RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 NIT2Q9NQR4 276 aa6.2□□□□□ -1.42
TRAPPC1-205ENST00000572656 F2Z2F3 143 aa6.19□□□□□ -1.42
TRAPPC1-205ENST00000572656 AMTP48728 403 aa6.19□□□□□ -1.42
TRAPPC1-205ENST00000572656 COTL1Q14019 142 aa6.19□□□□□ -1.42
TRAPPC1-205ENST00000572656 OR2D3Q8NGH3 330 aa6.19□□□□□ -1.42
TRAPPC1-205ENST00000572656 PRSS3P2Q8NHM4 247 aa6.19□□□□□ -1.42
TRAPPC1-205ENST00000572656 TNXBP22105 4242 aa6.18□□□□□ -1.42
TRAPPC1-205ENST00000572656 IGKV2-24A0A0C4DH68 120 aa6.18□□□□□ -1.42
TRAPPC1-205ENST00000572656 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
TRAPPC1-205ENST00000572656 H2AFB1P0C5Y9 115 aa6.18□□□□□ -1.42
TRAPPC1-205ENST00000572656 TRGC1P0CF51 173 aa6.18□□□□□ -1.42
TRAPPC1-205ENST00000572656 HIGD2BQ4VC39 106 aa6.18□□□□□ -1.42
TRAPPC1-205ENST00000572656 STPG4Q8N801 248 aa6.18□□□□□ -1.42
TRAPPC1-205ENST00000572656 C11orf52Q96A22 123 aa6.18□□□□□ -1.42
TRAPPC1-205ENST00000572656 GVQW2A0A096LPI5 108 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC1-205ENST00000572656 XKRY2A2RUG3 117 aa6.17□□□□□ -1.42
TRAPPC1-205ENST00000572656 C19orf71A6NCJ1 209 aa6.17□□□□□ -1.42
TRAPPC1-205ENST00000572656 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
TRAPPC1-205ENST00000572656 ZNF345Q14585 488 aa6.17□□□□□ -1.42
TRAPPC1-205ENST00000572656 ODF1Q14990 250 aa6.17□□□□□ -1.42
TRAPPC1-205ENST00000572656 CENPWQ5EE01 88 aa6.17□□□□□ -1.42
TRAPPC1-205ENST00000572656 SPINK6Q6UWN8 80 aa6.17□□□□□ -1.42
TRAPPC1-205ENST00000572656 LYPD6BQ8NI32 183 aa6.17□□□□□ -1.42
TRAPPC1-205ENST00000572656 IGKV3OR2-268A0A0C4DH90 116 aa6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 IFNA1P01562 189 aa6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 NTF3P20783 257 aa6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 REG3GQ6UW15 175 aa6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 LYZL1Q6UWQ5 148 aa6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 C9orf62Q8N4C0 152 aa6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 CHCHD10Q8WYQ3 142 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 SMIM12Q96EX1 92 aa6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 MANBALQ9NQG1 85 aa6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
TRAPPC1-205ENST00000572656 A0A096LNI7 61 aa6.15□□□□□ -1.42
TRAPPC1-205ENST00000572656 SMLR1H3BR10 107 aa6.15□□□□□ -1.42
TRAPPC1-205ENST00000572656 GNG4P50150 75 aa6.15□□□□□ -1.42
TRAPPC1-205ENST00000572656 CCL20P78556 96 aa6.15□□□□□ -1.42
TRAPPC1-205ENST00000572656 AMMECR1LQ6DCA0 310 aa6.15□□□□□ -1.42
TRAPPC1-205ENST00000572656 GNG13Q9P2W3 67 aa6.15□□□□□ -1.42
TRAPPC1-205ENST00000572656 RAB19A4D1S5 217 aa6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 H7C423 109 aa6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 BCL2L11O43521 198 aa6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 NCR2O95944 276 aa6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 FOXI1Q12951 378 aa6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 SRSF9Q13242 221 aaKnown RBP eCLIP6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 RNASEKQ6P5S7 137 aaKnown RBP6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 GATD1Q8NB37 220 aa6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 BIN3Q9NQY0 253 aa6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
TRAPPC1-205ENST00000572656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 TRAV1-1A0A0B4J248 108 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 TRAV26-2A0A0B4J265 109 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 KANTRA0A1W2PQU2 76 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 IGKV2-29A2NJV5 120 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 HMSDA8MTL9 139 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 CTRLP40313 264 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 EIF5AP63241 154 aaKnown RBP6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 TWIST1Q15672 202 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 Q6ZNX1 250 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 Q6ZRP5 223 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 CNFNQ9BYD5 112 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 BATF3Q9NR55 127 aa6.13□□□□□ -1.43
TRAPPC1-205ENST00000572656 TRBV20OR9-2A0A075B6H5 130 aa6.12□□□□□ -1.43
TRAPPC1-205ENST00000572656 PDE6DO43924 150 aa6.12□□□□□ -1.43
TRAPPC1-205ENST00000572656 FGF6P10767 208 aa6.12□□□□□ -1.43
TRAPPC1-205ENST00000572656 OR5A1Q8NGJ0 315 aa6.12□□□□□ -1.43
TRAPPC1-205ENST00000572656 IGHV1-58A0A0C4DH39 117 aa6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 APCSP02743 223 aa6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 XCL1P47992 114 aa6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 MEF2BQ02080 365 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 TEX261Q6UWH6 196 aa6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 NUDT10Q8NFP7 164 aa6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 RPL39LQ96EH5 51 aaKnown RBP6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 NUDT11Q96G61 164 aa6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 CARD19Q96LW7 228 aa6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 MED9Q9NWA0 146 aa6.11□□□□□ -1.43
TRAPPC1-205ENST00000572656 LINC00959A0A1B0GUT2 108 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 SDHAF1A6NFY7 115 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 TEX46H3BTG2 121 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 CCL25O15444 150 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 GAS8-AS1O95177 125 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 RGS21Q2M5E4 152 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 SMIM15Q7Z3B0 74 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 LINC00526Q96FQ7 95 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 TMEM101Q96IK0 257 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 BTF3L4Q96K17 158 aa6.1□□□□□ -1.43
TRAPPC1-205ENST00000572656 FAM231BA6NCW3 169 aa6.09□□□□□ -1.43
TRAPPC1-205ENST00000572656 I3L3M4 83 aa6.09□□□□□ -1.43
TRAPPC1-205ENST00000572656 ZNF561-AS1K7EIQ3 104 aa6.09□□□□□ -1.43
TRAPPC1-205ENST00000572656 FOXA3P55318 350 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC1-205ENST00000572656 SYCNQ0VAF6 134 aa6.09□□□□□ -1.43
TRAPPC1-205ENST00000572656 RPP21Q9H633 154 aaKnown RBP6.09□□□□□ -1.43
TRAPPC1-205ENST00000572656 ESDP10768 282 aa6.08□□□□□ -1.44
TRAPPC1-205ENST00000572656 PMCHP20382 165 aa6.08□□□□□ -1.44
TRAPPC1-205ENST00000572656 PTTG1IPP53801 180 aa6.08□□□□□ -1.44
TRAPPC1-205ENST00000572656 SS18Q15532 418 aa6.08□□□□□ -1.44
TRAPPC1-205ENST00000572656 CD164L2Q6UWJ8 174 aa6.08□□□□□ -1.44
TRAPPC1-205ENST00000572656 RNASE7Q9H1E1 156 aaKnown RBP6.08□□□□□ -1.44
TRAPPC1-205ENST00000572656 TRBV6-5A0A0K0K1A5 114 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms