RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SDHAF1A6NFY7 115 aa9.18□□□□□ -0.94
RPAIN-213ENST00000573577 MRPL51Q4U2R6 128 aaKnown RBP9.18□□□□□ -0.94
RPAIN-213ENST00000573577 A0A087WX48 190 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 PPBPP02775 128 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 CKS2P33552 79 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 IQCJQ1A5X6 159 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 NFE4Q86UQ8 179 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 NIT1Q86X76 327 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 CHCHD5Q9BSY4 110 aa9.17□□□□□ -0.94
RPAIN-213ENST00000573577 TMEM262E9PQX1 116 aa9.16□□□□□ -0.94
RPAIN-213ENST00000573577 I3L3M4 83 aa9.16□□□□□ -0.94
RPAIN-213ENST00000573577 NCR2O95944 276 aa9.16□□□□□ -0.94
RPAIN-213ENST00000573577 ELOBQ15370 118 aa9.16□□□□□ -0.94
RPAIN-213ENST00000573577 NTM-AS1Q6ZSK4 140 aa9.16□□□□□ -0.94
RPAIN-213ENST00000573577 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
RPAIN-213ENST00000573577 PKHD1P08F94 4074 aa9.15□□□□□ -0.94
RPAIN-213ENST00000573577 PKD1P98161 4303 aa9.15□□□□□ -0.94
RPAIN-213ENST00000573577 SMKR1H3BMG3 65 aa9.15□□□□□ -0.94
RPAIN-213ENST00000573577 PMCHP20382 165 aa9.15□□□□□ -0.94
RPAIN-213ENST00000573577 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.94
RPAIN-213ENST00000573577 LAGE3Q14657 143 aa9.15□□□□□ -0.94
RPAIN-213ENST00000573577 TMEM243Q9BU79 118 aa9.15□□□□□ -0.94
RPAIN-213ENST00000573577 TMEM70Q9BUB7 260 aa9.15□□□□□ -0.94
RPAIN-213ENST00000573577 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
RPAIN-213ENST00000573577 D6R8Y8 96 aa9.14□□□□□ -0.95
RPAIN-213ENST00000573577 UBE2L6O14933 153 aa9.14□□□□□ -0.95
RPAIN-213ENST00000573577 GAS8-AS1O95177 125 aa9.14□□□□□ -0.95
RPAIN-213ENST00000573577 APCSP02743 223 aa9.14□□□□□ -0.95
RPAIN-213ENST00000573577 AMTP48728 403 aa9.14□□□□□ -0.95
RPAIN-213ENST00000573577 SUMO2P61956 95 aaKnown RBP9.14□□□□□ -0.95
RPAIN-213ENST00000573577 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
RPAIN-213ENST00000573577 NRACQ8N912 160 aa9.14□□□□□ -0.95
RPAIN-213ENST00000573577 C20orf78Q9BR46 151 aa9.14□□□□□ -0.95
RPAIN-213ENST00000573577 TRBV24-1A0A075B6N3 115 aa9.13□□□□□ -0.95
RPAIN-213ENST00000573577 TRBV27A0A0K0K1C4 114 aa9.13□□□□□ -0.95
RPAIN-213ENST00000573577 VCYO14598 125 aa9.13□□□□□ -0.95
RPAIN-213ENST00000573577 PHOX2AO14813 284 aa9.13□□□□□ -0.95
RPAIN-213ENST00000573577 POLR2KP53803 58 aaKnown RBP9.13□□□□□ -0.95
RPAIN-213ENST00000573577 COX19Q49B96 90 aa9.13□□□□□ -0.95
RPAIN-213ENST00000573577 SLC7A5P1Q8MH63 180 aa9.13□□□□□ -0.95
RPAIN-213ENST00000573577 TRAV8-3A0A0A6YYJ7 113 aa9.12□□□□□ -0.95
RPAIN-213ENST00000573577 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
RPAIN-213ENST00000573577 GAGE6Q13070 117 aa9.12□□□□□ -0.95
RPAIN-213ENST00000573577 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
RPAIN-213ENST00000573577 TMEM136Q6ZRR5 245 aa9.12□□□□□ -0.95
RPAIN-213ENST00000573577 Q8N3U1 123 aa9.12□□□□□ -0.95
RPAIN-213ENST00000573577 KIR2DL4Q99706 377 aa9.12□□□□□ -0.95
RPAIN-213ENST00000573577 LAMTOR2Q9Y2Q5 125 aa9.12□□□□□ -0.95
RPAIN-213ENST00000573577 KIAA1109Q2LD37 5005 aa9.12□□□□□ -0.95
RPAIN-213ENST00000573577 H7C423 109 aa9.11□□□□□ -0.95
RPAIN-213ENST00000573577 TCAPO15273 167 aa9.11□□□□□ -0.95
RPAIN-213ENST00000573577 HLA-DQA1P01909 254 aa9.11□□□□□ -0.95
RPAIN-213ENST00000573577 RPL32P62910 135 aaKnown RBP9.11□□□□□ -0.95
RPAIN-213ENST00000573577 MPV17L2Q567V2 206 aa9.11□□□□□ -0.95
RPAIN-213ENST00000573577 ATRAIDQ6UW56 229 aa9.11□□□□□ -0.95
RPAIN-213ENST00000573577 PRELID3AQ96N28 172 aa9.11□□□□□ -0.95
RPAIN-213ENST00000573577 KLK12Q9UKR0 248 aa9.11□□□□□ -0.95
RPAIN-213ENST00000573577 FCER1GP30273 86 aa9.1□□□□□ -0.95
RPAIN-213ENST00000573577 Q0VG73 95 aa9.1□□□□□ -0.95
RPAIN-213ENST00000573577 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
RPAIN-213ENST00000573577 RMI2Q96E14 147 aa9.1□□□□□ -0.95
RPAIN-213ENST00000573577 GNB1LQ9BYB4 327 aa9.1□□□□□ -0.95
RPAIN-213ENST00000573577 HERC2O95714 4834 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 A0A1B0GUV1 79 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 TSHBP01222 138 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 NPYP01303 97 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 CRPP02741 224 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 MT-ND6P03923 174 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 ANGP03950 147 aaKnown RBP9.09□□□□□ -0.95
RPAIN-213ENST00000573577 RBX1P62877 108 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 Q9HAA7 133 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 COX11Q9Y6N1 276 aa9.09□□□□□ -0.95
RPAIN-213ENST00000573577 PSCAO43653 123 aa9.08□□□□□ -0.96
RPAIN-213ENST00000573577 SMAGPQ0VAQ4 97 aa9.08□□□□□ -0.96
RPAIN-213ENST00000573577 AMMECR1LQ6DCA0 310 aa9.08□□□□□ -0.96
RPAIN-213ENST00000573577 Q8N976 141 aa9.08□□□□□ -0.96
RPAIN-213ENST00000573577 UBE2WQ96B02 151 aa9.08□□□□□ -0.96
RPAIN-213ENST00000573577 SMIM2Q9BVW6 85 aa9.08□□□□□ -0.96
RPAIN-213ENST00000573577 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
RPAIN-213ENST00000573577 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-213ENST00000573577 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-213ENST00000573577 ESDP10768 282 aa9.06□□□□□ -0.96
RPAIN-213ENST00000573577 ZNF25P17030 456 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-213ENST00000573577 RNASEKQ6P5S7 137 aaKnown RBP9.06□□□□□ -0.96
RPAIN-213ENST00000573577 SPATA12Q7Z6I5 190 aa9.06□□□□□ -0.96
RPAIN-213ENST00000573577 TMEM18Q96B42 140 aa9.06□□□□□ -0.96
RPAIN-213ENST00000573577 IGKV2D-24A0A075B6R9 120 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 TGIF2-C20orf24A0A0A6YYL0 155 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 PRSS47A8MTI9 375 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 C16orf90A8MZG2 172 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 FGF6P10767 208 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 RAB5AP20339 215 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 MIAQ16674 131 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 LINC00269Q8N2A0 174 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 TMEM101Q96IK0 257 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms