RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CHCHD7Q9BUK0 85 aa4.93□□□□□ -1.62
NUP88-205ENST00000572809 IGKV2D-24A0A075B6R9 120 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 MGPP08493 103 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 NTF3P20783 257 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 TMEM97Q5BJF2 176 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 WDR73Q6P4I2 378 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 BAALCQ8WXS3 180 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 UBE2WQ96B02 151 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 TMEM18Q96B42 140 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 DNAJC30Q96LL9 226 aa4.92□□□□□ -1.62
NUP88-205ENST00000572809 LRP1BQ9NZR2 4599 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 TMEM250H0YL14 139 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 H7C1H1 209 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 K7EN84 100 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 M0QY20 66 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 LECT2O14960 151 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 TRGC1P0CF51 173 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 CAMPP49913 170 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 Q0VG73 95 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 NTM-AS1Q6ZSK4 140 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 Q8N976 141 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 LYPD6BQ8NI32 183 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 CHCHD5Q9BSY4 110 aa4.91□□□□□ -1.62
NUP88-205ENST00000572809 RNASE7Q9H1E1 156 aaKnown RBP4.91□□□□□ -1.62
NUP88-205ENST00000572809 EPM2AB3EWF7 344 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 PKIAP61925 76 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 WFDC2Q14508 124 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 TWIST1Q15672 202 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 C10orf25Q5T742 122 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 RASL11AQ6T310 242 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 ATRAIDQ6UW56 229 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 ENHOQ6UWT2 76 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 EIF5A2Q9GZV4 153 aaKnown RBP4.9□□□□□ -1.63
NUP88-205ENST00000572809 DPH3P1Q9H4G8 78 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 RPP21Q9H633 154 aaKnown RBP4.9□□□□□ -1.63
NUP88-205ENST00000572809 NIT2Q9NQR4 276 aa4.9□□□□□ -1.63
NUP88-205ENST00000572809 HSPG2P98160 4391 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.89□□□□□ -1.63
NUP88-205ENST00000572809 TRBV25-1A0A075B6N4 114 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 A0A1B0GVG6 124 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 GATCO43716 136 aaKnown RBP4.89□□□□□ -1.63
NUP88-205ENST00000572809 CRPP02741 224 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 SMR3BP02814 79 aaPredicted RBP4.89□□□□□ -1.63
NUP88-205ENST00000572809 ANGP03950 147 aaKnown RBP4.89□□□□□ -1.63
NUP88-205ENST00000572809 NKX2-5P52952 324 aaPredicted RBP4.89□□□□□ -1.63
NUP88-205ENST00000572809 CEBPGP53567 150 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 GAGE6Q13070 117 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 MPV17L2Q567V2 206 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 C15orf54Q8N8G6 183 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 FRZBQ92765 325 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 TMEM70Q9BUB7 260 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 CNFNQ9BYD5 112 aa4.89□□□□□ -1.63
NUP88-205ENST00000572809 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 IGHV1-24A0A0C4DH33 117 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 A8MWL6 223 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 NDUFS6O75380 124 aaKnown RBP4.88□□□□□ -1.63
NUP88-205ENST00000572809 CTRLP40313 264 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 RBX1P62877 108 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 MIAQ16674 131 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 IQCJQ1A5X6 159 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 FAM231DQ6ZW35 169 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 SMIM15Q7Z3B0 74 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 GTSF1Q8WW33 167 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 FAM210AQ96ND0 272 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 PAM16Q9Y3D7 125 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 RYR1P21817 5038 aa4.88□□□□□ -1.63
NUP88-205ENST00000572809 FOXA3P55318 350 aaPredicted RBP4.87□□□□□ -1.63
NUP88-205ENST00000572809 LINC00269Q8N2A0 174 aa4.87□□□□□ -1.63
NUP88-205ENST00000572809 GATD1Q8NB37 220 aa4.87□□□□□ -1.63
NUP88-205ENST00000572809 DEFB104AQ8WTQ1 72 aa4.87□□□□□ -1.63
NUP88-205ENST00000572809 PGLYRP4Q96LB8 373 aa4.87□□□□□ -1.63
NUP88-205ENST00000572809 SMIM7Q9BQ49 75 aa4.87□□□□□ -1.63
NUP88-205ENST00000572809 APOBP04114 4563 aaKnown RBP4.86□□□□□ -1.63
NUP88-205ENST00000572809 TRAV26-2A0A0B4J265 109 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 A0A1B0GUV1 79 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 ZNF727A8MUV8 499 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 SRP19P09132 144 aaKnown RBP4.86□□□□□ -1.63
NUP88-205ENST00000572809 INAFM2P0DMQ5 153 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 HAMPP81172 84 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 COTL1Q14019 142 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 C14orf177Q52M58 125 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 Q5VSD8 79 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 TEX261Q6UWH6 196 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 TMEM243Q9BU79 118 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 PRR34Q9NV39 138 aa4.86□□□□□ -1.63
NUP88-205ENST00000572809 UBE2L6O14933 153 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 AMTP48728 403 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 REG3AQ06141 175 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 TMEM241Q24JQ0 296 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 LINC01620Q4KN68 170 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 CLPSL2Q6UWE3 100 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 LINC01551Q86U37 167 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 C20orf203Q8NBC4 194 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 TSKUQ8WUA8 353 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 BORCS7Q96B45 105 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 OSTCQ9NRP0 149 aa4.85□□□□□ -1.63
NUP88-205ENST00000572809 PCLOQ9Y6V0 5065 aa4.84□□□□□ -1.63
NUP88-205ENST00000572809 IGLV4-60A0A075B6I1 120 aa4.84□□□□□ -1.63
NUP88-205ENST00000572809 TRAV8-4A0A0B4J246 113 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms