RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ZFHX3Q15911 3703 aa11.33□□□□□ -0.6
USP43-202ENST00000570475 CHD6Q8TD26 2715 aa11.33□□□□□ -0.6
USP43-202ENST00000570475 H3BUA1 57 aa11.33□□□□□ -0.6
USP43-202ENST00000570475 UBE2D1P51668 147 aa11.33□□□□□ -0.6
USP43-202ENST00000570475 TRGV1A0A0A0MS02 117 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 TRBV27A0A0K0K1C4 114 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 COX6B1P14854 86 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 IGLV4-3A0A075B6K6 122 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 TRBV20-1A0A075B6N2 111 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 ANAPC13Q9BS18 74 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 PRO0461Q9UI25 63 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 LEPROTO15243 131 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 SNCGO76070 127 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 TOMM7Q9P0U1 55 aa11.32□□□□□ -0.6
USP43-202ENST00000570475 M0R2P5 195 aa11.31□□□□□ -0.6
USP43-202ENST00000570475 IGLV1-40P01703 118 aa11.31□□□□□ -0.6
USP43-202ENST00000570475 XGP55808 180 aa11.31□□□□□ -0.6
USP43-202ENST00000570475 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
USP43-202ENST00000570475 TEX15Q9BXT5 2789 aa11.31□□□□□ -0.6
USP43-202ENST00000570475 K7EQG2 157 aa11.31□□□□□ -0.6
USP43-202ENST00000570475 TEX29Q8N6K0 151 aa11.31□□□□□ -0.6
USP43-202ENST00000570475 TRAV26-1A0A087WT03 109 aa11.31□□□□□ -0.6
USP43-202ENST00000570475 CLEC2BQ92478 149 aa11.31□□□□□ -0.6
USP43-202ENST00000570475 TMEM61Q8N0U2 210 aa11.3□□□□□ -0.6
USP43-202ENST00000570475 K7EMT4 169 aa11.3□□□□□ -0.6
USP43-202ENST00000570475 LGALS9O00182 355 aa11.3□□□□□ -0.6
USP43-202ENST00000570475 PSMB8P28062 276 aa11.3□□□□□ -0.6
USP43-202ENST00000570475 A0A0J9YXY3 114 aa11.29□□□□□ -0.6
USP43-202ENST00000570475 RHOHQ15669 191 aa11.29□□□□□ -0.6
USP43-202ENST00000570475 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
USP43-202ENST00000570475 TMEM223A0PJW6 202 aa11.29□□□□□ -0.6
USP43-202ENST00000570475 C19orf54Q5BKX5 351 aa11.29□□□□□ -0.6
USP43-202ENST00000570475 Q6ZUT4 128 aa11.29□□□□□ -0.6
USP43-202ENST00000570475 LINC01356Q8N9X3 169 aa11.29□□□□□ -0.6
USP43-202ENST00000570475 TEX49A0A1B0GTD5 131 aa11.29□□□□□ -0.6
USP43-202ENST00000570475 ATXN8Q156A1 80 aa11.29□□□□□ -0.6
USP43-202ENST00000570475 TTC32Q5I0X7 151 aa11.28□□□□□ -0.6
USP43-202ENST00000570475 FBN2P35556 2912 aa11.28□□□□□ -0.6
USP43-202ENST00000570475 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
USP43-202ENST00000570475 IGHV3-33P01772 117 aa11.27□□□□□ -0.6
USP43-202ENST00000570475 SPATA25Q9BR10 227 aa11.27□□□□□ -0.6
USP43-202ENST00000570475 ZFAND6Q6FIF0 208 aa11.27□□□□□ -0.61
USP43-202ENST00000570475 C9orf85Q96MD7 179 aa11.27□□□□□ -0.61
USP43-202ENST00000570475 IGSF10Q6WRI0 2623 aa11.27□□□□□ -0.61
USP43-202ENST00000570475 ZNF415Q09FC8 603 aa11.27□□□□□ -0.61
USP43-202ENST00000570475 VPS13CQ709C8 3753 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 ELANEP08246 267 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 GAGE2EQ4V326 116 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 FAM19A4Q96LR4 140 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 GAGE2DQ9UEU5 116 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 TRAV8-4A0A0B4J246 113 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 GAGE12JA6NER3 117 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 RPL13AP40429 203 aaKnown RBP11.26□□□□□ -0.61
USP43-202ENST00000570475 GAGE4Q13068 117 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 GAGE5Q13069 117 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 Q6ZSN1 163 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 RBMY1A1P0DJD3 496 aaKnown RBP11.26□□□□□ -0.61
USP43-202ENST00000570475 RBMY1CP0DJD4 496 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
USP43-202ENST00000570475 RBMY1FQ15415 496 aaKnown RBP11.26□□□□□ -0.61
USP43-202ENST00000570475 LINC01620Q4KN68 170 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 STHQ8IWL8 128 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 LINC00467Q9BRT7 94 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 NF1P21359 2839 aa11.26□□□□□ -0.61
USP43-202ENST00000570475 CRYBA4P53673 196 aa11.25□□□□□ -0.61
USP43-202ENST00000570475 CSMD2Q7Z408 3487 aa11.25□□□□□ -0.61
USP43-202ENST00000570475 NDUFA7O95182 113 aa11.25□□□□□ -0.61
USP43-202ENST00000570475 UBE2D3P61077 147 aa11.25□□□□□ -0.61
USP43-202ENST00000570475 UBE2D2P62837 147 aa11.25□□□□□ -0.61
USP43-202ENST00000570475 CDKN2A-AS1Q9UH64 79 aa11.25□□□□□ -0.61
USP43-202ENST00000570475 TRBV7-9A0A0J9YWB2 115 aa11.25□□□□□ -0.61
USP43-202ENST00000570475 VPREB3Q9UKI3 123 aa11.25□□□□□ -0.61
USP43-202ENST00000570475 TRIAP1O43715 76 aa11.24□□□□□ -0.61
USP43-202ENST00000570475 C11orf68Q9H3H3 251 aaKnown RBP11.24□□□□□ -0.61
USP43-202ENST00000570475 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
USP43-202ENST00000570475 CDIP1Q9H305 208 aa11.24□□□□□ -0.61
USP43-202ENST00000570475 RPL35AP18077 110 aaKnown RBP11.23□□□□□ -0.61
USP43-202ENST00000570475 RNF183Q96D59 192 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 Q9H8V8 135 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 TRGV2A0A075B6R0 118 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 FHL3Q13643 280 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 PRIMA1Q86XR5 153 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 TRBV6-5A0A0K0K1A5 114 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 TMEM262E9PQX1 116 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 LINC01619G3V211 115 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 UBE2L6O14933 153 aa11.23□□□□□ -0.61
USP43-202ENST00000570475 NXPH4O95158 308 aa11.22□□□□□ -0.61
USP43-202ENST00000570475 PEMTQ9UBM1 199 aa11.22□□□□□ -0.61
USP43-202ENST00000570475 H3BMM0 161 aa11.21□□□□□ -0.61
USP43-202ENST00000570475 UBE2WQ96B02 151 aa11.21□□□□□ -0.61
USP43-202ENST00000570475 TMEM263Q8WUH6 116 aaKnown RBP11.21□□□□□ -0.62
USP43-202ENST00000570475 ICOSQ9Y6W8 199 aa11.21□□□□□ -0.62
USP43-202ENST00000570475 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
USP43-202ENST00000570475 INSP01308 110 aa11.2□□□□□ -0.62
USP43-202ENST00000570475 SCGB1A1P11684 91 aa11.2□□□□□ -0.62
USP43-202ENST00000570475 MXRA5Q9NR99 2828 aa11.2□□□□□ -0.62
USP43-202ENST00000570475 B5MCH6 92 aa11.2□□□□□ -0.62
USP43-202ENST00000570475 C15orf53Q8NAA6 179 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms