RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 KRTAP26-1Q6PEX3 210 aa13.61□□□□□ -0.23
RPA1-202ENST00000570451 LRP1Q07954 4544 aaKnown RBP13.6□□□□□ -0.23
RPA1-202ENST00000570451 TMEM250H0YL14 139 aa13.6□□□□□ -0.23
RPA1-202ENST00000570451 UBE2L6O14933 153 aa13.6□□□□□ -0.23
RPA1-202ENST00000570451 CTRLP40313 264 aa13.6□□□□□ -0.23
RPA1-202ENST00000570451 CEBPGP53567 150 aa13.6□□□□□ -0.23
RPA1-202ENST00000570451 DGAT2L7PQ6IED9 249 aa13.6□□□□□ -0.23
RPA1-202ENST00000570451 C20orf203Q8NBC4 194 aa13.6□□□□□ -0.23
RPA1-202ENST00000570451 RNASE7Q9H1E1 156 aaKnown RBP13.6□□□□□ -0.23
RPA1-202ENST00000570451 RPP21Q9H633 154 aaKnown RBP13.6□□□□□ -0.23
RPA1-202ENST00000570451 IGLV4-60A0A075B6I1 120 aa13.59□□□□□ -0.23
RPA1-202ENST00000570451 KRTAP29-1A8MX34 341 aaPredicted RBP13.59□□□□□ -0.23
RPA1-202ENST00000570451 SRP19P09132 144 aaKnown RBP13.59□□□□□ -0.23
RPA1-202ENST00000570451 AMTP48728 403 aa13.59□□□□□ -0.23
RPA1-202ENST00000570451 SRSF3P84103 164 aaKnown RBP13.59□□□□□ -0.23
RPA1-202ENST00000570451 COMMD7Q86VX2 200 aa13.59□□□□□ -0.23
RPA1-202ENST00000570451 SMDT1Q9H4I9 107 aa13.59□□□□□ -0.23
RPA1-202ENST00000570451 PKHD1L1Q86WI1 4243 aa13.59□□□□□ -0.23
RPA1-202ENST00000570451 LINC00862A6NCI5 91 aa13.58□□□□□ -0.24
RPA1-202ENST00000570451 NDUFS6O75380 124 aaKnown RBP13.58□□□□□ -0.24
RPA1-202ENST00000570451 KRTAP10-4P60372 401 aaPredicted RBP13.58□□□□□ -0.24
RPA1-202ENST00000570451 COTL1Q14019 142 aa13.58□□□□□ -0.24
RPA1-202ENST00000570451 WDR73Q6P4I2 378 aa13.58□□□□□ -0.24
RPA1-202ENST00000570451 PGLYRP4Q96LB8 373 aa13.58□□□□□ -0.24
RPA1-202ENST00000570451 GFRA4Q9GZZ7 299 aa13.58□□□□□ -0.24
RPA1-202ENST00000570451 A0A1B0GUV1 79 aa13.57□□□□□ -0.24
RPA1-202ENST00000570451 K7EN84 100 aa13.57□□□□□ -0.24
RPA1-202ENST00000570451 C9orf163Q8N9P6 203 aa13.57□□□□□ -0.24
RPA1-202ENST00000570451 FAT3Q8TDW7 4589 aa13.57□□□□□ -0.24
RPA1-202ENST00000570451 TRAV8-4A0A0B4J246 113 aa13.56□□□□□ -0.24
RPA1-202ENST00000570451 TRAV26-2A0A0B4J265 109 aa13.56□□□□□ -0.24
RPA1-202ENST00000570451 hDV102S1A0JD36 115 aa13.56□□□□□ -0.24
RPA1-202ENST00000570451 C9JQL5 133 aa13.56□□□□□ -0.24
RPA1-202ENST00000570451 CLRN3Q8NCR9 226 aa13.56□□□□□ -0.24
RPA1-202ENST00000570451 OCC1Q8TAD7 63 aa13.56□□□□□ -0.24
RPA1-202ENST00000570451 RPL37AP61513 92 aaKnown RBP13.55□□□□□ -0.24
RPA1-202ENST00000570451 GATD1Q8NB37 220 aa13.55□□□□□ -0.24
RPA1-202ENST00000570451 UQCC3Q6UW78 93 aa13.54□□□□□ -0.24
RPA1-202ENST00000570451 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
RPA1-202ENST00000570451 CNFNQ9BYD5 112 aa13.54□□□□□ -0.24
RPA1-202ENST00000570451 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.54□□□□□ -0.24
RPA1-202ENST00000570451 IGKV3OR2-268A0A0C4DH90 116 aa13.53□□□□□ -0.24
RPA1-202ENST00000570451 ZNF727A8MUV8 499 aa13.52□□□□□ -0.25
RPA1-202ENST00000570451 PANO1I0J062 215 aa13.52□□□□□ -0.25
RPA1-202ENST00000570451 GTSF1Q8WW33 167 aa13.52□□□□□ -0.25
RPA1-202ENST00000570451 RPL39LQ96EH5 51 aaKnown RBP13.52□□□□□ -0.25
RPA1-202ENST00000570451 SMIM7Q9BQ49 75 aa13.52□□□□□ -0.25
RPA1-202ENST00000570451 AP5S1Q9NUS5 200 aa13.52□□□□□ -0.25
RPA1-202ENST00000570451 GATCO43716 136 aaKnown RBP13.51□□□□□ -0.25
RPA1-202ENST00000570451 FOXA3P55318 350 aaPredicted RBP13.51□□□□□ -0.25
RPA1-202ENST00000570451 SDIM1Q6ZPB5 146 aa13.51□□□□□ -0.25
RPA1-202ENST00000570451 CNBPP62633 177 aaKnown RBP13.5□□□□□ -0.25
RPA1-202ENST00000570451 FAM74A3Q4VXF1 159 aa13.5□□□□□ -0.25
RPA1-202ENST00000570451 AMMECR1LQ6DCA0 310 aa13.5□□□□□ -0.25
RPA1-202ENST00000570451 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.49□□□□□ -0.25
RPA1-202ENST00000570451 GAGE12HA6NDE8 117 aa13.49□□□□□ -0.25
RPA1-202ENST00000570451 IGHV3-64A0A075B6Q5 118 aa13.48□□□□□ -0.25
RPA1-202ENST00000570451 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.48□□□□□ -0.25
RPA1-202ENST00000570451 IGKV2-29A2NJV5 120 aaPredicted RBP13.48□□□□□ -0.25
RPA1-202ENST00000570451 RNASEKQ6P5S7 137 aaKnown RBP13.48□□□□□ -0.25
RPA1-202ENST00000570451 DPH3Q96FX2 82 aa13.48□□□□□ -0.25
RPA1-202ENST00000570451 OXTP01178 125 aa13.47□□□□□ -0.25
RPA1-202ENST00000570451 APCSP02743 223 aa13.47□□□□□ -0.25
RPA1-202ENST00000570451 A8MWL6 223 aa13.46□□□□□ -0.25
RPA1-202ENST00000570451 TMEM218A2RU14 115 aa13.45□□□□□ -0.26
RPA1-202ENST00000570451 SDHAF1A6NFY7 115 aa13.45□□□□□ -0.26
RPA1-202ENST00000570451 NCR2O95944 276 aa13.45□□□□□ -0.26
RPA1-202ENST00000570451 SLPIP03973 132 aa13.45□□□□□ -0.26
RPA1-202ENST00000570451 NDUFA5Q16718 116 aa13.45□□□□□ -0.26
RPA1-202ENST00000570451 TMEM241Q24JQ0 296 aa13.45□□□□□ -0.26
RPA1-202ENST00000570451 FAM231DQ6ZW35 169 aa13.45□□□□□ -0.26
RPA1-202ENST00000570451 BORCS7Q96B45 105 aa13.45□□□□□ -0.26
RPA1-202ENST00000570451 NAT8Q9UHE5 227 aa13.45□□□□□ -0.26
RPA1-202ENST00000570451 HNRNPA3P51991 378 aaKnown RBP13.44□□□□□ -0.26
RPA1-202ENST00000570451 CFAP161Q6P656 301 aa13.44□□□□□ -0.26
RPA1-202ENST00000570451 C15orf56Q8N910 161 aa13.44□□□□□ -0.26
RPA1-202ENST00000570451 F8W036 122 aa13.43□□□□□ -0.26
RPA1-202ENST00000570451 CHTF8P0CG12 524 aa13.43□□□□□ -0.26
RPA1-202ENST00000570451 FGF6P10767 208 aa13.43□□□□□ -0.26
RPA1-202ENST00000570451 PMCHP20382 165 aa13.43□□□□□ -0.26
RPA1-202ENST00000570451 HIGD2BQ4VC39 106 aa13.43□□□□□ -0.26
RPA1-202ENST00000570451 CHCHD10Q8WYQ3 142 aaPredicted RBP13.43□□□□□ -0.26
RPA1-202ENST00000570451 HMCN2Q8NDA2 5059 aa13.42□□□□□ -0.26
RPA1-202ENST00000570451 CIRBPQ14011 172 aaKnown RBP13.42□□□□□ -0.26
RPA1-202ENST00000570451 LINC01551Q86U37 167 aa13.42□□□□□ -0.26
RPA1-202ENST00000570451 SLC7A5P1Q8MH63 180 aa13.42□□□□□ -0.26
RPA1-202ENST00000570451 H7C423 109 aa13.41□□□□□ -0.26
RPA1-202ENST00000570451 I3L3M4 83 aa13.41□□□□□ -0.26
RPA1-202ENST00000570451 ADIRFQ15847 76 aa13.41□□□□□ -0.26
RPA1-202ENST00000570451 CT83Q5H943 113 aa13.41□□□□□ -0.26
RPA1-202ENST00000570451 RPL23P62829 140 aaKnown RBP13.4□□□□□ -0.26
RPA1-202ENST00000570451 TMEM101Q96IK0 257 aa13.4□□□□□ -0.26
RPA1-202ENST00000570451 A0A087WYN8 130 aa13.39□□□□□ -0.27
RPA1-202ENST00000570451 GAS8-AS1O95177 125 aa13.39□□□□□ -0.27
RPA1-202ENST00000570451 ADCYAP1P18509 176 aa13.39□□□□□ -0.27
RPA1-202ENST00000570451 SERTAD4-AS1Q5TG53 156 aa13.39□□□□□ -0.27
RPA1-202ENST00000570451 SPACA4Q8TDM5 124 aa13.39□□□□□ -0.27
RPA1-202ENST00000570451 RNF185Q96GF1 192 aa13.39□□□□□ -0.27
RPA1-202ENST00000570451 BTF3L4Q96K17 158 aa13.39□□□□□ -0.27
RPA1-202ENST00000570451 SEC11CQ9BY50 192 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms