RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	LINC00305	Q7Z4B0	112 aa		3.61	□□□□□ -1.83
CBFB-208	ENST00000567947	C5orf38	Q86SI9	138 aa		3.61	□□□□□ -1.83
CBFB-208	ENST00000567947	SLC25A29	Q8N8R3	303 aa		3.61	□□□□□ -1.83
CBFB-208	ENST00000567947	FGFBP3	Q8TAT2	258 aa		3.61	□□□□□ -1.83
CBFB-208	ENST00000567947	SRSF12	Q8WXF0	261 aa	Known RBP	3.61	□□□□□ -1.83
CBFB-208	ENST00000567947	MCRIP2	Q9BUT9	160 aa	Known RBP	3.61	□□□□□ -1.83
CBFB-208	ENST00000567947		Q9H3A6	140 aa		3.61	□□□□□ -1.83
CBFB-208	ENST00000567947	LINC00574	Q9H8X3	128 aa		3.61	□□□□□ -1.83
CBFB-208	ENST00000567947	DYNLRB1	Q9NP97	96 aa		3.61	□□□□□ -1.83
CBFB-208	ENST00000567947	FBN3	Q75N90	2809 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	IGLV2-18	A0A075B6J9	118 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	IGHV4-4	A0A075B6R2	117 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	TRAV8-1	A0A0A6YYK1	113 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	TRAV40	A0A0B4J280	105 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	IQCF6	A8MYZ5	107 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	BCE1	O60756	84 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	COX6C	P09669	75 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	KRTAP5-9	P26371	169 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	MRPS36	P82909	103 aa	Known RBP	3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	LINC01620	Q4KN68	170 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	PATE2	Q6UY27	113 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	IL17REL	Q6ZVW7	336 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	GTSCR1	Q86UQ5	136 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	MDP1	Q86V88	176 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	MAPKAPK5-AS1	Q8N8E1	139 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	PLEKHB2	Q96CS7	222 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	SRSF8	Q9BRL6	282 aa	Known RBP	3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	NDUFA4L2	Q9NRX3	87 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	CALY	Q9NYX4	217 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	MRPL35	Q9NZE8	188 aa	Known RBP	3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	TENM1	Q9UKZ4	2725 aa		3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	TET2	Q6N021	2002 aa	Predicted RBP	3.6	□□□□□ -1.83
CBFB-208	ENST00000567947	DSCAML1	Q8TD84	2053 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	PKD1L1	Q8TDX9	2849 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947		A0A0J9YY99	117 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	SDHAF1	A6NFY7	115 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947		J3QLI3	93 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947		M0R1B8	84 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	NDUFC2	O95298	119 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	IGHV3-30	P01768	117 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	IGHV3-33	P01772	117 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	CGB3	P0DN86	165 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	CGB7	P0DN87	165 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	IGHV3-30-5	P0DP03	117 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	PYY	P10082	97 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	CCL8	P80075	99 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	TMEM155	Q4W5P6	130 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	FAM201A	Q5SY85	155 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	LYZL1	Q6UWQ5	148 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	SCGB1D4	Q6XE38	83 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	ZFP2	Q6ZN57	461 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	DAND5	Q8N907	189 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	C8orf31	Q8N9H6	132 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	UBALD1	Q8TB05	177 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	TMEM167A	Q8TBQ9	72 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	DPH3	Q96FX2	82 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	EDA2R	Q9HAV5	297 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	SMAD5-AS1	Q9Y6J3	95 aa		3.59	□□□□□ -1.83
CBFB-208	ENST00000567947	IGKV1D-37	A0A075B6S9	117 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	LOC389332	A0A1B0GUA5	103 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	C11orf86	A6NJI1	115 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	ZNF815P	A8K554	130 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	EPM2A	B3EWF7	344 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947		B4DSR2	109 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947		M0R381	172 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	LY6G6D	O95868	133 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	IGHV3-9	P01782	118 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	LMO4	P61968	165 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	SPINK9	Q5DT21	86 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947		Q6ZQT7	251 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	TOMM6	Q96B49	74 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	RNF185	Q96GF1	192 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	METTL26	Q96S19	204 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	AGPAT4-IT1	Q9H0P7	198 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	GNG12	Q9UBI6	72 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	LAMTOR3	Q9UHA4	124 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	SELENOK	Q9Y6D0	94 aa		3.58	□□□□□ -1.84
CBFB-208	ENST00000567947	TRBV19	A0A075B6N1	114 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	IGHV4-30-2	A0A087WSY4	118 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	TRAV3	A0A0B4J244	114 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	FAM236A	A0A1B0GUQ0	79 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	FAM236B	A0A1B0GV22	79 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	NDUFAF8	A1L188	74 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	RBAKDN	A6NC62	111 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947		H3BVH4	76 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	RS1	O15537	224 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	INAFM2	P0DMQ5	153 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	IGHV4-31	P0DP07	118 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	GNG5	P63218	68 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	ZNF56	Q15929	161 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	SVEP1	Q4LDE5	3571 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	FAM222A	Q5U5X8	452 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	C2orf82	Q6UX34	121 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	NBEAL1	Q6ZS30	2694 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	PRNT	Q86SH4	94 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	SERP2	Q8N6R1	65 aa		3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	KLF14	Q8TD94	323 aa	Predicted RBP	3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	TMEM263	Q8WUH6	116 aa	Known RBP	3.57	□□□□□ -1.84
CBFB-208	ENST00000567947	TMEM141	Q96I45	108 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms