RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 EIF5AP63241 154 aaKnown RBP11.11□□□□□ -0.63
CIITA-206ENST00000571190 C9orf62Q8N4C0 152 aa11.11□□□□□ -0.63
CIITA-206ENST00000571190 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
CIITA-206ENST00000571190 RNF185Q96GF1 192 aa11.11□□□□□ -0.63
CIITA-206ENST00000571190 DPH3P1Q9H4G8 78 aa11.11□□□□□ -0.63
CIITA-206ENST00000571190 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
CIITA-206ENST00000571190 IFNA1P01562 189 aa11.1□□□□□ -0.63
CIITA-206ENST00000571190 TRGC1P0CF51 173 aa11.1□□□□□ -0.63
CIITA-206ENST00000571190 GNG4P50150 75 aa11.1□□□□□ -0.63
CIITA-206ENST00000571190 AP5S1Q9NUS5 200 aa11.1□□□□□ -0.63
CIITA-206ENST00000571190 PLAC8Q9NZF1 115 aa11.1□□□□□ -0.63
CIITA-206ENST00000571190 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
CIITA-206ENST00000571190 AMTP48728 403 aa11.09□□□□□ -0.63
CIITA-206ENST00000571190 COTL1Q14019 142 aa11.09□□□□□ -0.63
CIITA-206ENST00000571190 DPH3Q96FX2 82 aa11.09□□□□□ -0.63
CIITA-206ENST00000571190 GAGE12HA6NDE8 117 aa11.08□□□□□ -0.64
CIITA-206ENST00000571190 CTRLP40313 264 aa11.08□□□□□ -0.64
CIITA-206ENST00000571190 MEF2BQ02080 365 aaPredicted RBP11.08□□□□□ -0.64
CIITA-206ENST00000571190 WDR73Q6P4I2 378 aa11.08□□□□□ -0.64
CIITA-206ENST00000571190 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
CIITA-206ENST00000571190 NUDT10Q8NFP7 164 aa11.08□□□□□ -0.64
CIITA-206ENST00000571190 NUDT11Q96G61 164 aa11.08□□□□□ -0.64
CIITA-206ENST00000571190 CNFNQ9BYD5 112 aa11.08□□□□□ -0.64
CIITA-206ENST00000571190 TRAV26-2A0A0B4J265 109 aa11.07□□□□□ -0.64
CIITA-206ENST00000571190 UBE2L6O14933 153 aa11.07□□□□□ -0.64
CIITA-206ENST00000571190 PDE6DO43924 150 aa11.07□□□□□ -0.64
CIITA-206ENST00000571190 SULT1A2P50226 295 aa11.07□□□□□ -0.64
CIITA-206ENST00000571190 MED9Q9NWA0 146 aa11.07□□□□□ -0.64
CIITA-206ENST00000571190 PHOX2AO14813 284 aa11.06□□□□□ -0.64
CIITA-206ENST00000571190 COX6A2Q02221 97 aa11.06□□□□□ -0.64
CIITA-206ENST00000571190 PRSS3P2Q8NHM4 247 aa11.06□□□□□ -0.64
CIITA-206ENST00000571190 TWIST1Q15672 202 aa11.05□□□□□ -0.64
CIITA-206ENST00000571190 HIGD2BQ4VC39 106 aa11.05□□□□□ -0.64
CIITA-206ENST00000571190 Q6ZNX1 250 aa11.05□□□□□ -0.64
CIITA-206ENST00000571190 IGKV3OR2-268A0A0C4DH90 116 aa11.04□□□□□ -0.64
CIITA-206ENST00000571190 K7EN84 100 aa11.04□□□□□ -0.64
CIITA-206ENST00000571190 BCL2P10415 239 aa11.04□□□□□ -0.64
CIITA-206ENST00000571190 RPS10P46783 165 aaKnown RBP11.04□□□□□ -0.64
CIITA-206ENST00000571190 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
CIITA-206ENST00000571190 CHCHD10Q8WYQ3 142 aaPredicted RBP11.04□□□□□ -0.64
CIITA-206ENST00000571190 RPL39LQ96EH5 51 aaKnown RBP11.04□□□□□ -0.64
CIITA-206ENST00000571190 BIN3Q9NQY0 253 aa11.04□□□□□ -0.64
CIITA-206ENST00000571190 CFAP161Q6P656 301 aa11.03□□□□□ -0.64
CIITA-206ENST00000571190 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
CIITA-206ENST00000571190 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.02□□□□□ -0.65
CIITA-206ENST00000571190 IGKV2-29A2NJV5 120 aaPredicted RBP11.02□□□□□ -0.65
CIITA-206ENST00000571190 TEX46H3BTG2 121 aa11.02□□□□□ -0.65
CIITA-206ENST00000571190 NDUFS6O75380 124 aaKnown RBP11.02□□□□□ -0.65
CIITA-206ENST00000571190 GTSF1Q8WW33 167 aa11.02□□□□□ -0.65
CIITA-206ENST00000571190 RPP21Q9H633 154 aaKnown RBP11.02□□□□□ -0.65
CIITA-206ENST00000571190 GVQW2A0A096LPI5 108 aaPredicted RBP11.01□□□□□ -0.65
CIITA-206ENST00000571190 MAJINQ3KP22 176 aa11.01□□□□□ -0.65
CIITA-206ENST00000571190 EIF5AL1Q6IS14 154 aaKnown RBP11.01□□□□□ -0.65
CIITA-206ENST00000571190 OCC1Q8TAD7 63 aa11.01□□□□□ -0.65
CIITA-206ENST00000571190 IGKV2-24A0A0C4DH68 120 aa11□□□□□ -0.65
CIITA-206ENST00000571190 FAM231BA6NCW3 169 aa11□□□□□ -0.65
CIITA-206ENST00000571190 NCR2O95944 276 aa11□□□□□ -0.65
CIITA-206ENST00000571190 FGF6P10767 208 aa11□□□□□ -0.65
CIITA-206ENST00000571190 FOXI1Q12951 378 aa11□□□□□ -0.65
CIITA-206ENST00000571190 C7orf33Q8WU49 177 aa11□□□□□ -0.65
CIITA-206ENST00000571190 TNXBP22105 4242 aa10.99□□□□□ -0.65
CIITA-206ENST00000571190 ODF1Q14990 250 aa10.99□□□□□ -0.65
CIITA-206ENST00000571190 AMMECR1LQ6DCA0 310 aa10.99□□□□□ -0.65
CIITA-206ENST00000571190 A0A096LNI7 61 aa10.98□□□□□ -0.65
CIITA-206ENST00000571190 SDHAF1A6NFY7 115 aa10.98□□□□□ -0.65
CIITA-206ENST00000571190 H7C423 109 aa10.98□□□□□ -0.65
CIITA-206ENST00000571190 PRR3P79522 188 aaKnown RBP10.98□□□□□ -0.65
CIITA-206ENST00000571190 RNASEKQ6P5S7 137 aaKnown RBP10.98□□□□□ -0.65
CIITA-206ENST00000571190 STPG4Q8N801 248 aa10.98□□□□□ -0.65
CIITA-206ENST00000571190 LINC01600Q96MT4 127 aa10.98□□□□□ -0.65
CIITA-206ENST00000571190 GAS8-AS1O95177 125 aa10.97□□□□□ -0.65
CIITA-206ENST00000571190 APCSP02743 223 aa10.97□□□□□ -0.65
CIITA-206ENST00000571190 OR5A1Q8NGJ0 315 aa10.96□□□□□ -0.65
CIITA-206ENST00000571190 LYPD6BQ8NI32 183 aa10.96□□□□□ -0.65
CIITA-206ENST00000571190 LINC00526Q96FQ7 95 aa10.96□□□□□ -0.65
CIITA-206ENST00000571190 TRBV6-5A0A0K0K1A5 114 aa10.95□□□□□ -0.66
CIITA-206ENST00000571190 ESDP10768 282 aa10.95□□□□□ -0.66
CIITA-206ENST00000571190 TAGLN2P37802 199 aaKnown RBP10.95□□□□□ -0.66
CIITA-206ENST00000571190 SLC51BQ86UW2 128 aa10.95□□□□□ -0.66
CIITA-206ENST00000571190 LRP2P98164 4655 aa10.95□□□□□ -0.66
CIITA-206ENST00000571190 LINC00959A0A1B0GUT2 108 aa10.94□□□□□ -0.66
CIITA-206ENST00000571190 ZNF25P17030 456 aaPredicted RBP10.94□□□□□ -0.66
CIITA-206ENST00000571190 XCL1P47992 114 aa10.94□□□□□ -0.66
CIITA-206ENST00000571190 TEX261Q6UWH6 196 aa10.94□□□□□ -0.66
CIITA-206ENST00000571190 hCG_2014768A0A024R1R8 64 aa10.93□□□□□ -0.66
CIITA-206ENST00000571190 A0A1B0GVG6 124 aa10.93□□□□□ -0.66
CIITA-206ENST00000571190 I3L3M4 83 aa10.93□□□□□ -0.66
CIITA-206ENST00000571190 CCL25O15444 150 aa10.93□□□□□ -0.66
CIITA-206ENST00000571190 TSHBP01222 138 aa10.93□□□□□ -0.66
CIITA-206ENST00000571190 PMCHP20382 165 aa10.93□□□□□ -0.66
CIITA-206ENST00000571190 SMIM15Q7Z3B0 74 aa10.93□□□□□ -0.66
CIITA-206ENST00000571190 TCTE3Q8IZS6 198 aa10.93□□□□□ -0.66
CIITA-206ENST00000571190 GATCO43716 136 aaKnown RBP10.92□□□□□ -0.66
CIITA-206ENST00000571190 KRTAP10-8P60410 259 aa10.92□□□□□ -0.66
CIITA-206ENST00000571190 FAM231DQ6ZW35 169 aa10.92□□□□□ -0.66
CIITA-206ENST00000571190 SRSF9Q13242 221 aaKnown RBP eCLIP10.91□□□□□ -0.66
CIITA-206ENST00000571190 TMEM242Q9NWH2 141 aa10.91□□□□□ -0.66
CIITA-206ENST00000571190 IGHV1-58A0A0C4DH39 117 aa10.9□□□□□ -0.66
CIITA-206ENST00000571190 A0A0J9YXV3 536 aa10.9□□□□□ -0.66
CIITA-206ENST00000571190 A8MWL6 223 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms