RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 F2Z2F3 143 aa8.04□□□□□ -1.12
RBFOX1-218ENST00000569889 S100A8P05109 93 aa8.04□□□□□ -1.12
RBFOX1-218ENST00000569889 LINC01559Q495D7 138 aa8.04□□□□□ -1.12
RBFOX1-218ENST00000569889 RASL11AQ6T310 242 aa8.04□□□□□ -1.12
RBFOX1-218ENST00000569889 BORCS7Q96B45 105 aa8.04□□□□□ -1.12
RBFOX1-218ENST00000569889 CHAC1Q9BUX1 264 aa8.04□□□□□ -1.12
RBFOX1-218ENST00000569889 UBR4Q5T4S7 5183 aa8.04□□□□□ -1.12
RBFOX1-218ENST00000569889 C19orf71A6NCJ1 209 aa8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 FOXA3P55318 350 aaPredicted RBP8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 Q0VG73 95 aa8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 GAGE6Q13070 117 aa8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 MPV17L2Q567V2 206 aa8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 SPANXN1Q5VSR9 72 aa8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 ENHOQ6UWT2 76 aa8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 NEXN-AS1Q8NBZ9 246 aa8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 TSKUQ8WUA8 353 aa8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 RPP21Q9H633 154 aaKnown RBP8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 NAT8BQ9UHF3 227 aa8.03□□□□□ -1.12
RBFOX1-218ENST00000569889 TRBV6-8A0A0A6YYG3 113 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 TRBV10-1A0A0K0K1A3 114 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 USP17L23D6RBM5 183 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 K7EN84 100 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 RAB4BP61018 213 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 WDR73Q6P4I2 378 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 ATRAIDQ6UW56 229 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 ATP5L2Q7Z4Y8 100 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 NUDT10Q8NFP7 164 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 NUDT11Q96G61 164 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 TPPP3Q9BW30 176 aa8.02□□□□□ -1.13
RBFOX1-218ENST00000569889 TRBV24-1A0A075B6N3 115 aa8.01□□□□□ -1.13
RBFOX1-218ENST00000569889 MGPP08493 103 aa8.01□□□□□ -1.13
RBFOX1-218ENST00000569889 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
RBFOX1-218ENST00000569889 SMIM27A0A1W2PRY6 76 aa8□□□□□ -1.13
RBFOX1-218ENST00000569889 SMIM17P0DL12 118 aa8□□□□□ -1.13
RBFOX1-218ENST00000569889 OR2D3Q8NGH3 330 aa8□□□□□ -1.13
RBFOX1-218ENST00000569889 CHCHD7Q9BUK0 85 aa8□□□□□ -1.13
RBFOX1-218ENST00000569889 V9GYV3 84 aa8□□□□□ -1.13
RBFOX1-218ENST00000569889 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
RBFOX1-218ENST00000569889 IGLV10-54A0A075B6I4 117 aa7.99□□□□□ -1.13
RBFOX1-218ENST00000569889 MT-ND6P03923 174 aa7.99□□□□□ -1.13
RBFOX1-218ENST00000569889 GZMBP10144 247 aa7.99□□□□□ -1.13
RBFOX1-218ENST00000569889 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
RBFOX1-218ENST00000569889 LINC00269Q8N2A0 174 aa7.99□□□□□ -1.13
RBFOX1-218ENST00000569889 DPH3Q96FX2 82 aa7.99□□□□□ -1.13
RBFOX1-218ENST00000569889 PRSS1P07477 247 aa7.98□□□□□ -1.13
RBFOX1-218ENST00000569889 RIGQ13278 110 aa7.98□□□□□ -1.13
RBFOX1-218ENST00000569889 NTM-AS1Q6ZSK4 140 aa7.98□□□□□ -1.13
RBFOX1-218ENST00000569889 SMIM15Q7Z3B0 74 aa7.98□□□□□ -1.13
RBFOX1-218ENST00000569889 RNASE7Q9H1E1 156 aaKnown RBP7.98□□□□□ -1.13
RBFOX1-218ENST00000569889 RBX1P62877 108 aa7.97□□□□□ -1.13
RBFOX1-218ENST00000569889 CACNG7P62955 275 aa7.97□□□□□ -1.13
RBFOX1-218ENST00000569889 TRBV25-1A0A075B6N4 114 aa7.96□□□□□ -1.14
RBFOX1-218ENST00000569889 A0A1B0GUT8 65 aa7.96□□□□□ -1.14
RBFOX1-218ENST00000569889 HIGD1CA8MV81 97 aa7.96□□□□□ -1.14
RBFOX1-218ENST00000569889 OR5AL1P0C617 328 aa7.96□□□□□ -1.14
RBFOX1-218ENST00000569889 KRTAP10-4P60372 401 aaPredicted RBP7.96□□□□□ -1.14
RBFOX1-218ENST00000569889 MIAQ16674 131 aa7.96□□□□□ -1.14
RBFOX1-218ENST00000569889 GNB1LQ9BYB4 327 aa7.96□□□□□ -1.14
RBFOX1-218ENST00000569889 SNAI2O43623 268 aa7.95□□□□□ -1.14
RBFOX1-218ENST00000569889 FER1L6-AS1Q8NA97 138 aa7.95□□□□□ -1.14
RBFOX1-218ENST00000569889 AP1S3Q96PC3 154 aa7.95□□□□□ -1.14
RBFOX1-218ENST00000569889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
RBFOX1-218ENST00000569889 LRP1Q07954 4544 aaKnown RBP7.95□□□□□ -1.14
RBFOX1-218ENST00000569889 IGHV1-24A0A0C4DH33 117 aa7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 IGKV3OR2-268A0A0C4DH90 116 aa7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 hDV102S1A0JD36 115 aa7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 HNRNPA3P51991 378 aaKnown RBP7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 PKIAP61925 76 aa7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 HBBP68871 147 aa7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 TMEM97Q5BJF2 176 aa7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 SERTAD4-AS1Q5TG53 156 aa7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 SSBP4Q9BWG4 385 aaPredicted RBP7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 CNFNQ9BYD5 112 aa7.94□□□□□ -1.14
RBFOX1-218ENST00000569889 COLCA2A8K830 154 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 PANO1I0J062 215 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 OXTP01178 125 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 TRGC1P0CF51 173 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 RAB5AP20339 215 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 REG3AQ06141 175 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 SUMO4Q6EEV6 95 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 CBLN2Q8IUK8 224 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 NUP35Q8NFH5 326 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 PLA2G2DQ9UNK4 145 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 KIF25-AS1Q9Y6Z4 181 aa7.93□□□□□ -1.14
RBFOX1-218ENST00000569889 CTRLP40313 264 aa7.92□□□□□ -1.14
RBFOX1-218ENST00000569889 DGAT2L7PQ6IED9 249 aa7.92□□□□□ -1.14
RBFOX1-218ENST00000569889 C9orf163Q8N9P6 203 aa7.92□□□□□ -1.14
RBFOX1-218ENST00000569889 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 C1orf196B1AJZ1 125 aa7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 M0QY20 66 aa7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 UBE2L6O14933 153 aa7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 PPP1R17O96001 155 aa7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 IGLC6P0CF74 106 aa7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 RPS10P46783 165 aaKnown RBP7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 KRTAP26-1Q6PEX3 210 aa7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 YPEL4Q96NS1 127 aa7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 TMEM243Q9BU79 118 aa7.91□□□□□ -1.14
RBFOX1-218ENST00000569889 AP5S1Q9NUS5 200 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms