RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 RAB24Q969Q5 203 aa7.69□□□□□ -1.18
CCDC40-208ENST00000572270 RETNLBQ9BQ08 111 aa7.69□□□□□ -1.18
CCDC40-208ENST00000572270 IGLV4-69A0A075B6H9 119 aa7.68□□□□□ -1.18
CCDC40-208ENST00000572270 SNAI2O43623 268 aa7.68□□□□□ -1.18
CCDC40-208ENST00000572270 UBE2G1P62253 170 aa7.68□□□□□ -1.18
CCDC40-208ENST00000572270 RNASEKQ6P5S7 137 aaKnown RBP7.68□□□□□ -1.18
CCDC40-208ENST00000572270 NUDT15Q9NV35 164 aa7.68□□□□□ -1.18
CCDC40-208ENST00000572270 H0YIZ8 118 aa7.67□□□□□ -1.18
CCDC40-208ENST00000572270 CCL25O15444 150 aa7.67□□□□□ -1.18
CCDC40-208ENST00000572270 CXCL1P09341 107 aa7.67□□□□□ -1.18
CCDC40-208ENST00000572270 SUMO4Q6EEV6 95 aa7.67□□□□□ -1.18
CCDC40-208ENST00000572270 HIST1H2BAQ96A08 127 aa7.67□□□□□ -1.18
CCDC40-208ENST00000572270 FMC1Q96HJ9 113 aa7.67□□□□□ -1.18
CCDC40-208ENST00000572270 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
CCDC40-208ENST00000572270 RPP21Q9H633 154 aaKnown RBP7.67□□□□□ -1.18
CCDC40-208ENST00000572270 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-208ENST00000572270 OR5AL1P0C617 328 aa7.66□□□□□ -1.18
CCDC40-208ENST00000572270 MEF2BQ02080 365 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-208ENST00000572270 NUP35Q8NFH5 326 aa7.66□□□□□ -1.18
CCDC40-208ENST00000572270 CAMK2N2Q96S95 79 aa7.66□□□□□ -1.18
CCDC40-208ENST00000572270 IGLV7-46A0A075B6I9 117 aa7.65□□□□□ -1.18
CCDC40-208ENST00000572270 SIX6O95475 246 aa7.65□□□□□ -1.18
CCDC40-208ENST00000572270 RASL11AQ6T310 242 aa7.65□□□□□ -1.18
CCDC40-208ENST00000572270 KRTAP11-1Q8IUC1 163 aa7.65□□□□□ -1.18
CCDC40-208ENST00000572270 OR5A1Q8NGJ0 315 aa7.65□□□□□ -1.18
CCDC40-208ENST00000572270 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.18
CCDC40-208ENST00000572270 UBE2G2P60604 165 aa7.64□□□□□ -1.19
CCDC40-208ENST00000572270 UBE2BP63146 152 aa7.64□□□□□ -1.19
CCDC40-208ENST00000572270 LINC00959A0A1B0GUT2 108 aa7.63□□□□□ -1.19
CCDC40-208ENST00000572270 LYRM1O43325 122 aa7.63□□□□□ -1.19
CCDC40-208ENST00000572270 H2AFB2P0C5Z0 115 aa7.63□□□□□ -1.19
CCDC40-208ENST00000572270 NKX6-2Q9C056 277 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-208ENST00000572270 NIT2Q9NQR4 276 aa7.63□□□□□ -1.19
CCDC40-208ENST00000572270 LTAP01374 205 aa7.62□□□□□ -1.19
CCDC40-208ENST00000572270 MBP02144 154 aa7.62□□□□□ -1.19
CCDC40-208ENST00000572270 PET100P0DJ07 73 aa7.62□□□□□ -1.19
CCDC40-208ENST00000572270 IL7P13232 177 aa7.62□□□□□ -1.19
CCDC40-208ENST00000572270 MALP21145 153 aa7.62□□□□□ -1.19
CCDC40-208ENST00000572270 SS18Q15532 418 aa7.62□□□□□ -1.19
CCDC40-208ENST00000572270 FAM19A5Q7Z5A7 132 aaPredicted RBP7.62□□□□□ -1.19
CCDC40-208ENST00000572270 BTF3L4Q96K17 158 aa7.62□□□□□ -1.19
CCDC40-208ENST00000572270 ACTR3CQ9C0K3 210 aaPredicted RBP7.62□□□□□ -1.19
CCDC40-208ENST00000572270 WFDC1Q9HC57 220 aa7.62□□□□□ -1.19
CCDC40-208ENST00000572270 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-208ENST00000572270 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-208ENST00000572270 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-208ENST00000572270 H7C423 109 aa7.61□□□□□ -1.19
CCDC40-208ENST00000572270 CD164L2Q6UWJ8 174 aa7.61□□□□□ -1.19
CCDC40-208ENST00000572270 LINC00173Q6ZV60 143 aa7.61□□□□□ -1.19
CCDC40-208ENST00000572270 OPRPNQ99935 248 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-208ENST00000572270 A0A087X002 238 aa7.6□□□□□ -1.19
CCDC40-208ENST00000572270 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
CCDC40-208ENST00000572270 C19orf71A6NCJ1 209 aa7.6□□□□□ -1.19
CCDC40-208ENST00000572270 ZNF25P17030 456 aaPredicted RBP7.6□□□□□ -1.19
CCDC40-208ENST00000572270 PPP1R1CQ8WVI7 109 aa7.6□□□□□ -1.19
CCDC40-208ENST00000572270 TMEM101Q96IK0 257 aa7.6□□□□□ -1.19
CCDC40-208ENST00000572270 FAM74A7A6NL05 159 aa7.59□□□□□ -1.19
CCDC40-208ENST00000572270 PLA2G10O15496 165 aa7.59□□□□□ -1.19
CCDC40-208ENST00000572270 BCL2L11O43521 198 aa7.59□□□□□ -1.19
CCDC40-208ENST00000572270 ZNF861PO60384 105 aa7.59□□□□□ -1.19
CCDC40-208ENST00000572270 APCSP02743 223 aa7.59□□□□□ -1.19
CCDC40-208ENST00000572270 C2orf48Q96LS8 159 aa7.59□□□□□ -1.19
CCDC40-208ENST00000572270 M0QXV9 152 aa7.58□□□□□ -1.2
CCDC40-208ENST00000572270 NCR2O95944 276 aa7.58□□□□□ -1.2
CCDC40-208ENST00000572270 AKR1C3P42330 323 aa7.58□□□□□ -1.2
CCDC40-208ENST00000572270 PSMG3Q9BT73 122 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-208ENST00000572270 TPPP3Q9BW30 176 aa7.58□□□□□ -1.2
CCDC40-208ENST00000572270 PPDPFQ9H3Y8 114 aa7.58□□□□□ -1.2
CCDC40-208ENST00000572270 COX7A2LO14548 114 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 MPC2O95563 127 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 CFC1BP0CG36 223 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 ESDP10768 282 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 NTF3P20783 257 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 ATP6V0CP27449 155 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 SERF2P84101 59 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 RNF151Q2KHN1 245 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 ASB16-AS1Q495Z4 193 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 Q6ZNX1 250 aa7.57□□□□□ -1.2
CCDC40-208ENST00000572270 CCDC160A6NGH7 325 aa7.56□□□□□ -1.2
CCDC40-208ENST00000572270 STOML3Q8TAV4 291 aa7.56□□□□□ -1.2
CCDC40-208ENST00000572270 IMMP2LQ96T52 175 aa7.56□□□□□ -1.2
CCDC40-208ENST00000572270 TRGC1P0CF51 173 aa7.55□□□□□ -1.2
CCDC40-208ENST00000572270 LINC00337Q8N6G1 96 aa7.55□□□□□ -1.2
CCDC40-208ENST00000572270 LINC00304Q8N9R0 145 aa7.55□□□□□ -1.2
CCDC40-208ENST00000572270 TCEAL7Q9BRU2 100 aa7.55□□□□□ -1.2
CCDC40-208ENST00000572270 TNFSF18Q9UNG2 199 aa7.55□□□□□ -1.2
CCDC40-208ENST00000572270 FAM240BA0A1B0GVZ2 78 aa7.54□□□□□ -1.2
CCDC40-208ENST00000572270 SPAG11BQ08648 103 aa7.54□□□□□ -1.2
CCDC40-208ENST00000572270 OR2D3Q8NGH3 330 aa7.54□□□□□ -1.2
CCDC40-208ENST00000572270 CCDC32Q9BV29 185 aa7.54□□□□□ -1.2
CCDC40-208ENST00000572270 CTXND1A0A1B0GTU2 59 aa7.53□□□□□ -1.2
CCDC40-208ENST00000572270 TSHBP01222 138 aa7.53□□□□□ -1.2
CCDC40-208ENST00000572270 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
CCDC40-208ENST00000572270 H2BFSP57053 126 aa7.52□□□□□ -1.21
CCDC40-208ENST00000572270 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
CCDC40-208ENST00000572270 GAGE2EQ4V326 116 aa7.52□□□□□ -1.21
CCDC40-208ENST00000572270 CST9LP1Q5W188 147 aa7.52□□□□□ -1.21
CCDC40-208ENST00000572270 MRPL35Q9NZE8 188 aaKnown RBP7.52□□□□□ -1.21
CCDC40-208ENST00000572270 GAGE2DQ9UEU5 116 aa7.52□□□□□ -1.21
CCDC40-208ENST00000572270 C1orf196B1AJZ1 125 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms