RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 HECTD4Q9Y4D8 3996 aa6.42□□□□□ -1.38
UBR1-210ENST00000569337 SDHAF1A6NFY7 115 aa6.41□□□□□ -1.38
UBR1-210ENST00000569337 NTM-AS1Q6ZSK4 140 aa6.41□□□□□ -1.38
UBR1-210ENST00000569337 ATP6V0E2Q8NHE4 81 aa6.41□□□□□ -1.38
UBR1-210ENST00000569337 TMEM70Q9BUB7 260 aa6.41□□□□□ -1.38
UBR1-210ENST00000569337 ST20Q9HBF5 79 aa6.41□□□□□ -1.38
UBR1-210ENST00000569337 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.38
UBR1-210ENST00000569337 SUMO2P61956 95 aaKnown RBP6.4□□□□□ -1.38
UBR1-210ENST00000569337 TNP2Q05952 138 aa6.4□□□□□ -1.38
UBR1-210ENST00000569337 SH2D6Q7Z4S9 175 aa6.4□□□□□ -1.38
UBR1-210ENST00000569337 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.4□□□□□ -1.38
UBR1-210ENST00000569337 C20orf78Q9BR46 151 aa6.4□□□□□ -1.38
UBR1-210ENST00000569337 KRTAP1-5Q9BYS1 174 aa6.4□□□□□ -1.38
UBR1-210ENST00000569337 DNAH17Q9UFH2 4485 aa6.4□□□□□ -1.39
UBR1-210ENST00000569337 TRAV9-2A0A087WT02 112 aa6.39□□□□□ -1.39
UBR1-210ENST00000569337 TRBV27A0A0K0K1C4 114 aa6.39□□□□□ -1.39
UBR1-210ENST00000569337 LOC389332A0A1B0GUA5 103 aa6.39□□□□□ -1.39
UBR1-210ENST00000569337 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
UBR1-210ENST00000569337 BTF3P20290 206 aaKnown RBP6.39□□□□□ -1.39
UBR1-210ENST00000569337 IQCJQ1A5X6 159 aa6.39□□□□□ -1.39
UBR1-210ENST00000569337 DAZ4Q86SG3 579 aaKnown RBP6.39□□□□□ -1.39
UBR1-210ENST00000569337 GTSF1LQ9H1H1 148 aa6.39□□□□□ -1.39
UBR1-210ENST00000569337 DAZ3Q9NR90 486 aaKnown RBP6.39□□□□□ -1.39
UBR1-210ENST00000569337 LAMTOR2Q9Y2Q5 125 aa6.39□□□□□ -1.39
UBR1-210ENST00000569337 I3L3M4 83 aa6.38□□□□□ -1.39
UBR1-210ENST00000569337 PPP1R17O96001 155 aa6.38□□□□□ -1.39
UBR1-210ENST00000569337 TSHBP01222 138 aa6.38□□□□□ -1.39
UBR1-210ENST00000569337 IFI27P40305 119 aaPredicted RBP6.38□□□□□ -1.39
UBR1-210ENST00000569337 RPL32P62910 135 aaKnown RBP6.38□□□□□ -1.39
UBR1-210ENST00000569337 C18orf32Q8TCD1 76 aa6.38□□□□□ -1.39
UBR1-210ENST00000569337 SMIM2Q9BVW6 85 aa6.38□□□□□ -1.39
UBR1-210ENST00000569337 VCYO14598 125 aa6.37□□□□□ -1.39
UBR1-210ENST00000569337 TCAPO15273 167 aa6.37□□□□□ -1.39
UBR1-210ENST00000569337 PMCHP20382 165 aa6.37□□□□□ -1.39
UBR1-210ENST00000569337 TIRAPP58753 221 aa6.37□□□□□ -1.39
UBR1-210ENST00000569337 WFDC10BQ8IUB3 73 aa6.37□□□□□ -1.39
UBR1-210ENST00000569337 Q8N8P6 123 aa6.37□□□□□ -1.39
UBR1-210ENST00000569337 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
UBR1-210ENST00000569337 MAP1LC3AQ9H492 121 aa6.37□□□□□ -1.39
UBR1-210ENST00000569337 TRBV6-8A0A0A6YYG3 113 aa6.36□□□□□ -1.39
UBR1-210ENST00000569337 K7EP13 123 aa6.36□□□□□ -1.39
UBR1-210ENST00000569337 LELP1Q5T871 98 aa6.36□□□□□ -1.39
UBR1-210ENST00000569337 Q8N3U1 123 aa6.36□□□□□ -1.39
UBR1-210ENST00000569337 CHCHD7Q9BUK0 85 aa6.36□□□□□ -1.39
UBR1-210ENST00000569337 TRAV8-6A0A0B4J262 113 aa6.35□□□□□ -1.39
UBR1-210ENST00000569337 DNAH10OSP0CZ25 163 aa6.35□□□□□ -1.39
UBR1-210ENST00000569337 ESDP10768 282 aa6.35□□□□□ -1.39
UBR1-210ENST00000569337 COTL1Q14019 142 aa6.35□□□□□ -1.39
UBR1-210ENST00000569337 NFE4Q86UQ8 179 aa6.35□□□□□ -1.39
UBR1-210ENST00000569337 LINC00528Q8N1L1 170 aa6.35□□□□□ -1.39
UBR1-210ENST00000569337 TRBV25-1A0A075B6N4 114 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 LINC01546A6NGU7 62 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 C16orf90A8MZG2 172 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST1H2BKO60814 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST1H2BJP06899 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST1H2BOP23527 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST1H2BBP33778 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST1H2BDP58876 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 LINC00310P59036 64 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST1H2BCP62807 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST2H2BEQ16778 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.34□□□□□ -1.39
UBR1-210ENST00000569337 C10orf126Q8N4M7 172 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST1H2BHQ93079 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST1H2BNQ99877 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 HIST1H2BMQ99879 126 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 PKD1P98161 4303 aa6.34□□□□□ -1.39
UBR1-210ENST00000569337 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.33□□□□□ -1.4
UBR1-210ENST00000569337 IGHV1-24A0A0C4DH33 117 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 IGKV2-29A2NJV5 120 aaPredicted RBP6.33□□□□□ -1.4
UBR1-210ENST00000569337 NUPR1O60356 82 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 AMTP48728 403 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 Q0VG73 95 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 GAGE6Q13070 117 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 TMEM97Q5BJF2 176 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 Q6ZRN7 208 aaPredicted RBP6.33□□□□□ -1.4
UBR1-210ENST00000569337 SPATA12Q7Z6I5 190 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 NIT1Q86X76 327 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 PRSS3P2Q8NHM4 247 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 KIR2DL4Q99706 377 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 TMEM243Q9BU79 118 aa6.33□□□□□ -1.4
UBR1-210ENST00000569337 NXT2Q9NPJ8 142 aaKnown RBP6.33□□□□□ -1.4
UBR1-210ENST00000569337 PKHD1P08F94 4074 aa6.32□□□□□ -1.4
UBR1-210ENST00000569337 EREGO14944 169 aa6.32□□□□□ -1.4
UBR1-210ENST00000569337 LINC00614P0C842 121 aa6.32□□□□□ -1.4
UBR1-210ENST00000569337 FCER1GP30273 86 aa6.32□□□□□ -1.4
UBR1-210ENST00000569337 RPL39P62891 51 aaKnown RBP6.32□□□□□ -1.4
UBR1-210ENST00000569337 LAGE3Q14657 143 aa6.32□□□□□ -1.4
UBR1-210ENST00000569337 LINC01556Q5JQF7 62 aa6.32□□□□□ -1.4
UBR1-210ENST00000569337 CHCHD5Q9BSY4 110 aa6.32□□□□□ -1.4
UBR1-210ENST00000569337 HERC2O95714 4834 aa6.32□□□□□ -1.4
UBR1-210ENST00000569337 KIAA1109Q2LD37 5005 aa6.32□□□□□ -1.4
UBR1-210ENST00000569337 A0A096LNJ9 63 aa6.31□□□□□ -1.4
UBR1-210ENST00000569337 C1orf196B1AJZ1 125 aa6.31□□□□□ -1.4
UBR1-210ENST00000569337 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
UBR1-210ENST00000569337 IGHV3-33P01772 117 aa6.31□□□□□ -1.4
UBR1-210ENST00000569337 IGHV3-30-3P0DP02 117 aa6.31□□□□□ -1.4
UBR1-210ENST00000569337 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
UBR1-210ENST00000569337 PMCHL1Q16048 86 aa6.31□□□□□ -1.4
UBR1-210ENST00000569337 MPV17L2Q567V2 206 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms