RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 IGHV3-21A0A0B4J1V1 117 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 A0A0J9YX75 114 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 I3L3M4 83 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 SMIM2Q9BVW6 85 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 NDUFC1O43677 76 aa7.82□□□□□ -1.16
CHRNB1-205ENST00000573209 COX8CQ7Z4L0 72 aa7.82□□□□□ -1.16
CHRNB1-205ENST00000573209 DNAL4O96015 105 aa7.82□□□□□ -1.16
CHRNB1-205ENST00000573209 IGKV1-17P01599 117 aa7.82□□□□□ -1.16
CHRNB1-205ENST00000573209 APELAP0DMC3 54 aa7.82□□□□□ -1.16
CHRNB1-205ENST00000573209 PDE6HQ13956 83 aa7.82□□□□□ -1.16
CHRNB1-205ENST00000573209 IGLV4-69A0A075B6H9 119 aa7.81□□□□□ -1.16
CHRNB1-205ENST00000573209 IGHV1-58A0A0C4DH39 117 aa7.81□□□□□ -1.16
CHRNB1-205ENST00000573209 C8orf49Q96NF6 230 aa7.81□□□□□ -1.16
CHRNB1-205ENST00000573209 E7EQL1 145 aa7.81□□□□□ -1.16
CHRNB1-205ENST00000573209 K7EIM0 57 aa7.8□□□□□ -1.16
CHRNB1-205ENST00000573209 LEPROTO15243 131 aa7.8□□□□□ -1.16
CHRNB1-205ENST00000573209 MSRB1Q9NZV6 116 aa7.8□□□□□ -1.16
CHRNB1-205ENST00000573209 ATRXP46100 2492 aa7.8□□□□□ -1.16
CHRNB1-205ENST00000573209 PTPRQQ9UMZ3 2332 aa7.8□□□□□ -1.16
CHRNB1-205ENST00000573209 ATP5EP2Q5VTU8 51 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 C2orf66Q6UXQ4 117 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 KLK15Q9H2R5 256 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 RBM12B-AS1Q9P1G2 102 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 CSMD1Q96PZ7 3565 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 CACNA1BQ00975 2339 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 NXPH4O95158 308 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 C11orf45Q8TAV5 145 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 SVEP1Q4LDE5 3571 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 POLEQ07864 2286 aa7.79□□□□□ -1.16
CHRNB1-205ENST00000573209 EGR2P11161 476 aaPredicted RBP7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 DAD1P61803 113 aa7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 UBE2E2Q96LR5 201 aa7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 COL12A1Q99715 3063 aa7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 PKDREJQ9NTG1 2253 aa7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 TRAV7A0A075B6U4 112 aa7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 IGHV1-69DA0A0B4J2H0 117 aa7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 Q8NA96 180 aa7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 TLN1Q9Y490 2541 aaKnown RBP7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 CHD6Q8TD26 2715 aa7.78□□□□□ -1.16
CHRNB1-205ENST00000573209 NACAE9PAV3 2078 aa7.77□□□□□ -1.16
CHRNB1-205ENST00000573209 IBA57-AS1B1ANH7 110 aa7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 COX7A2LO14548 114 aa7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 COX7A1P24310 79 aa7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 NPBQ8NG41 125 aa7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 ASH1LQ9NR48 2969 aaKnown RBP7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 TRAV13-2A0A0B4J235 113 aa7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 APOC4P55056 127 aa7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 S100A7L2Q5SY68 101 aa7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 LY6G5BQ8NDX9 201 aa7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 TM2D3Q9BRN9 247 aa7.77□□□□□ -1.17
CHRNB1-205ENST00000573209 M0R1W7 72 aa7.76□□□□□ -1.17
CHRNB1-205ENST00000573209 BAALC-AS2P0C853 105 aa7.76□□□□□ -1.17
CHRNB1-205ENST00000573209 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
CHRNB1-205ENST00000573209 NBASA2RRP1 2371 aa7.76□□□□□ -1.17
CHRNB1-205ENST00000573209 F8WEM9 126 aa7.76□□□□□ -1.17
CHRNB1-205ENST00000573209 H3BS24 57 aa7.76□□□□□ -1.17
CHRNB1-205ENST00000573209 IGSF10Q6WRI0 2623 aa7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 IGLV11-55A0A075B6I3 123 aa7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 IGIPA6NJ69 53 aa7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 IGF1P05019 195 aa7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 GRNP28799 593 aaKnown RBP7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 KTN1-AS1Q86SY8 53 aa7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 TMEM61Q8N0U2 210 aa7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 DPM3Q9P2X0 92 aa7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 HOXD3P31249 432 aaPredicted RBP7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 CCDC140Q96MF4 163 aa7.75□□□□□ -1.17
CHRNB1-205ENST00000573209 A0A0J9YXY3 114 aa7.74□□□□□ -1.17
CHRNB1-205ENST00000573209 Q8N2B8 174 aa7.74□□□□□ -1.17
CHRNB1-205ENST00000573209 SUMO2P61956 95 aaKnown RBP7.74□□□□□ -1.17
CHRNB1-205ENST00000573209 ADAMTSL4-AS1Q5T5F5 129 aa7.74□□□□□ -1.17
CHRNB1-205ENST00000573209 C6orf223Q8N319 242 aa7.74□□□□□ -1.17
CHRNB1-205ENST00000573209 TMEM141Q96I45 108 aa7.74□□□□□ -1.17
CHRNB1-205ENST00000573209 PRRC2AP48634 2157 aaKnown RBP7.74□□□□□ -1.17
CHRNB1-205ENST00000573209 CFAP46Q8IYW2 2715 aa7.73□□□□□ -1.17
CHRNB1-205ENST00000573209 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
CHRNB1-205ENST00000573209 TRAV12-3A0A0B4J271 114 aa7.73□□□□□ -1.17
CHRNB1-205ENST00000573209 RPL28P46779 137 aaKnown RBP7.73□□□□□ -1.17
CHRNB1-205ENST00000573209 PRB3Q04118 309 aaPredicted RBP7.73□□□□□ -1.17
CHRNB1-205ENST00000573209 BEAN1Q3B7T3 259 aa7.73□□□□□ -1.17
CHRNB1-205ENST00000573209 LINC00846Q9NV44 126 aa7.73□□□□□ -1.17
CHRNB1-205ENST00000573209 TRBV10-3A0A0K0K1G6 114 aa7.73□□□□□ -1.17
CHRNB1-205ENST00000573209 ODF3BA8MYP8 253 aa7.73□□□□□ -1.17
CHRNB1-205ENST00000573209 KMT2BQ9UMN6 2715 aaPredicted RBP7.72□□□□□ -1.17
CHRNB1-205ENST00000573209 ABCA1O95477 2261 aa7.72□□□□□ -1.17
CHRNB1-205ENST00000573209 BLCAPP62952 87 aa7.72□□□□□ -1.17
CHRNB1-205ENST00000573209 MIAQ16674 131 aa7.72□□□□□ -1.17
CHRNB1-205ENST00000573209 C22orf24Q9Y442 160 aa7.72□□□□□ -1.17
CHRNB1-205ENST00000573209 A0A087WWL8 130 aa7.71□□□□□ -1.17
CHRNB1-205ENST00000573209 F8W735 103 aaPredicted RBP7.71□□□□□ -1.17
CHRNB1-205ENST00000573209 LYNX1G3V0Z9 82 aa7.71□□□□□ -1.17
CHRNB1-205ENST00000573209 TRBV12-3P01733 135 aa7.71□□□□□ -1.17
CHRNB1-205ENST00000573209 TRGV3P03979 118 aa7.71□□□□□ -1.17
CHRNB1-205ENST00000573209 LYNX1P0DP58 116 aa7.71□□□□□ -1.17
CHRNB1-205ENST00000573209 CD164L2Q6UWJ8 174 aa7.71□□□□□ -1.17
CHRNB1-205ENST00000573209 LITAFQ99732 161 aa7.71□□□□□ -1.17
CHRNB1-205ENST00000573209 SPTA1P02549 2419 aa7.71□□□□□ -1.17
CHRNB1-205ENST00000573209 IGKV2-40A0A087WW87 121 aaPredicted RBP7.71□□□□□ -1.18
CHRNB1-205ENST00000573209 IGKV2D-40P01614 121 aaPredicted RBP7.71□□□□□ -1.18
CHRNB1-205ENST00000573209 ESRGQ1W209 222 aa7.71□□□□□ -1.18
CHRNB1-205ENST00000573209 ZNF876PQ49A33 203 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms