RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 TMEM70Q9BUB7 260 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 CHCHD7Q9BUK0 85 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 TMEM242Q9NWH2 141 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 TRBV25-1A0A075B6N4 114 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.64□□□□□ -1.67
SMG6-209ENST00000571442 A0A087WTM6 91 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 IGHV1-24A0A0C4DH33 117 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 IGKV2-29A2NJV5 120 aaPredicted RBP4.64□□□□□ -1.67
SMG6-209ENST00000571442 C7orf77A4D0Y5 90 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 LRCOL1A6NCL2 159 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 D6R8Y8 96 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 NPYP01303 97 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 BTF3P20290 206 aaKnown RBP4.64□□□□□ -1.67
SMG6-209ENST00000571442 COTL1Q14019 142 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 CLPSL2Q6UWE3 100 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 CLRN3Q8NCR9 226 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 FRZBQ92765 325 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 UBE2WQ96B02 151 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 TMEM243Q9BU79 118 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 HSPG2P98160 4391 aa4.64□□□□□ -1.67
SMG6-209ENST00000571442 A0A087WX48 190 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 A0A1B0GW15 77 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 K7EP13 123 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 ESDP10768 282 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 AMTP48728 403 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 LAGE3Q14657 143 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 TMEM97Q5BJF2 176 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 KRTAP26-1Q6PEX3 210 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 TMEM136Q6ZRR5 245 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 SPATA12Q7Z6I5 190 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 SLC7A5P1Q8MH63 180 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 ST20Q9HBF5 79 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 URGCP-MRPS24S4R325 110 aa4.63□□□□□ -1.67
SMG6-209ENST00000571442 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 TRBV24-1A0A075B6N3 115 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 TRBV27A0A0K0K1C4 114 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 I3L3M4 83 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 LECT2O14960 151 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 TNFRSF6BO95407 300 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 APCSP02743 223 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 ANGP03950 147 aaKnown RBP4.62□□□□□ -1.67
SMG6-209ENST00000571442 PMCHP20382 165 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 SUMO2P61956 95 aaKnown RBP4.62□□□□□ -1.67
SMG6-209ENST00000571442 KCNIP4Q6PIL6 250 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 NFE4Q86UQ8 179 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 LINC00269Q8N2A0 174 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 BTF3L4Q96K17 158 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 IMMP2LQ96T52 175 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 CTDSP1Q9GZU7 261 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 RPS10P5Q9NQ39 176 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 PRR34Q9NV39 138 aa4.62□□□□□ -1.67
SMG6-209ENST00000571442 IGKV2D-24A0A075B6R9 120 aa4.61□□□□□ -1.67
SMG6-209ENST00000571442 APOC3P02656 99 aa4.61□□□□□ -1.67
SMG6-209ENST00000571442 CKS2P33552 79 aa4.61□□□□□ -1.67
SMG6-209ENST00000571442 KIAA1644Q3SXP7 199 aa4.61□□□□□ -1.67
SMG6-209ENST00000571442 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.61□□□□□ -1.67
SMG6-209ENST00000571442 BAALCQ8WXS3 180 aa4.61□□□□□ -1.67
SMG6-209ENST00000571442 FAM104AQ969W3 186 aa4.61□□□□□ -1.67
SMG6-209ENST00000571442 IGLV10-54A0A075B6I4 117 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 TRAV8-3A0A0A6YYJ7 113 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 TGIF2-C20orf24A0A0A6YYL0 155 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 A0A1B0GUV1 79 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 VCYO14598 125 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 TCAPO15273 167 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 S100A8P05109 93 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 FGF6P10767 208 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 REG3AQ06141 175 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 RHEBQ15382 184 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 PRELID3AQ96N28 172 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 SMIM2Q9BVW6 85 aa4.6□□□□□ -1.67
SMG6-209ENST00000571442 IGKV3OR2-268A0A0C4DH90 116 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 LOC389332A0A1B0GUA5 103 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 C16orf90A8MZG2 172 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 UBE2L6O14933 153 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 PSCAO43653 123 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 KRTAP10-1P60331 282 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 RPL39P62891 51 aaKnown RBP4.59□□□□□ -1.67
SMG6-209ENST00000571442 RPL32P62910 135 aaKnown RBP4.59□□□□□ -1.67
SMG6-209ENST00000571442 ELOBQ15370 118 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 RNASE13Q5GAN3 156 aaKnown RBP4.59□□□□□ -1.67
SMG6-209ENST00000571442 RNASEKQ6P5S7 137 aaKnown RBP4.59□□□□□ -1.67
SMG6-209ENST00000571442 ORMDL3Q8N138 153 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 Q8N814 137 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 NTN5Q8WTR8 489 aaPredicted RBP4.59□□□□□ -1.67
SMG6-209ENST00000571442 YPEL4Q96NS1 127 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 C20orf78Q9BR46 151 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 UBE2D4Q9Y2X8 147 aa4.59□□□□□ -1.67
SMG6-209ENST00000571442 FAT1Q14517 4588 aa4.59□□□□□ -1.68
SMG6-209ENST00000571442 TRAV9-1A0A075B6T8 112 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 PRSS47A8MTI9 375 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 H7C423 109 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 PHOX2AO14813 284 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 PPP1R17O96001 155 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 CRPP02741 224 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 PPBPP02775 128 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 PKIAP61925 76 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 Q0VG73 95 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 MIAQ16674 131 aa4.58□□□□□ -1.68
SMG6-209ENST00000571442 Q6ZUT4 128 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms