RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	C1orf43	Q9BWL3	253 aa		12.06	□□□□□ -0.48
PKD1-238	ENST00000570150	KIAA1109	Q2LD37	5005 aa		12.05	□□□□□ -0.48
PKD1-238	ENST00000570150	PKD1	P98161	4303 aa		12.05	□□□□□ -0.48
PKD1-238	ENST00000570150	TRAV26-2	A0A0B4J265	109 aa		12.05	□□□□□ -0.48
PKD1-238	ENST00000570150	APCS	P02743	223 aa		12.05	□□□□□ -0.48
PKD1-238	ENST00000570150	PMCH	P20382	165 aa		12.05	□□□□□ -0.48
PKD1-238	ENST00000570150	IFITM2	Q01629	132 aa		12.05	□□□□□ -0.48
PKD1-238	ENST00000570150	ATRAID	Q6UW56	229 aa		12.05	□□□□□ -0.48
PKD1-238	ENST00000570150	IMMP2L	Q96T52	175 aa		12.05	□□□□□ -0.48
PKD1-238	ENST00000570150	DYNC1H1	Q14204	4646 aa	Known RBP	12.04	□□□□□ -0.48
PKD1-238	ENST00000570150	TRAV8-4	A0A0B4J246	113 aa		12.04	□□□□□ -0.48
PKD1-238	ENST00000570150	TMEM218	A2RU14	115 aa		12.04	□□□□□ -0.48
PKD1-238	ENST00000570150	C14orf177	Q52M58	125 aa		12.04	□□□□□ -0.48
PKD1-238	ENST00000570150	MPV17L2	Q567V2	206 aa		12.04	□□□□□ -0.48
PKD1-238	ENST00000570150	FAM104B	Q5XKR9	115 aa		12.04	□□□□□ -0.48
PKD1-238	ENST00000570150	SEC11C	Q9BY50	192 aa		12.04	□□□□□ -0.48
PKD1-238	ENST00000570150	CTDSP1	Q9GZU7	261 aa		12.04	□□□□□ -0.48
PKD1-238	ENST00000570150	DNAH11	Q96DT5	4516 aa		12.03	□□□□□ -0.48
PKD1-238	ENST00000570150	IGKV2D-24	A0A075B6R9	120 aa		12.03	□□□□□ -0.48
PKD1-238	ENST00000570150	VCY	O14598	125 aa		12.03	□□□□□ -0.48
PKD1-238	ENST00000570150	ZNF25	P17030	456 aa	Predicted RBP	12.03	□□□□□ -0.48
PKD1-238	ENST00000570150	CAMP	P49913	170 aa		12.03	□□□□□ -0.48
PKD1-238	ENST00000570150	RBX1	P62877	108 aa		12.03	□□□□□ -0.48
PKD1-238	ENST00000570150	AMN1	Q8IY45	258 aa		12.03	□□□□□ -0.48
PKD1-238	ENST00000570150	KIR2DL4	Q99706	377 aa		12.03	□□□□□ -0.48
PKD1-238	ENST00000570150	C20orf78	Q9BR46	151 aa		12.03	□□□□□ -0.48
PKD1-238	ENST00000570150	TRBV27	A0A0K0K1C4	114 aa		12.02	□□□□□ -0.49
PKD1-238	ENST00000570150	PHOX2A	O14813	284 aa		12.02	□□□□□ -0.49
PKD1-238	ENST00000570150	GAGE6	Q13070	117 aa		12.02	□□□□□ -0.49
PKD1-238	ENST00000570150	AMMECR1L	Q6DCA0	310 aa		12.02	□□□□□ -0.49
PKD1-238	ENST00000570150		Q8N976	141 aa		12.02	□□□□□ -0.49
PKD1-238	ENST00000570150	RPL39L	Q96EH5	51 aa	Known RBP	12.02	□□□□□ -0.49
PKD1-238	ENST00000570150	BTF3L4	Q96K17	158 aa		12.02	□□□□□ -0.49
PKD1-238	ENST00000570150	PRR34	Q9NV39	138 aa		12.02	□□□□□ -0.49
PKD1-238	ENST00000570150	CKS2	P33552	79 aa		12.01	□□□□□ -0.49
PKD1-238	ENST00000570150	RNF185	Q96GF1	192 aa		12.01	□□□□□ -0.49
PKD1-238	ENST00000570150	TMEM70	Q9BUB7	260 aa		12.01	□□□□□ -0.49
PKD1-238	ENST00000570150	TRBV24-1	A0A075B6N3	115 aa		12	□□□□□ -0.49
PKD1-238	ENST00000570150	TRAV9-1	A0A075B6T8	112 aa		12	□□□□□ -0.49
PKD1-238	ENST00000570150	FCER1G	P30273	86 aa		12	□□□□□ -0.49
PKD1-238	ENST00000570150	SUMO2	P61956	95 aa	Known RBP	12	□□□□□ -0.49
PKD1-238	ENST00000570150	RPL32	P62910	135 aa	Known RBP	12	□□□□□ -0.49
PKD1-238	ENST00000570150	COMMD7	Q86VX2	200 aa		12	□□□□□ -0.49
PKD1-238	ENST00000570150	TMEM18	Q96B42	140 aa		12	□□□□□ -0.49
PKD1-238	ENST00000570150	TMEM101	Q96IK0	257 aa		12	□□□□□ -0.49
PKD1-238	ENST00000570150		A0A1B0GXF2	115 aa		11.99	□□□□□ -0.49
PKD1-238	ENST00000570150	LRCOL1	A6NCL2	159 aa		11.99	□□□□□ -0.49
PKD1-238	ENST00000570150	CDK2AP2	O75956	126 aa		11.99	□□□□□ -0.49
PKD1-238	ENST00000570150	MRPL54	Q6P161	138 aa	Known RBP	11.99	□□□□□ -0.49
PKD1-238	ENST00000570150		Q8N3U1	123 aa		11.99	□□□□□ -0.49
PKD1-238	ENST00000570150		Q8N814	137 aa		11.99	□□□□□ -0.49
PKD1-238	ENST00000570150	KRTAP17-1	Q9BYP8	105 aa		11.99	□□□□□ -0.49
PKD1-238	ENST00000570150	TMEM242	Q9NWH2	141 aa		11.99	□□□□□ -0.49
PKD1-238	ENST00000570150	LAMTOR2	Q9Y2Q5	125 aa		11.99	□□□□□ -0.49
PKD1-238	ENST00000570150	S100P	P25815	95 aa		11.98	□□□□□ -0.49
PKD1-238	ENST00000570150	POLR2K	P53803	58 aa	Known RBP	11.98	□□□□□ -0.49
PKD1-238	ENST00000570150	REG3A	Q06141	175 aa		11.98	□□□□□ -0.49
PKD1-238	ENST00000570150	LINC00269	Q8N2A0	174 aa		11.98	□□□□□ -0.49
PKD1-238	ENST00000570150	MRPL51	Q4U2R6	128 aa	Known RBP	11.97	□□□□□ -0.49
PKD1-238	ENST00000570150	ENHO	Q6UWT2	76 aa		11.97	□□□□□ -0.49
PKD1-238	ENST00000570150	ORMDL3	Q8N138	153 aa		11.97	□□□□□ -0.49
PKD1-238	ENST00000570150	IGLV5-52	A0A0A0MRZ9	124 aa		11.96	□□□□□ -0.49
PKD1-238	ENST00000570150	NDUFA5	Q16718	116 aa		11.96	□□□□□ -0.49
PKD1-238	ENST00000570150	C7orf77	A4D0Y5	90 aa		11.95	□□□□□ -0.5
PKD1-238	ENST00000570150	KRTAP10-2	P60368	255 aa		11.95	□□□□□ -0.5
PKD1-238	ENST00000570150	RNASEK	Q6P5S7	137 aa	Known RBP	11.95	□□□□□ -0.5
PKD1-238	ENST00000570150	GCSH	P23434	173 aa		11.94	□□□□□ -0.5
PKD1-238	ENST00000570150	RHEB	Q15382	184 aa		11.94	□□□□□ -0.5
PKD1-238	ENST00000570150	COX19	Q49B96	90 aa		11.94	□□□□□ -0.5
PKD1-238	ENST00000570150	NRAC	Q8N912	160 aa		11.94	□□□□□ -0.5
PKD1-238	ENST00000570150	CCL25	O15444	150 aa		11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	TNFRSF6B	O95407	300 aa		11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	TSHB	P01222	138 aa		11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	FGF6	P10767	208 aa		11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	ESD	P10768	282 aa		11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	RPS10	P46783	165 aa	Known RBP	11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	DGAT2L7P	Q6IED9	249 aa		11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	MRPL52	Q86TS9	123 aa	Known RBP	11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	C20orf203	Q8NBC4	194 aa		11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	CLRN3	Q8NCR9	226 aa		11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	OR5A1	Q8NGJ0	315 aa		11.93	□□□□□ -0.5
PKD1-238	ENST00000570150	CSDC2	Q9Y534	153 aa	Known RBP	11.93	□□□□□ -0.5
PKD1-238	ENST00000570150		D6R8Y8	96 aa		11.92	□□□□□ -0.5
PKD1-238	ENST00000570150	CFAP161	Q6P656	301 aa		11.92	□□□□□ -0.5
PKD1-238	ENST00000570150	TMEM136	Q6ZRR5	245 aa		11.92	□□□□□ -0.5
PKD1-238	ENST00000570150	RAB5A	P20339	215 aa		11.91	□□□□□ -0.5
PKD1-238	ENST00000570150	C10orf91	Q5T1B1	145 aa		11.91	□□□□□ -0.5
PKD1-238	ENST00000570150	BAALC	Q8WXS3	180 aa		11.91	□□□□□ -0.5
PKD1-238	ENST00000570150	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.91	□□□□□ -0.5
PKD1-238	ENST00000570150		K7EMI3	77 aa		11.9	□□□□□ -0.5
PKD1-238	ENST00000570150	ADCYAP1	P18509	176 aa		11.9	□□□□□ -0.5
PKD1-238	ENST00000570150	G0S2	P27469	103 aa		11.9	□□□□□ -0.5
PKD1-238	ENST00000570150	PRELID3A	Q96N28	172 aa		11.9	□□□□□ -0.5
PKD1-238	ENST00000570150	SMIM2	Q9BVW6	85 aa		11.9	□□□□□ -0.5
PKD1-238	ENST00000570150	IGLV4-60	A0A075B6I1	120 aa		11.89	□□□□□ -0.51
PKD1-238	ENST00000570150	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.89	□□□□□ -0.51
PKD1-238	ENST00000570150	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.89	□□□□□ -0.51
PKD1-238	ENST00000570150	SMKR1	H3BMG3	65 aa		11.89	□□□□□ -0.51
PKD1-238	ENST00000570150	HLA-DQA1	P01909	254 aa		11.89	□□□□□ -0.51
PKD1-238	ENST00000570150	TIMM21	Q9BVV7	248 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms