573795 LYZL1Q6UWQ5 148 aa13.9□□□□□ -0.18
SNF8-216ENST00000573795 DPH3P1Q9H4G8 78 aa13.9□□□□□ -0.18
SNF8-216ENST00000573795 AP5S1Q9NUS5 200 aa13.9□□□□□ -0.18
SNF8-216ENST00000573795 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.89□□□□□ -0.19
SNF8-216ENST00000573795 PLAC8Q9NZF1 115 aa13.89□□□□□ -0.19
SNF8-216ENST00000573795 F2Z2F3 143 aa13.88□□□□□ -0.19
SNF8-216ENST00000573795 TRGC1P0CF51 173 aa13.88□□□□□ -0.19
SNF8-216ENST00000573795 NTF3P20783 257 aa13.88□□□□□ -0.19
SNF8-216ENST00000573795 SMIM12Q96EX1 92 aa13.88□□□□□ -0.19
SNF8-216ENST00000573795 AMTP48728 403 aa13.87□□□□□ -0.19
SNF8-216ENST00000573795 GNG4P50150 75 aa13.87□□□□□ -0.19
SNF8-216ENST00000573795 GAGE12HA6NDE8 117 aa13.86□□□□□ -0.19
SNF8-216ENST00000573795 PHOX2AO14813 284 aa13.86□□□□□ -0.19
SNF8-216ENST00000573795 UBE2L6O14933 153 aa13.86□□□□□ -0.19
SNF8-216ENST00000573795 CTRLP40313 264 aa13.86□□□□□ -0.19
SNF8-216ENST00000573795 EIF5AP63241 154 aaKnown RBP13.86□□□□□ -0.19
SNF8-216ENST00000573795 COTL1Q14019 142 aa13.86□□□□□ -0.19
SNF8-216ENST00000573795 WDR73Q6P4I2 378 aa13.86□□□□□ -0.19
SNF8-216ENST00000573795 DPH3Q96FX2 82 aa13.86□□□□□ -0.19
SNF8-216ENST00000573795 XKRY2A2RUG3 117 aa13.85□□□□□ -0.19
SNF8-216ENST00000573795 IFNA1P01562 189 aa13.85□□□□□ -0.19
SNF8-216ENST00000573795 SULT1A2P50226 295 aa13.85□□□□□ -0.19
SNF8-216ENST00000573795 C9orf62Q8N4C0 152 aa13.85□□□□□ -0.19
SNF8-216ENST00000573795 MEF2BQ02080 365 aaPredicted RBP13.84□□□□□ -0.19
SNF8-216ENST00000573795 COX6A2Q02221 97 aa13.84□□□□□ -0.19
SNF8-216ENST00000573795 GATD1Q8NB37 220 aa13.84□□□□□ -0.19
SNF8-216ENST00000573795 CNFNQ9BYD5 112 aa13.84□□□□□ -0.19
SNF8-216ENST00000573795 HIGD2BQ4VC39 106 aa13.83□□□□□ -0.2
SNF8-216ENST00000573795 PRSS3P2Q8NHM4 247 aa13.83□□□□□ -0.2
SNF8-216ENST00000573795 TRAV26-2A0A0B4J265 109 aa13.82□□□□□ -0.2
SNF8-216ENST00000573795 IGKV3OR2-268A0A0C4DH90 116 aa13.82□□□□□ -0.2
SNF8-216ENST00000573795 Q6ZNX1 250 aa13.82□□□□□ -0.2
SNF8-216ENST00000573795 NUDT10Q8NFP7 164 aa13.82□□□□□ -0.2
SNF8-216ENST00000573795 NUDT11Q96G61 164 aa13.82□□□□□ -0.2
SNF8-216ENST00000573795 PDE6DO43924 150 aa13.81□□□□□ -0.2
SNF8-216ENST00000573795 RPS10P46783 165 aaKnown RBP13.81□□□□□ -0.2
SNF8-216ENST00000573795 MED9Q9NWA0 146 aa13.81□□□□□ -0.2
SNF8-216ENST00000573795 CFAP161Q6P656 301 aa13.8□□□□□ -0.2
SNF8-216ENST00000573795 CHCHD10Q8WYQ3 142 aaPredicted RBP13.8□□□□□ -0.2
SNF8-216ENST00000573795 RPL39LQ96EH5 51 aaKnown RBP13.8□□□□□ -0.2
SNF8-216ENST00000573795 GVQW2A0A096LPI5 108 aaPredicted RBP13.79□□□□□ -0.2
SNF8-216ENST00000573795 NDUFS6O75380 124 aaKnown RBP13.79□□□□□ -0.2
SNF8-216ENST00000573795 TWIST1Q15672 202 aa13.79□□□□□ -0.2
SNF8-216ENST00000573795 MAJINQ3KP22 176 aa13.79□□□□□ -0.2
SNF8-216ENST00000573795 C7orf33Q8WU49 177 aa13.79□□□□□ -0.2
SNF8-216ENST00000573795 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.78□□□□□ -0.2
SNF8-216ENST00000573795 IGKV2-24A0A0C4DH68 120 aa13.78□□□□□ -0.2
SNF8-216ENST00000573795 IGKV2-29A2NJV5 120 aaPredicted RBP13.78□□□□□ -0.2
SNF8-216ENST00000573795 BCL2P10415 239 aa13.78□□□□□ -0.2
SNF8-216ENST00000573795 PRR3P79522 188 aaKnown RBP13.78□□□□□ -0.2
SNF8-216ENST00000573795 BIN3Q9NQY0 253 aa13.78□□□□□ -0.2
SNF8-216ENST00000573795 K7EN84 100 aa13.77□□□□□ -0.21
SNF8-216ENST00000573795 FOXA3P55318 350 aaPredicted RBP13.77□□□□□ -0.21
SNF8-216ENST00000573795 ODF1Q14990 250 aa13.77□□□□□ -0.21
SNF8-216ENST00000573795 RNASE7Q9H1E1 156 aaKnown RBP13.77□□□□□ -0.21
SNF8-216ENST00000573795 RPP21Q9H633 154 aaKnown RBP13.77□□□□□ -0.21
SNF8-216ENST00000573795 A0A096LNI7 61 aa13.76□□□□□ -0.21
SNF8-216ENST00000573795 TEX46H3BTG2 121 aa13.76□□□□□ -0.21
SNF8-216ENST00000573795 FOXI1Q12951 378 aa13.76□□□□□ -0.21
SNF8-216ENST00000573795 GTSF1Q8WW33 167 aa13.76□□□□□ -0.21
SNF8-216ENST00000573795 LINC01600Q96MT4 127 aa13.76□□□□□ -0.21
SNF8-216ENST00000573795 NCR2O95944 276 aa13.75□□□□□ -0.21
SNF8-216ENST00000573795 AMMECR1LQ6DCA0 310 aa13.75□□□□□ -0.21
SNF8-216ENST00000573795 STPG4Q8N801 248 aa13.75□□□□□ -0.21
SNF8-216ENST00000573795 FGF6P10767 208 aa13.74□□□□□ -0.21
SNF8-216ENST00000573795 RNASEKQ6P5S7 137 aaKnown RBP13.74□□□□□ -0.21
SNF8-216ENST00000573795 H7C423 109 aa13.73□□□□□ -0.21
SNF8-216ENST00000573795 APCSP02743 223 aa13.73□□□□□ -0.21
SNF8-216ENST00000573795 EIF5AL1Q6IS14 154 aaKnown RBP13.73□□□□□ -0.21
SNF8-216ENST00000573795 LYPD6BQ8NI32 183 aa13.73□□□□□ -0.21
SNF8-216ENST00000573795 OCC1Q8TAD7 63 aa13.73□□□□□ -0.21
SNF8-216ENST00000573795 FAM231BA6NCW3 169 aa13.72□□□□□ -0.21
SNF8-216ENST00000573795 SDHAF1A6NFY7 115 aa13.72□□□□□ -0.21
SNF8-216ENST00000573795 OR5A1Q8NGJ0 315 aa13.71□□□□□ -0.21
SNF8-216ENST00000573795 LINC00526Q96FQ7 95 aa13.7□□□□□ -0.22
SNF8-216ENST00000573795 GAS8-AS1O95177 125 aa13.69□□□□□ -0.22
SNF8-216ENST00000573795 XCL1P47992 114 aa13.69□□□□□ -0.22
SNF8-216ENST00000573795 TRBV6-5A0A0K0K1A5 114 aa13.68□□□□□ -0.22
SNF8-216ENST00000573795 ESDP10768 282 aa13.68□□□□□ -0.22
SNF8-216ENST00000573795 ZNF25P17030 456 aaPredicted RBP13.68□□□□□ -0.22
SNF8-216ENST00000573795 A0A0J9YXV3 536 aa13.67□□□□□ -0.22
SNF8-216ENST00000573795 LINC00959A0A1B0GUT2 108 aa13.67□□□□□ -0.22
SNF8-216ENST00000573795 CCL25O15444 150 aa13.67□□□□□ -0.22
SNF8-216ENST00000573795 TEX261Q6UWH6 196 aa13.67□□□□□ -0.22
SNF8-216ENST00000573795 I3L3M4 83 aa13.66□□□□□ -0.22
SNF8-216ENST00000573795 TSHBP01222 138 aa13.66□□□□□ -0.22
SNF8-216ENST00000573795 TAGLN2P37802 199 aaKnown RBP13.66□□□□□ -0.22
SNF8-216ENST00000573795 KRTAP10-8P60410 259 aa13.66□□□□□ -0.22
SNF8-216ENST00000573795 SMIM15Q7Z3B0 74 aa13.66□□□□□ -0.22
SNF8-216ENST00000573795 IGHV1-58A0A0C4DH39 117 aa13.65□□□□□ -0.22
SNF8-216ENST00000573795 CARD19Q96LW7 228 aa13.65□□□□□ -0.22
SNF8-216ENST00000573795 PMCHP20382 165 aa13.64□□□□□ -0.23
SNF8-216ENST00000573795 SRSF9Q13242 221 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNF8-216ENST00000573795 SPINK6Q6UWN8 80 aa13.64□□□□□ -0.23
SNF8-216ENST00000573795 SLC51BQ86UW2 128 aa13.64□□□□□ -0.23
SNF8-216ENST00000573795 TMEM242Q9NWH2 141 aa13.64□□□□□ -0.23
SNF8-216ENST00000573795 LINC00474Q9P2X8 69 aa13.64□□□□□ -0.23
SNF8-216ENST00000573795 GATCO43716 136 aaKnown RBP13.63□□□□□ -0.23
SNF8-216ENST00000573795 FAM231DQ6ZW35 169 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms