RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 BLOC1S1P78537 153 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 IQCJQ1A5X6 159 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 C14orf177Q52M58 125 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 SUMO4Q6EEV6 95 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 WDR73Q6P4I2 378 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 LYZL1Q6UWQ5 148 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 ENHOQ6UWT2 76 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 ALKAL2Q6UX46 152 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 Q6ZSA8 131 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 NTM-AS1Q6ZSK4 140 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 C15orf54Q8N8G6 183 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 NUDT10Q8NFP7 164 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 LYPD6BQ8NI32 183 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 BAALCQ8WXS3 180 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 NUDT11Q96G61 164 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 CHCHD5Q9BSY4 110 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 CNFNQ9BYD5 112 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 DPH3P1Q9H4G8 78 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 RPP21Q9H633 154 aaKnown RBP3.15□□□□□ -1.91
CLK3-219ENST00000567805 IGHV1-24A0A0C4DH33 117 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 K7EN84 100 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 SMR3BP02814 79 aaPredicted RBP3.14□□□□□ -1.91
CLK3-219ENST00000567805 INAFM2P0DMQ5 153 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 NTF3P20783 257 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 HAMPP81172 84 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 SRSF3P84103 164 aaKnown RBP3.14□□□□□ -1.91
CLK3-219ENST00000567805 TWIST1Q15672 202 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 MIAQ16674 131 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 RASL11AQ6T310 242 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 OCC1Q8TAD7 63 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 PGLYRP4Q96LB8 373 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 RNASE7Q9H1E1 156 aaKnown RBP3.14□□□□□ -1.91
CLK3-219ENST00000567805 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 PRR34Q9NV39 138 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 FAM30AQ9NZY2 134 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 MYCBP2O75592 4640 aa3.14□□□□□ -1.91
CLK3-219ENST00000567805 A0A1B0GUV1 79 aa3.13□□□□□ -1.91
CLK3-219ENST00000567805 NDUFS6O75380 124 aaKnown RBP3.13□□□□□ -1.91
CLK3-219ENST00000567805 HLA-DQA1P01909 254 aa3.13□□□□□ -1.91
CLK3-219ENST00000567805 NKX2-5P52952 324 aaPredicted RBP3.13□□□□□ -1.91
CLK3-219ENST00000567805 RBX1P62877 108 aa3.13□□□□□ -1.91
CLK3-219ENST00000567805 GAGE6Q13070 117 aa3.13□□□□□ -1.91
CLK3-219ENST00000567805 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
CLK3-219ENST00000567805 FAM231DQ6ZW35 169 aa3.13□□□□□ -1.91
CLK3-219ENST00000567805 SMIM15Q7Z3B0 74 aa3.13□□□□□ -1.91
CLK3-219ENST00000567805 LINC00269Q8N2A0 174 aa3.13□□□□□ -1.91
CLK3-219ENST00000567805 TMEM243Q9BU79 118 aa3.13□□□□□ -1.91
CLK3-219ENST00000567805 PKHD1L1Q86WI1 4243 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 TRAV8-4A0A0B4J246 113 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 A8MWL6 223 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 USP17L23D6RBM5 183 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 UBE2L6O14933 153 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 GATCO43716 136 aaKnown RBP3.12□□□□□ -1.91
CLK3-219ENST00000567805 TNFRSF6BO95407 300 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 CEBPGP53567 150 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 REG3AQ06141 175 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 COTL1Q14019 142 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 LINC01620Q4KN68 170 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 DGAT2L7PQ6IED9 249 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 CLPSL2Q6UWE3 100 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 TEX261Q6UWH6 196 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 SCXQ7RTU7 201 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 GATD1Q8NB37 220 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 C20orf203Q8NBC4 194 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 GTSF1Q8WW33 167 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 BORCS7Q96B45 105 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 SMIM7Q9BQ49 75 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 CHAC1Q9BUX1 264 aa3.12□□□□□ -1.91
CLK3-219ENST00000567805 EIF5A2Q9GZV4 153 aaKnown RBP3.12□□□□□ -1.91
CLK3-219ENST00000567805 IGLV4-60A0A075B6I1 120 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 IGLV10-54A0A075B6I4 117 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 TRAV26-2A0A0B4J265 109 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 FAM231BA6NCW3 169 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 ZNF727A8MUV8 499 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 NCR2O95944 276 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 PLA2G1BP04054 148 aaKnown RBP3.11□□□□□ -1.91
CLK3-219ENST00000567805 PRSS1P07477 247 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 AMTP48728 403 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 FOXA3P55318 350 aaPredicted RBP3.11□□□□□ -1.91
CLK3-219ENST00000567805 KRTAP26-1Q6PEX3 210 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 LINC01551Q86U37 167 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 GFRA4Q9GZZ7 299 aa3.11□□□□□ -1.91
CLK3-219ENST00000567805 HERC1Q15751 4861 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 TRBV6-5A0A0K0K1A5 114 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 A0A1B0GUT8 65 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 PRSS47A8MTI9 375 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 HIGD1CA8MV81 97 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 H7C423 109 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 I3L3M4 83 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 APCSP02743 223 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 SRP19P09132 144 aaKnown RBP3.1□□□□□ -1.91
CLK3-219ENST00000567805 CNBPP62633 177 aaKnown RBP3.1□□□□□ -1.91
CLK3-219ENST00000567805 FAM74A3Q4VXF1 159 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 C9orf163Q8N9P6 203 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 CIRBP-AS1Q8TBR5 109 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 DEFB104AQ8WTQ1 72 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 TSKUQ8WUA8 353 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 RPL39LQ96EH5 51 aaKnown RBP3.1□□□□□ -1.91
CLK3-219ENST00000567805 TMEM191AQ9H0A3 160 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms