RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 TRAV4A0A0B4J268 109 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 C20orf202A1L168 122 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 LINC01549A6NIU2 74 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 SYS1-DBNDD2H3BUS1 97 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 I3L3M4 83 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 GAGE7O76087 117 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 IGHV3-53P01767 116 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 GAGE12FP0CL80 117 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 GAGE12GP0CL81 117 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 GAGE12IP0CL82 117 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 IGHV4-30-4P0DP06 118 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 EGFEM1PQ0D2K5 195 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 Q6ZTI0 123 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 LINC00173Q6ZV60 143 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 SPATA12Q7Z6I5 190 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 PRR26Q8N8Z3 221 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 IFI27L1Q96BM0 104 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 DNAJC30Q96LL9 226 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 KIR2DL4Q99706 377 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 EDA2RQ9HAV5 297 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 WNK1Q9H4A3 2382 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 A0A096LNJ9 63 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 TRBV27A0A0K0K1C4 114 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 PLAC8L1A1L4L8 177 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 SDHAF1A6NFY7 115 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 GAGE10A6NGK3 116 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 A8MZ25 164 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 ATP5LO75964 103 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 PRSS1P07477 247 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 EMP1P54849 157 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 OR11H2Q8NH07 326 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 SCGB3A1Q96QR1 104 aa4.37□□□□□ -1.71
CAPN3-218ENST00000568153 PCP4L1A6NKN8 68 aa4.36□□□□□ -1.71
CAPN3-218ENST00000568153 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.36□□□□□ -1.71
CAPN3-218ENST00000568153 TEX43Q6ZNM6 134 aa4.36□□□□□ -1.71
CAPN3-218ENST00000568153 ZNF664Q8N3J9 261 aa4.36□□□□□ -1.71
CAPN3-218ENST00000568153 Q8N976 141 aa4.36□□□□□ -1.71
CAPN3-218ENST00000568153 TOMM6Q96B49 74 aa4.36□□□□□ -1.71
CAPN3-218ENST00000568153 RNF183Q96D59 192 aa4.36□□□□□ -1.71
CAPN3-218ENST00000568153 ZNF479Q96JC4 524 aa4.36□□□□□ -1.71
CAPN3-218ENST00000568153 JMJD1CQ15652 2540 aa4.36□□□□□ -1.71
CAPN3-218ENST00000568153 AGRNO00468 2067 aa4.36□□□□□ -1.71
CAPN3-218ENST00000568153 TRAV9-2A0A087WT02 112 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 TRGV4A0A0C4DH28 118 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 TRBV10-1A0A0K0K1A3 114 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 LYRM9A8MSI8 78 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 G3V4G9 280 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 H0Y8G0 127 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 P0DMU3 169 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 FAM231AP0DMU4 169 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 FAM231CP0DMU5 169 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 DEFB130BP0DP73 79 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 DEFB130AP0DP74 79 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 MIFP14174 115 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 NANOS2P60321 138 aaKnown RBP4.35□□□□□ -1.71
CAPN3-218ENST00000568153 PKIAP61925 76 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 RPL36AP83881 106 aaKnown RBP4.35□□□□□ -1.71
CAPN3-218ENST00000568153 RHOHQ15669 191 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 DEFB135Q30KP9 77 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 SERTAD4-AS1Q5TG53 156 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 LINC01545Q5VT33 79 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 LGALS9CQ6DKI2 356 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 C2orf66Q6UXQ4 117 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 Q6ZN92 141 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 NEGR1Q7Z3B1 354 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 ERASQ7Z444 233 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 NEXN-AS1Q8NBZ9 246 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 TMEM141Q96I45 108 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 C18orf15Q96N68 181 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 VAMP8Q9BV40 100 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 CYSLTR1Q9Y271 337 aa4.35□□□□□ -1.71
CAPN3-218ENST00000568153 FBN1P35555 2871 aaKnown RBP4.34□□□□□ -1.71
CAPN3-218ENST00000568153 TRBV7-3A0A075B6L6 115 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 TRBV6-4A0A1B0GX49 114 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 KRTAP29-1A8MX34 341 aaPredicted RBP4.34□□□□□ -1.71
CAPN3-218ENST00000568153 HSBP1L1C9JCN9 74 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 TSTD3H0UI37 97 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 TSHBP01222 138 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 SPART-AS1P0CW21 52 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 LINC00612Q8N6U2 182 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 SLC25A29Q8N8R3 303 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 ZNRF2Q8NHG8 242 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 DEFB104AQ8WTQ1 72 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 PRADC1Q9BSG0 188 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 Q9UF83 564 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 HHLA3Q9XRX5 114 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.71
CAPN3-218ENST00000568153 MUC4Q99102 2169 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 A0A087WX48 190 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 TRAV12-1A0A0B4J245 112 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 IGHV4-28A0A0C4DH34 117 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 K7EQD1 137 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 COTL1Q14019 142 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 SPATA45Q537H7 98 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 DAZ4Q86SG3 579 aaKnown RBP4.33□□□□□ -1.72
CAPN3-218ENST00000568153 ATOH7Q8N100 152 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 C20orf203Q8NBC4 194 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 PHLDA1Q8WV24 401 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-218ENST00000568153 PRO1933Q9H354 126 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms