RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 CRPP02741 224 aa10.61□□□□□ -0.71
NDE1-205ENST00000572756 MIAQ16674 131 aa10.61□□□□□ -0.71
NDE1-205ENST00000572756 RPL39LQ96EH5 51 aaKnown RBP10.61□□□□□ -0.71
NDE1-205ENST00000572756 NAT8Q9UHE5 227 aa10.61□□□□□ -0.71
NDE1-205ENST00000572756 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
NDE1-205ENST00000572756 COTL1Q14019 142 aa10.6□□□□□ -0.71
NDE1-205ENST00000572756 C20orf203Q8NBC4 194 aa10.6□□□□□ -0.71
NDE1-205ENST00000572756 DEFB104AQ8WTQ1 72 aa10.6□□□□□ -0.71
NDE1-205ENST00000572756 BORCS7Q96B45 105 aa10.6□□□□□ -0.71
NDE1-205ENST00000572756 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
NDE1-205ENST00000572756 ADIRFQ15847 76 aa10.59□□□□□ -0.71
NDE1-205ENST00000572756 KRTAP26-1Q6PEX3 210 aa10.59□□□□□ -0.71
NDE1-205ENST00000572756 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
NDE1-205ENST00000572756 TMEM70Q9BUB7 260 aa10.59□□□□□ -0.71
NDE1-205ENST00000572756 IGLV4-60A0A075B6I1 120 aa10.58□□□□□ -0.72
NDE1-205ENST00000572756 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.58□□□□□ -0.72
NDE1-205ENST00000572756 TRBV6-5A0A0K0K1A5 114 aa10.58□□□□□ -0.72
NDE1-205ENST00000572756 GAS8-AS1O95177 125 aa10.58□□□□□ -0.72
NDE1-205ENST00000572756 AMTP48728 403 aa10.58□□□□□ -0.72
NDE1-205ENST00000572756 CLPSL2Q6UWE3 100 aa10.58□□□□□ -0.72
NDE1-205ENST00000572756 NUP35Q8NFH5 326 aa10.58□□□□□ -0.72
NDE1-205ENST00000572756 RNF185Q96GF1 192 aa10.58□□□□□ -0.72
NDE1-205ENST00000572756 SDHAF1A6NFY7 115 aa10.57□□□□□ -0.72
NDE1-205ENST00000572756 NCR2O95944 276 aa10.57□□□□□ -0.72
NDE1-205ENST00000572756 FAM30AQ9NZY2 134 aa10.57□□□□□ -0.72
NDE1-205ENST00000572756 FAT1Q14517 4588 aa10.57□□□□□ -0.72
NDE1-205ENST00000572756 RAB4AP20338 218 aa10.56□□□□□ -0.72
NDE1-205ENST00000572756 REG3AQ06141 175 aa10.56□□□□□ -0.72
NDE1-205ENST00000572756 Q6ZSA8 131 aa10.56□□□□□ -0.72
NDE1-205ENST00000572756 NAT8BQ9UHF3 227 aa10.56□□□□□ -0.72
NDE1-205ENST00000572756 SMIM27A0A1W2PRY6 76 aa10.55□□□□□ -0.72
NDE1-205ENST00000572756 RIGQ13278 110 aa10.55□□□□□ -0.72
NDE1-205ENST00000572756 AMN1Q8IY45 258 aa10.55□□□□□ -0.72
NDE1-205ENST00000572756 UBE2L6O14933 153 aa10.54□□□□□ -0.72
NDE1-205ENST00000572756 HLA-DQA1P01909 254 aa10.54□□□□□ -0.72
NDE1-205ENST00000572756 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
NDE1-205ENST00000572756 HAMPP81172 84 aa10.54□□□□□ -0.72
NDE1-205ENST00000572756 C14orf177Q52M58 125 aa10.54□□□□□ -0.72
NDE1-205ENST00000572756 MRAP2Q96G30 205 aa10.54□□□□□ -0.72
NDE1-205ENST00000572756 VPS13BQ7Z7G8 4022 aa10.54□□□□□ -0.72
NDE1-205ENST00000572756 USP17L23D6RBM5 183 aa10.53□□□□□ -0.72
NDE1-205ENST00000572756 TRAV8-4A0A0B4J246 113 aa10.52□□□□□ -0.73
NDE1-205ENST00000572756 EPM2AB3EWF7 344 aa10.52□□□□□ -0.73
NDE1-205ENST00000572756 H7C423 109 aa10.52□□□□□ -0.73
NDE1-205ENST00000572756 I3L3M4 83 aa10.52□□□□□ -0.73
NDE1-205ENST00000572756 APCSP02743 223 aa10.52□□□□□ -0.73
NDE1-205ENST00000572756 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.73
NDE1-205ENST00000572756 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
NDE1-205ENST00000572756 ST20Q9HBF5 79 aa10.52□□□□□ -0.73
NDE1-205ENST00000572756 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
NDE1-205ENST00000572756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.51□□□□□ -0.73
NDE1-205ENST00000572756 IGKV2-29A2NJV5 120 aaPredicted RBP10.51□□□□□ -0.73
NDE1-205ENST00000572756 TSHBP01222 138 aa10.51□□□□□ -0.73
NDE1-205ENST00000572756 PMCHP20382 165 aa10.51□□□□□ -0.73
NDE1-205ENST00000572756 TRBV27A0A0K0K1C4 114 aa10.5□□□□□ -0.73
NDE1-205ENST00000572756 SMKR1H3BMG3 65 aa10.5□□□□□ -0.73
NDE1-205ENST00000572756 SMR3BP02814 79 aaPredicted RBP10.5□□□□□ -0.73
NDE1-205ENST00000572756 PRSS1P07477 247 aa10.5□□□□□ -0.73
NDE1-205ENST00000572756 ESDP10768 282 aa10.5□□□□□ -0.73
NDE1-205ENST00000572756 FAM104BQ5XKR9 115 aa10.5□□□□□ -0.73
NDE1-205ENST00000572756 NRACQ8N912 160 aa10.5□□□□□ -0.73
NDE1-205ENST00000572756 A0A1B0GW15 77 aa10.49□□□□□ -0.73
NDE1-205ENST00000572756 FGF6P10767 208 aa10.49□□□□□ -0.73
NDE1-205ENST00000572756 Q5VSD8 79 aa10.49□□□□□ -0.73
NDE1-205ENST00000572756 TMEM242Q9NWH2 141 aa10.49□□□□□ -0.73
NDE1-205ENST00000572756 A0A1B0GXF2 115 aa10.48□□□□□ -0.73
NDE1-205ENST00000572756 RAB14P61106 215 aa10.48□□□□□ -0.73
NDE1-205ENST00000572756 MRPL51Q4U2R6 128 aaKnown RBP10.48□□□□□ -0.73
NDE1-205ENST00000572756 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
NDE1-205ENST00000572756 PPP1R17O96001 155 aa10.47□□□□□ -0.73
NDE1-205ENST00000572756 ZNF25P17030 456 aaPredicted RBP10.47□□□□□ -0.73
NDE1-205ENST00000572756 CAMPP49913 170 aa10.47□□□□□ -0.73
NDE1-205ENST00000572756 CLLU1Q5K131 121 aa10.47□□□□□ -0.73
NDE1-205ENST00000572756 SUMO2P61956 95 aaKnown RBP10.46□□□□□ -0.73
NDE1-205ENST00000572756 DGAT2L7PQ6IED9 249 aa10.46□□□□□ -0.73
NDE1-205ENST00000572756 RNASEKQ6P5S7 137 aaKnown RBP10.46□□□□□ -0.73
NDE1-205ENST00000572756 CLRN3Q8NCR9 226 aa10.46□□□□□ -0.73
NDE1-205ENST00000572756 SRRM2Q9UQ35 2752 aaKnown RBP10.46□□□□□ -0.74
NDE1-205ENST00000572756 VCYO14598 125 aa10.45□□□□□ -0.74
NDE1-205ENST00000572756 HBBP68871 147 aa10.45□□□□□ -0.74
NDE1-205ENST00000572756 MRPL54Q6P161 138 aaKnown RBP10.45□□□□□ -0.74
NDE1-205ENST00000572756 MRPL52Q86TS9 123 aaKnown RBP10.45□□□□□ -0.74
NDE1-205ENST00000572756 TRBV24-1A0A075B6N3 115 aa10.44□□□□□ -0.74
NDE1-205ENST00000572756 LINC00862A6NCI5 91 aa10.44□□□□□ -0.74
NDE1-205ENST00000572756 PPP1R2P9O14990 202 aa10.44□□□□□ -0.74
NDE1-205ENST00000572756 IFITM2Q01629 132 aa10.44□□□□□ -0.74
NDE1-205ENST00000572756 PNRC1Q12796 327 aaPredicted RBP10.44□□□□□ -0.74
NDE1-205ENST00000572756 SCXQ7RTU7 201 aa10.44□□□□□ -0.74
NDE1-205ENST00000572756 C9orf163Q8N9P6 203 aa10.44□□□□□ -0.74
NDE1-205ENST00000572756 IGKV3OR2-268A0A0C4DH90 116 aa10.43□□□□□ -0.74
NDE1-205ENST00000572756 C7orf77A4D0Y5 90 aa10.43□□□□□ -0.74
NDE1-205ENST00000572756 GAGE12HA6NDE8 117 aa10.43□□□□□ -0.74
NDE1-205ENST00000572756 FAM229AH3BQW9 127 aa10.43□□□□□ -0.74
NDE1-205ENST00000572756 S100A8P05109 93 aa10.43□□□□□ -0.74
NDE1-205ENST00000572756 CNBPP62633 177 aaKnown RBP10.43□□□□□ -0.74
NDE1-205ENST00000572756 OR5A1Q8NGJ0 315 aa10.43□□□□□ -0.74
NDE1-205ENST00000572756 CHAC1Q9BUX1 264 aa10.43□□□□□ -0.74
NDE1-205ENST00000572756 RPL32P62910 135 aaKnown RBP10.42□□□□□ -0.74
NDE1-205ENST00000572756 ATP5L2Q7Z4Y8 100 aa10.42□□□□□ -0.74
NDE1-205ENST00000572756 C15orf56Q8N910 161 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms